RNA–Protein interactions for RNA: YDR541C

YDR541C, Transcript of Putative dihydrokaempferol 4-reductase, yeastyeast

Gene YDR541C, Length 1,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR541CYDR541C MTC1P47018 478 aaKnown RBP17.82■□□□□ 0.44
YDR541CYDR541C DRS1P32892 752 aaKnown RBP16.6■□□□□ 0.25
YDR541CYDR541C FAP1P53971 965 aa16.17■□□□□ 0.18
YDR541CYDR541C PRY3P47033 881 aa15.18■□□□□ 0.02
YDR541CYDR541C PRI1P10363 409 aa15.05■□□□□ -0
YDR541CYDR541C AAD16Q02895 342 aa14.99□□□□□ -0.01
YDR541CYDR541C ISW2Q08773 1120 aa14.8□□□□□ -0.04
YDR541CYDR541C RPG1P38249 964 aaKnown RBP14.65□□□□□ -0.06
YDR541CYDR541C DIP2Q12220 943 aaPredicted RBP14.57□□□□□ -0.08
YDR541CYDR541C YCK3P39962 524 aa14.27□□□□□ -0.13
YDR541CYDR541C TSR3Q12094 313 aaKnown RBP14.25□□□□□ -0.13
YDR541CYDR541C HAA1Q12753 694 aaKnown RBP14.21□□□□□ -0.13
YDR541CYDR541C RSE1Q04693 1361 aaKnown RBP14.1□□□□□ -0.15
YDR541CYDR541C AVT3P36062 692 aa13.99□□□□□ -0.17
YDR541CYDR541C BFR2Q06631 534 aaKnown RBP13.77□□□□□ -0.21
YDR541CYDR541C MRPL32P25348 183 aa13.7□□□□□ -0.22
YDR541CYDR541C RPL17AP05740 184 aaKnown RBP13.67□□□□□ -0.22
YDR541CYDR541C RPL17BP46990 184 aaKnown RBP13.67□□□□□ -0.22
YDR541CYDR541C REB1P21538 810 aa13.63□□□□□ -0.23
YDR541CYDR541C YGL015CP33199 130 aa13.15□□□□□ -0.3
YDR541CYDR541C SPT21P35209 758 aa13.02□□□□□ -0.33
YDR541CYDR541C CDC27P38042 758 aa12.97□□□□□ -0.33
YDR541CYDR541C YKR023WP36119 530 aaKnown RBP12.92□□□□□ -0.34
YDR541CYDR541C HOP09932 586 aa12.69□□□□□ -0.38
YDR541CYDR541C TFC8Q12308 588 aa12.66□□□□□ -0.38
YDR541CYDR541C DCD1P06773 312 aa12.63□□□□□ -0.39
YDR541CYDR541C UBP10P53874 792 aaPredicted RBP12.6□□□□□ -0.39
YDR541CYDR541C MAP2P38174 421 aaKnown RBP12.59□□□□□ -0.39
YDR541CYDR541C RIM101P33400 625 aa12.58□□□□□ -0.4
YDR541CYDR541C SCY1P53009 804 aa12.34□□□□□ -0.43
YDR541CYDR541C TFA1P36100 482 aa12.27□□□□□ -0.45
YDR541CYDR541C BCH2P36122 765 aa12.25□□□□□ -0.45
YDR541CYDR541C SLX5P32828 619 aaKnown RBP12.18□□□□□ -0.46
YDR541CYDR541C OXP1P28273 1286 aa12.15□□□□□ -0.46
YDR541CYDR541C TIF4632P39936 914 aaKnown RBP12.12□□□□□ -0.47
YDR541CYDR541C BUD31P25337 157 aaPredicted RBP12.04□□□□□ -0.48
YDR541CYDR541C TGL3P40308 642 aa12.04□□□□□ -0.48
YDR541CYDR541C YIL055CP40523 627 aaKnown RBP12.03□□□□□ -0.48
YDR541CYDR541C PTP3P40048 928 aa12.01□□□□□ -0.49
YDR541CYDR541C EPS1P40557 701 aa11.94□□□□□ -0.5
YDR541CYDR541C BDF1P35817 686 aa11.9□□□□□ -0.5
YDR541CYDR541C YAH1Q12184 172 aaKnown RBP11.84□□□□□ -0.51
YDR541CYDR541C RSM7P47150 247 aa11.82□□□□□ -0.52
YDR541CYDR541C BBC1P47068 1157 aa11.74□□□□□ -0.53
YDR541CYDR541C UBP9P39967 754 aa11.72□□□□□ -0.53
YDR541CYDR541C AI2P03876 854 aa11.71□□□□□ -0.53
YDR541CYDR541C YLR271WQ06152 274 aa11.6□□□□□ -0.55
YDR541CYDR541C SIS1P25294 352 aaKnown RBP11.52□□□□□ -0.57
YDR541CYDR541C YOR238WQ08634 303 aa11.51□□□□□ -0.57
YDR541CYDR541C MST1P07236 462 aa11.5□□□□□ -0.57
YDR541CYDR541C NSR1P27476 414 aaKnown RBP RIP-Chip data11.45□□□□□ -0.58not detected
YDR541CYDR541C SSP1P38871 571 aa11.45□□□□□ -0.58
YDR541CYDR541C YAP5P40574 245 aa11.42□□□□□ -0.58
YDR541CYDR541C PSD2P53037 1138 aaKnown RBP11.41□□□□□ -0.58
YDR541CYDR541C ARP8Q12386 881 aaKnown RBP RIP-Chip data11.39□□□□□ -0.59not detected
YDR541CYDR541C YBL029C-AQ3E756 94 aa11.37□□□□□ -0.59
YDR541CYDR541C MRM1P25270 412 aa11.31□□□□□ -0.6
YDR541CYDR541C VNX1P42839 908 aa11.24□□□□□ -0.61
YDR541CYDR541C WSC3Q12215 556 aa11.23□□□□□ -0.61
YDR541CYDR541C GTT3P39996 337 aa11.19□□□□□ -0.62
YDR541CYDR541C CST9Q06032 482 aa11.19□□□□□ -0.62
YDR541CYDR541C MGA2P40578 1113 aa11.17□□□□□ -0.62
YDR541CYDR541C PIB1Q06651 286 aa11.17□□□□□ -0.62
YDR541CYDR541C SPP1Q03012 353 aa11.16□□□□□ -0.62
YDR541CYDR541C RQC2Q12532 1038 aaKnown RBP11.06□□□□□ -0.64
YDR541CYDR541C RTG3P38165 486 aa11.05□□□□□ -0.64
YDR541CYDR541C TIF11P38912 153 aaKnown RBP11.05□□□□□ -0.64
YDR541CYDR541C VPS29P38759 282 aa11.03□□□□□ -0.64
YDR541CYDR541C YMR1P47147 688 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
YDR541CYDR541C DBP1P24784 617 aaKnown RBP10.99□□□□□ -0.65
YDR541CYDR541C YFR006WP43590 535 aa10.97□□□□□ -0.65
YDR541CYDR541C RCR1P38212 213 aa10.93□□□□□ -0.66
YDR541CYDR541C ULI1P43604 169 aa10.93□□□□□ -0.66
YDR541CYDR541C STS1P38637 319 aa10.9□□□□□ -0.66
YDR541CYDR541C MSB4Q12317 492 aa10.89□□□□□ -0.67
YDR541CYDR541C LDB19Q12502 818 aa10.88□□□□□ -0.67
YDR541CYDR541C FKH1P40466 484 aa10.86□□□□□ -0.67
YDR541CYDR541C SET4P42948 560 aa10.86□□□□□ -0.67
YDR541CYDR541C YOL036WQ08206 761 aa10.86□□□□□ -0.67
YDR541CYDR541C IOC2Q12072 812 aa10.86□□□□□ -0.67
YDR541CYDR541C AIR2Q12476 344 aaKnown RBP10.86□□□□□ -0.67
YDR541CYDR541C VMA1P17255 1071 aaKnown RBP10.84□□□□□ -0.67
YDR541CYDR541C EAP1P36041 632 aaKnown RBP10.83□□□□□ -0.68
YDR541CYDR541C YJL171CP46992 396 aa10.82□□□□□ -0.68
YDR541CYDR541C SAM3Q08986 587 aa10.76□□□□□ -0.69
YDR541CYDR541C TRP5P00931 707 aaKnown RBP10.75□□□□□ -0.69
YDR541CYDR541C RTG1P32607 177 aa10.69□□□□□ -0.7
YDR541CYDR541C BMT6Q12291 365 aa10.66□□□□□ -0.7
YDR541CYDR541C GYP5Q12344 894 aa10.65□□□□□ -0.7
YDR541CYDR541C YNL035CP53962 389 aaKnown RBP10.64□□□□□ -0.71
YDR541CYDR541C NCR1Q12200 1170 aa10.64□□□□□ -0.71
YDR541CYDR541C ABP1P15891 592 aaKnown RBP10.59□□□□□ -0.71
YDR541CYDR541C RAM2P29703 316 aa10.59□□□□□ -0.71
YDR541CYDR541C SEC61P32915 480 aa10.59□□□□□ -0.71
YDR541CYDR541C DCW1P36091 449 aa10.57□□□□□ -0.72
YDR541CYDR541C HTA1P04911 132 aaKnown RBP10.56□□□□□ -0.72
YDR541CYDR541C HTA2P04912 132 aa10.56□□□□□ -0.72
YDR541CYDR541C MAK11P20484 414 aaKnown RBP10.55□□□□□ -0.72
YDR541CYDR541C MIF2P35201 549 aa10.54□□□□□ -0.72
YDR541CYDR541C TFG1P41895 735 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms