RNA–Protein interactions for RNA: YOL129W

VPS68, Transcript of Vacuolar membrane protein of unknown function, yeastyeast

Gene VPS68, Length 555 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS68YOL129W MTC1P47018 478 aaKnown RBP16.11■□□□□ 0.17
VPS68YOL129W DRS1P32892 752 aaKnown RBP15.95■□□□□ 0.14
VPS68YOL129W BFR2Q06631 534 aaKnown RBP13.68□□□□□ -0.22
VPS68YOL129W DIP2Q12220 943 aaPredicted RBP13.63□□□□□ -0.23
VPS68YOL129W FAP1P53971 965 aa13.44□□□□□ -0.26
VPS68YOL129W AVT3P36062 692 aa13.42□□□□□ -0.26
VPS68YOL129W ISW2Q08773 1120 aa13.09□□□□□ -0.31
VPS68YOL129W PRI1P10363 409 aa13.04□□□□□ -0.32
VPS68YOL129W RPG1P38249 964 aaKnown RBP12.97□□□□□ -0.33
VPS68YOL129W RSE1Q04693 1361 aaKnown RBP12.91□□□□□ -0.34
VPS68YOL129W AAD16Q02895 342 aa12.82□□□□□ -0.36
VPS68YOL129W TFA1P36100 482 aa12.7□□□□□ -0.38
VPS68YOL129W PRY3P47033 881 aa12.61□□□□□ -0.39
VPS68YOL129W RPL17AP05740 184 aaKnown RBP12.48□□□□□ -0.41
VPS68YOL129W RPL17BP46990 184 aaKnown RBP12.48□□□□□ -0.41
VPS68YOL129W TSR3Q12094 313 aaKnown RBP12.4□□□□□ -0.42
VPS68YOL129W REB1P21538 810 aa12.31□□□□□ -0.44
VPS68YOL129W SPT21P35209 758 aa12.04□□□□□ -0.48
VPS68YOL129W YCK3P39962 524 aa12.01□□□□□ -0.49
VPS68YOL129W MRPL32P25348 183 aa11.85□□□□□ -0.51
VPS68YOL129W HAA1Q12753 694 aaKnown RBP11.81□□□□□ -0.52
VPS68YOL129W RIM101P33400 625 aa11.77□□□□□ -0.53
VPS68YOL129W YKR023WP36119 530 aaKnown RBP11.68□□□□□ -0.54
VPS68YOL129W CDC27P38042 758 aa11.52□□□□□ -0.57
VPS68YOL129W HOP09932 586 aa11.45□□□□□ -0.58
VPS68YOL129W OXP1P28273 1286 aa11.44□□□□□ -0.58
VPS68YOL129W TFC8Q12308 588 aa11.43□□□□□ -0.58
VPS68YOL129W DCD1P06773 312 aa11.41□□□□□ -0.58
VPS68YOL129W PTP3P40048 928 aa11.25□□□□□ -0.61
VPS68YOL129W YAH1Q12184 172 aaKnown RBP11.23□□□□□ -0.61
VPS68YOL129W YIL055CP40523 627 aaKnown RBP11.19□□□□□ -0.62
VPS68YOL129W SSP1P38871 571 aa11.14□□□□□ -0.63
VPS68YOL129W BCH2P36122 765 aa11.09□□□□□ -0.63
VPS68YOL129W YGL015CP33199 130 aa11.08□□□□□ -0.64
VPS68YOL129W YLR271WQ06152 274 aa11.07□□□□□ -0.64
VPS68YOL129W RSM7P47150 247 aa11.05□□□□□ -0.64
VPS68YOL129W MAP2P38174 421 aaKnown RBP11.03□□□□□ -0.64
VPS68YOL129W UBP10P53874 792 aaPredicted RBP11□□□□□ -0.65
VPS68YOL129W SCY1P53009 804 aa10.96□□□□□ -0.65
VPS68YOL129W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.93□□□□□ -0.66 RIP-Chip
VPS68YOL129W AI2P03876 854 aa10.89□□□□□ -0.67
VPS68YOL129W EPS1P40557 701 aa10.89□□□□□ -0.67
VPS68YOL129W BDF1P35817 686 aa10.81□□□□□ -0.68
VPS68YOL129W PSD2P53037 1138 aaKnown RBP10.8□□□□□ -0.68
VPS68YOL129W BBC1P47068 1157 aa10.79□□□□□ -0.68
VPS68YOL129W MGA2P40578 1113 aa10.76□□□□□ -0.69
VPS68YOL129W CST9Q06032 482 aa10.76□□□□□ -0.69
VPS68YOL129W SLX5P32828 619 aaKnown RBP10.74□□□□□ -0.69
VPS68YOL129W MRM1P25270 412 aa10.57□□□□□ -0.72
VPS68YOL129W TIF4632P39936 914 aaKnown RBP10.5□□□□□ -0.73
VPS68YOL129W RCR1P38212 213 aa10.43□□□□□ -0.74
VPS68YOL129W TGL3P40308 642 aa10.43□□□□□ -0.74
VPS68YOL129W DMA1P38823 416 aa10.4□□□□□ -0.74
VPS68YOL129W RQC2Q12532 1038 aaKnown RBP10.38□□□□□ -0.75
VPS68YOL129W RTG3P38165 486 aa10.36□□□□□ -0.75
VPS68YOL129W RAM2P29703 316 aa10.31□□□□□ -0.76
VPS68YOL129W VPS29P38759 282 aa10.31□□□□□ -0.76
VPS68YOL129W NSR1P27476 414 aaKnown RBP RIP-Chip data10.28□□□□□ -0.76not detected
VPS68YOL129W YAP5P40574 245 aa10.21□□□□□ -0.77
VPS68YOL129W YOR238WQ08634 303 aa10.21□□□□□ -0.77
VPS68YOL129W STS1P38637 319 aa10.2□□□□□ -0.78
VPS68YOL129W YMR1P47147 688 aaKnown RBP RIP-Chip data10.2□□□□□ -0.78not detected
VPS68YOL129W YFR006WP43590 535 aa10.17□□□□□ -0.78
VPS68YOL129W PIB1Q06651 286 aa10.17□□□□□ -0.78
VPS68YOL129W DBP1P24784 617 aaKnown RBP10.16□□□□□ -0.78
VPS68YOL129W MAK11P20484 414 aaKnown RBP10.14□□□□□ -0.79
VPS68YOL129W MST1P07236 462 aa10.12□□□□□ -0.79
VPS68YOL129W COQ8P27697 501 aa10□□□□□ -0.81
VPS68YOL129W VMA1P17255 1071 aaKnown RBP9.99□□□□□ -0.81
VPS68YOL129W EDS1P38073 919 aa9.99□□□□□ -0.81
VPS68YOL129W SET1P38827 1080 aaKnown RBP9.99□□□□□ -0.81
VPS68YOL129W MIF2P35201 549 aa9.97□□□□□ -0.81
VPS68YOL129W GTT3P39996 337 aa9.95□□□□□ -0.82
VPS68YOL129W SAS10Q12136 610 aaPredicted RBP9.89□□□□□ -0.83
VPS68YOL129W PTC3P34221 468 aaKnown RBP9.88□□□□□ -0.83
VPS68YOL129W SAM3Q08986 587 aa9.88□□□□□ -0.83
VPS68YOL129W YBL029C-AQ3E756 94 aa9.87□□□□□ -0.83
VPS68YOL129W WSC3Q12215 556 aa9.86□□□□□ -0.83
VPS68YOL129W YOL036WQ08206 761 aa9.84□□□□□ -0.83
VPS68YOL129W YPR148CQ06523 435 aa9.83□□□□□ -0.84
VPS68YOL129W NOP53Q12080 455 aaKnown RBP9.81□□□□□ -0.84
VPS68YOL129W UBP9P39967 754 aa9.8□□□□□ -0.84
VPS68YOL129W SET4P42948 560 aa9.8□□□□□ -0.84
VPS68YOL129W BUD31P25337 157 aaPredicted RBP9.79□□□□□ -0.84
VPS68YOL129W VNX1P42839 908 aa9.78□□□□□ -0.84
VPS68YOL129W GYP5Q12344 894 aa9.77□□□□□ -0.85
VPS68YOL129W IFH1P39520 1085 aa9.76□□□□□ -0.85
VPS68YOL129W VPS70P47161 811 aa9.76□□□□□ -0.85
VPS68YOL129W GRE2Q12068 342 aaKnown RBP9.76□□□□□ -0.85
VPS68YOL129W MSB4Q12317 492 aa9.75□□□□□ -0.85
VPS68YOL129W ATH1P48016 1211 aa9.74□□□□□ -0.85
VPS68YOL129W GUT1P32190 709 aa9.7□□□□□ -0.86
VPS68YOL129W DCW1P36091 449 aa9.7□□□□□ -0.86
VPS68YOL129W TIF11P38912 153 aaKnown RBP9.67□□□□□ -0.86
VPS68YOL129W SPP1Q03012 353 aa9.67□□□□□ -0.86
VPS68YOL129W ABP1P15891 592 aaKnown RBP9.66□□□□□ -0.86
VPS68YOL129W SOL3P38858 249 aa9.65□□□□□ -0.86
VPS68YOL129W TRP5P00931 707 aaKnown RBP9.64□□□□□ -0.87
VPS68YOL129W HTA1P04911 132 aaKnown RBP9.63□□□□□ -0.87
VPS68YOL129W HTA2P04912 132 aa9.63□□□□□ -0.87
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms