Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV9A0A0B4J1U6 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
TRBV9A0A0B4J1U6 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV9A0A0B4J1U6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV9A0A0B4J1U6 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV9A0A0B4J1U6 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV9A0A0B4J1U6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV9A0A0B4J1U6 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 AP002414.2-202ENST00000590929 1450 ntBASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV9A0A0B4J1U6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
TRBV9A0A0B4J1U6 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV9A0A0B4J1U6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.86■□□□□ 0.77
TRBV9A0A0B4J1U6 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.86■□□□□ 0.77
TRBV9A0A0B4J1U6 LINC01971-201ENST00000617888 1048 ntBASIC19.86■□□□□ 0.77
TRBV9A0A0B4J1U6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.86■□□□□ 0.77
TRBV9A0A0B4J1U6 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV9A0A0B4J1U6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
TRBV9A0A0B4J1U6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV9A0A0B4J1U6 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC19.85■□□□□ 0.77
TRBV9A0A0B4J1U6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV9A0A0B4J1U6 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV9A0A0B4J1U6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV9A0A0B4J1U6 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRBV9A0A0B4J1U6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV9A0A0B4J1U6 ZNRF2P2-203ENST00000454624 420 ntBASIC19.82■□□□□ 0.76
TRBV9A0A0B4J1U6 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV9A0A0B4J1U6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRBV9A0A0B4J1U6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TRBV9A0A0B4J1U6 ABHD17AP4-201ENST00000411545 909 ntBASIC19.8■□□□□ 0.76
TRBV9A0A0B4J1U6 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TRBV9A0A0B4J1U6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
TRBV9A0A0B4J1U6 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
TRBV9A0A0B4J1U6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV9A0A0B4J1U6 AC110285.7-201ENST00000624417 1536 ntBASIC19.79■□□□□ 0.76
TRBV9A0A0B4J1U6 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV9A0A0B4J1U6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.79■□□□□ 0.76
TRBV9A0A0B4J1U6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV9A0A0B4J1U6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV9A0A0B4J1U6 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV9A0A0B4J1U6 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC19.77■□□□□ 0.76
TRBV9A0A0B4J1U6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC19.77■□□□□ 0.76
TRBV9A0A0B4J1U6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.77■□□□□ 0.76
TRBV9A0A0B4J1U6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRBV9A0A0B4J1U6 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
TRBV9A0A0B4J1U6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 PEX7-203ENST00000541292 945 ntTSL 5 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L11-201ENST00000611504 1267 ntBASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L12-201ENST00000614593 1267 ntBASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L14-201ENST00000621227 1267 ntBASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 CHML-204ENST00000638121 920 ntTSL 2 BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV9A0A0B4J1U6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L13-201ENST00000554103 1267 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L15-201ENST00000611059 1267 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L23-201ENST00000615195 1269 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L24-201ENST00000617576 1269 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L22-201ENST00000618238 1269 ntBASIC19.75■□□□□ 0.75
TRBV9A0A0B4J1U6 DUX4L20-201ENST00000619712 1269 ntBASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms