Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
DUXBA0A1W2PPF3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DUXBA0A1W2PPF3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC20.49■□□□□ 0.87
DUXBA0A1W2PPF3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
DUXBA0A1W2PPF3 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
DUXBA0A1W2PPF3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.49■□□□□ 0.87
DUXBA0A1W2PPF3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 AC020928.2-201ENST00000588717 2197 ntBASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
DUXBA0A1W2PPF3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
DUXBA0A1W2PPF3 DUSP8P4-201ENST00000399538 1761 ntBASIC20.47■□□□□ 0.87
DUXBA0A1W2PPF3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
DUXBA0A1W2PPF3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.47■□□□□ 0.87
DUXBA0A1W2PPF3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.46■□□□□ 0.87
DUXBA0A1W2PPF3 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 SETD8P1-201ENST00000623146 1180 ntBASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
DUXBA0A1W2PPF3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
DUXBA0A1W2PPF3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
DUXBA0A1W2PPF3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 RARRES2P7-201ENST00000567349 469 ntBASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
DUXBA0A1W2PPF3 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
DUXBA0A1W2PPF3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.42■□□□□ 0.86
DUXBA0A1W2PPF3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.42■□□□□ 0.86
DUXBA0A1W2PPF3 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 AC092803.2-201ENST00000564287 1899 ntBASIC20.41■□□□□ 0.86
DUXBA0A1W2PPF3 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
DUXBA0A1W2PPF3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
DUXBA0A1W2PPF3 AL391121.1-201ENST00000607967 1349 ntBASIC20.4■□□□□ 0.86
DUXBA0A1W2PPF3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
DUXBA0A1W2PPF3 AC135983.2-203ENST00000454486 1613 ntBASIC20.39■□□□□ 0.86
DUXBA0A1W2PPF3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
DUXBA0A1W2PPF3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC20.37■□□□□ 0.85
DUXBA0A1W2PPF3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
DUXBA0A1W2PPF3 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
DUXBA0A1W2PPF3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DUXBA0A1W2PPF3 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DUXBA0A1W2PPF3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DUXBA0A1W2PPF3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DUXBA0A1W2PPF3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DUXBA0A1W2PPF3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DUXBA0A1W2PPF3 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
DUXBA0A1W2PPF3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.33■□□□□ 0.85
DUXBA0A1W2PPF3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.33■□□□□ 0.84
DUXBA0A1W2PPF3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DUXBA0A1W2PPF3 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
DUXBA0A1W2PPF3 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DUXBA0A1W2PPF3 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DUXBA0A1W2PPF3 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
DUXBA0A1W2PPF3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms