RNA–Protein interactions for RNA: ENST00000642134.1

CASC19-283, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 870 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-283ENST00000642134 AEBP2Q6ZN18 517 aaPredicted RBP27.61■■■□□ 2.01
CASC19-283ENST00000642134 CHIC1Q5VXU3 224 aa25.92■■□□□ 1.74
CASC19-283ENST00000642134 SENP3Q9H4L4 574 aaPredicted RBP23.76■■□□□ 1.39
CASC19-283ENST00000642134 PHF23Q9BUL5 403 aaPredicted RBP23.31■■□□□ 1.32
CASC19-283ENST00000642134 FOXD1Q16676 465 aa22.13■■□□□ 1.13
CASC19-283ENST00000642134 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
CASC19-283ENST00000642134 MSH5O43196 834 aa21.02■□□□□ 0.96
CASC19-283ENST00000642134 PIAS4Q8N2W9 510 aaPredicted RBP20.56■□□□□ 0.88
CASC19-283ENST00000642134 PLPPR3Q6T4P5 718 aa20.38■□□□□ 0.85
CASC19-283ENST00000642134 PPP6R1Q9UPN7 881 aa20.22■□□□□ 0.83
CASC19-283ENST00000642134 ADRA2BP18089 450 aa20.12■□□□□ 0.81
CASC19-283ENST00000642134 DMRT2Q9Y5R5 561 aa18.73■□□□□ 0.59
CASC19-283ENST00000642134 MAPK8IP2Q13387 824 aaPredicted RBP18.62■□□□□ 0.57
CASC19-283ENST00000642134 SCAF1Q9H7N4 1312 aaKnown RBP18.56■□□□□ 0.56
CASC19-283ENST00000642134 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
CASC19-283ENST00000642134 DCAF8L1A6NGE4 600 aa17.91■□□□□ 0.46
CASC19-283ENST00000642134 HOXD11P31277 338 aaPredicted RBP17.85■□□□□ 0.45
CASC19-283ENST00000642134 RNF39Q9H2S5 420 aa17.84■□□□□ 0.45
CASC19-283ENST00000642134 PPP4R3CPQ6ZMV5 832 aa17.83■□□□□ 0.44
CASC19-283ENST00000642134 C1QBPQ07021 282 aaKnown RBP17.59■□□□□ 0.41
CASC19-283ENST00000642134 CNKSR2Q8WXI2 1034 aa17.58■□□□□ 0.4
CASC19-283ENST00000642134 RNF216Q9NWF9 866 aaPredicted RBP17.57■□□□□ 0.4
CASC19-283ENST00000642134 DNAJC5BQ9UF47 199 aa17.45■□□□□ 0.38
CASC19-283ENST00000642134 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
CASC19-283ENST00000642134 NPM3O75607 178 aaKnown RBP17.02■□□□□ 0.32
CASC19-283ENST00000642134 KCNA4P22459 653 aa17.02■□□□□ 0.32
CASC19-283ENST00000642134 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.96■□□□□ 0.31
CASC19-283ENST00000642134 POTEHQ6S545 545 aa16.64■□□□□ 0.25
CASC19-283ENST00000642134 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
CASC19-283ENST00000642134 DSG3P32926 999 aa16.5■□□□□ 0.23
CASC19-283ENST00000642134 CAPN15O75808 1086 aa16.45■□□□□ 0.22
CASC19-283ENST00000642134 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
CASC19-283ENST00000642134 SLC4A2P04920 1241 aa16.17■□□□□ 0.18
CASC19-283ENST00000642134 APLP2Q06481 763 aa16.15■□□□□ 0.18
CASC19-283ENST00000642134 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
CASC19-283ENST00000642134 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
CASC19-283ENST00000642134 TRHP20396 242 aaPredicted RBP16.03■□□□□ 0.16
CASC19-283ENST00000642134 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.98■□□□□ 0.15
CASC19-283ENST00000642134 HNRNPUL2Q1KMD3 747 aaKnown RBP15.98■□□□□ 0.15
CASC19-283ENST00000642134 ABCB7O75027 752 aa15.97■□□□□ 0.15
CASC19-283ENST00000642134 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
CASC19-283ENST00000642134 SAMD1Q6SPF0 538 aaPredicted RBP15.84■□□□□ 0.13
CASC19-283ENST00000642134 NISCHQ9Y2I1 1504 aa15.77■□□□□ 0.11
CASC19-283ENST00000642134 FOXD4L1Q9NU39 408 aa15.71■□□□□ 0.11
CASC19-283ENST00000642134 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
CASC19-283ENST00000642134 ZBTB22O15209 634 aa15.67■□□□□ 0.1
CASC19-283ENST00000642134 CHRDL2Q6WN34 429 aa15.65■□□□□ 0.1
CASC19-283ENST00000642134 POLA2Q14181 598 aa15.5■□□□□ 0.07
CASC19-283ENST00000642134 ATF5Q9Y2D1 282 aaPredicted RBP15.39■□□□□ 0.05
CASC19-283ENST00000642134 SP7Q8TDD2 431 aaPredicted RBP15.36■□□□□ 0.05
CASC19-283ENST00000642134 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
CASC19-283ENST00000642134 EHMT2Q96KQ7 1210 aa15.27■□□□□ 0.04
CASC19-283ENST00000642134 ZBTB12Q9Y330 459 aaPredicted RBP15.25■□□□□ 0.03
CASC19-283ENST00000642134 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
CASC19-283ENST00000642134 ATXN8OSP0DMR3 200 aa15.14■□□□□ 0.01
CASC19-283ENST00000642134 REM2Q8IYK8 340 aaPredicted RBP15.14■□□□□ 0.01
CASC19-283ENST00000642134 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
CASC19-283ENST00000642134 OSCARQ8IYS5 282 aa15.01□□□□□ -0.01
CASC19-283ENST00000642134 HAX1O00165 279 aa15□□□□□ -0.01
CASC19-283ENST00000642134 FXR2P51116 673 aaKnown RBP eCLIP14.99□□□□□ -0.01
CASC19-283ENST00000642134 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
CASC19-283ENST00000642134 EVX2Q03828 476 aa14.72□□□□□ -0.05
CASC19-283ENST00000642134 SPDYE2BA6NHP3 402 aa14.7□□□□□ -0.06
CASC19-283ENST00000642134 SPDYE6P0CI01 402 aa14.7□□□□□ -0.06
CASC19-283ENST00000642134 SPDYE2Q495Y8 402 aa14.7□□□□□ -0.06
CASC19-283ENST00000642134 FBLN2P98095 1184 aa14.68□□□□□ -0.06
CASC19-283ENST00000642134 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
CASC19-283ENST00000642134 PRKAR2AP13861 404 aaKnown RBP14.58□□□□□ -0.08
CASC19-283ENST00000642134 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
CASC19-283ENST00000642134 C19orf67A6NJJ6 358 aa14.53□□□□□ -0.08
CASC19-283ENST00000642134 CLEC11AQ9Y240 323 aa14.5□□□□□ -0.09
CASC19-283ENST00000642134 GABBR2O75899 941 aa14.42□□□□□ -0.1
CASC19-283ENST00000642134 SSUH2Q9Y2M2 353 aa14.42□□□□□ -0.1
CASC19-283ENST00000642134 LHX8Q68G74 356 aa14.39□□□□□ -0.11
CASC19-283ENST00000642134 ZNF692Q9BU19 519 aaPredicted RBP14.38□□□□□ -0.11
CASC19-283ENST00000642134 CHADLQ6NUI6 762 aa14.25□□□□□ -0.13
CASC19-283ENST00000642134 PRR29P0C7W0 189 aa14.23□□□□□ -0.13
CASC19-283ENST00000642134 PABPN1Q86U42 306 aaKnown RBP eCLIP14.19□□□□□ -0.14
CASC19-283ENST00000642134 CLCN6P51797 869 aa14.17□□□□□ -0.14
CASC19-283ENST00000642134 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
CASC19-283ENST00000642134 CD44P16070 742 aaKnown RBP14.1□□□□□ -0.15
CASC19-283ENST00000642134 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
CASC19-283ENST00000642134 FARP1Q9Y4F1 1045 aaPredicted RBP14.05□□□□□ -0.16
CASC19-283ENST00000642134 DCBLD2Q96PD2 775 aa13.94□□□□□ -0.18
CASC19-283ENST00000642134 ZNF579Q8NAF0 562 aaKnown RBP13.89□□□□□ -0.19
CASC19-283ENST00000642134 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
CASC19-283ENST00000642134 FKBP8Q14318 412 aa13.8□□□□□ -0.2
CASC19-283ENST00000642134 ZRANB1Q9UGI0 708 aa13.8□□□□□ -0.2
CASC19-283ENST00000642134 PROM2Q8N271 834 aa13.79□□□□□ -0.2
CASC19-283ENST00000642134 STAG3Q9UJ98 1225 aa13.79□□□□□ -0.2
CASC19-283ENST00000642134 CREBZFQ9NS37 354 aa13.71□□□□□ -0.21
CASC19-283ENST00000642134 GALR2O43603 387 aaPredicted RBP13.69□□□□□ -0.22
CASC19-283ENST00000642134 OTUD5Q96G74 571 aa13.68□□□□□ -0.22
CASC19-283ENST00000642134 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
CASC19-283ENST00000642134 CCDC180Q9P1Z9 1646 aa13.61□□□□□ -0.23
CASC19-283ENST00000642134 POTEB2H3BUK9 544 aa13.59□□□□□ -0.23
CASC19-283ENST00000642134 POTEMA6NI47 508 aa13.57□□□□□ -0.24
CASC19-283ENST00000642134 NPM1P06748 294 aaKnown RBP eCLIP13.52□□□□□ -0.25
CASC19-283ENST00000642134 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
CASC19-283ENST00000642134 POTEGQ6S5H5 508 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms