RNA–Protein interactions for RNA: ENST00000642088.1

CASC19-278, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 2,091 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-278ENST00000642088 AEBP2Q6ZN18 517 aaPredicted RBP17.73■□□□□ 0.43
CASC19-278ENST00000642088 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
CASC19-278ENST00000642088 PHF23Q9BUL5 403 aaPredicted RBP15.06■□□□□ 0
CASC19-278ENST00000642088 SENP3Q9H4L4 574 aaPredicted RBP14.96□□□□□ -0.01
CASC19-278ENST00000642088 FOXD1Q16676 465 aa14.04□□□□□ -0.16
CASC19-278ENST00000642088 PLPPR3Q6T4P5 718 aa13.74□□□□□ -0.21
CASC19-278ENST00000642088 PPP6R1Q9UPN7 881 aa13.25□□□□□ -0.29
CASC19-278ENST00000642088 ADRA2BP18089 450 aa13.2□□□□□ -0.3
CASC19-278ENST00000642088 PIAS4Q8N2W9 510 aaPredicted RBP13.07□□□□□ -0.32
CASC19-278ENST00000642088 MSH5O43196 834 aa13□□□□□ -0.33
CASC19-278ENST00000642088 POTEDQ86YR6 584 aa12.68□□□□□ -0.38
CASC19-278ENST00000642088 KCNA4P22459 653 aa12.32□□□□□ -0.44
CASC19-278ENST00000642088 PPP4R3CPQ6ZMV5 832 aa12.22□□□□□ -0.45
CASC19-278ENST00000642088 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
CASC19-278ENST00000642088 DMRT2Q9Y5R5 561 aa11.92□□□□□ -0.5
CASC19-278ENST00000642088 SCAF1Q9H7N4 1312 aaKnown RBP11.91□□□□□ -0.5
CASC19-278ENST00000642088 NPM3O75607 178 aaKnown RBP11.85□□□□□ -0.51
CASC19-278ENST00000642088 NCBP3Q53F19 620 aaKnown RBP11.78□□□□□ -0.52
CASC19-278ENST00000642088 CNKSR2Q8WXI2 1034 aa11.75□□□□□ -0.53
CASC19-278ENST00000642088 EHMT2Q96KQ7 1210 aa11.72□□□□□ -0.53
CASC19-278ENST00000642088 SLC4A1APQ9BWU0 796 aaKnown RBP11.64□□□□□ -0.55
CASC19-278ENST00000642088 RNF216Q9NWF9 866 aaPredicted RBP11.53□□□□□ -0.56
CASC19-278ENST00000642088 HOXD11P31277 338 aaPredicted RBP11.51□□□□□ -0.57
CASC19-278ENST00000642088 CSRNP3Q8WYN3 585 aa11.47□□□□□ -0.57
CASC19-278ENST00000642088 ZBTB22O15209 634 aa11.44□□□□□ -0.58
CASC19-278ENST00000642088 DCAF8L1A6NGE4 600 aa11.38□□□□□ -0.59
CASC19-278ENST00000642088 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
CASC19-278ENST00000642088 SLC4A2P04920 1241 aa11.2□□□□□ -0.62
CASC19-278ENST00000642088 RNF39Q9H2S5 420 aa11.17□□□□□ -0.62
CASC19-278ENST00000642088 CACNB1Q02641 598 aaPredicted RBP11.13□□□□□ -0.63
CASC19-278ENST00000642088 FOXD4L1Q9NU39 408 aa11.11□□□□□ -0.63
CASC19-278ENST00000642088 C1QBPQ07021 282 aaKnown RBP10.95□□□□□ -0.66
CASC19-278ENST00000642088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
CASC19-278ENST00000642088 MYCNP04198 464 aaPredicted RBP10.8□□□□□ -0.68
CASC19-278ENST00000642088 U3KPZ7 1027 aaPredicted RBP10.8□□□□□ -0.68
CASC19-278ENST00000642088 ATF5Q9Y2D1 282 aaPredicted RBP10.77□□□□□ -0.69
CASC19-278ENST00000642088 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
CASC19-278ENST00000642088 ATXN8OSP0DMR3 200 aa10.59□□□□□ -0.71
CASC19-278ENST00000642088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.55□□□□□ -0.72
CASC19-278ENST00000642088 HNRNPUL2Q1KMD3 747 aaKnown RBP10.55□□□□□ -0.72
CASC19-278ENST00000642088 SAMD1Q6SPF0 538 aaPredicted RBP10.54□□□□□ -0.72
CASC19-278ENST00000642088 CAPN15O75808 1086 aa10.5□□□□□ -0.73
CASC19-278ENST00000642088 DSG3P32926 999 aa10.49□□□□□ -0.73
CASC19-278ENST00000642088 APLP2Q06481 763 aa10.38□□□□□ -0.75
CASC19-278ENST00000642088 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
CASC19-278ENST00000642088 TRHP20396 242 aaPredicted RBP10.37□□□□□ -0.75
CASC19-278ENST00000642088 ABCB7O75027 752 aa10.32□□□□□ -0.76
CASC19-278ENST00000642088 FKBP8Q14318 412 aa10.29□□□□□ -0.76
CASC19-278ENST00000642088 MKRN4PQ13434 485 aaPredicted RBP10.26□□□□□ -0.77
CASC19-278ENST00000642088 POLA2Q14181 598 aa10.24□□□□□ -0.77
CASC19-278ENST00000642088 SPDYE4A6NLX3 237 aa10□□□□□ -0.81
CASC19-278ENST00000642088 FBLN2P98095 1184 aa9.97□□□□□ -0.81
CASC19-278ENST00000642088 ZBTB12Q9Y330 459 aaPredicted RBP9.95□□□□□ -0.82
CASC19-278ENST00000642088 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
CASC19-278ENST00000642088 POTEHQ6S545 545 aa9.92□□□□□ -0.82
CASC19-278ENST00000642088 PROM2Q8N271 834 aa9.89□□□□□ -0.83
CASC19-278ENST00000642088 RBM42Q9BTD8 480 aaKnown RBP9.89□□□□□ -0.83
CASC19-278ENST00000642088 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
CASC19-278ENST00000642088 ZNF692Q9BU19 519 aaPredicted RBP9.77□□□□□ -0.85
CASC19-278ENST00000642088 SPDYE2BA6NHP3 402 aa9.75□□□□□ -0.85
CASC19-278ENST00000642088 SPDYE6P0CI01 402 aa9.75□□□□□ -0.85
CASC19-278ENST00000642088 SPDYE2Q495Y8 402 aa9.75□□□□□ -0.85
CASC19-278ENST00000642088 SSUH2Q9Y2M2 353 aa9.74□□□□□ -0.85
CASC19-278ENST00000642088 CHRDL2Q6WN34 429 aa9.73□□□□□ -0.85
CASC19-278ENST00000642088 AKT1S1Q96B36 256 aa9.72□□□□□ -0.85
CASC19-278ENST00000642088 PABPN1Q86U42 306 aaKnown RBP eCLIP9.7□□□□□ -0.86
CASC19-278ENST00000642088 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
CASC19-278ENST00000642088 VASPP50552 380 aaPredicted RBP9.67□□□□□ -0.86
CASC19-278ENST00000642088 IFNLR1Q8IU57 520 aaPredicted RBP9.65□□□□□ -0.86
CASC19-278ENST00000642088 FBXO3Q9UK99 471 aa9.64□□□□□ -0.87
CASC19-278ENST00000642088 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
CASC19-278ENST00000642088 PITPNM1O00562 1244 aa9.59□□□□□ -0.87
CASC19-278ENST00000642088 PIP4P2Q8N4L2 257 aa9.54□□□□□ -0.88
CASC19-278ENST00000642088 FXR2P51116 673 aaKnown RBP eCLIP9.49□□□□□ -0.89
CASC19-278ENST00000642088 MIER1Q8N108 512 aa9.43□□□□□ -0.9
CASC19-278ENST00000642088 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
CASC19-278ENST00000642088 PKD2Q13563 968 aa9.43□□□□□ -0.9
CASC19-278ENST00000642088 PLCD3Q8N3E9 789 aa9.42□□□□□ -0.9
CASC19-278ENST00000642088 STAG3Q9UJ98 1225 aa9.42□□□□□ -0.9
CASC19-278ENST00000642088 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
CASC19-278ENST00000642088 KLHL34Q8N239 644 aa9.4□□□□□ -0.91
CASC19-278ENST00000642088 SPOCK2Q92563 424 aa9.33□□□□□ -0.92
CASC19-278ENST00000642088 CREBZFQ9NS37 354 aa9.33□□□□□ -0.92
CASC19-278ENST00000642088 EVX2Q03828 476 aa9.32□□□□□ -0.92
CASC19-278ENST00000642088 PRKAR2AP13861 404 aaKnown RBP9.32□□□□□ -0.92
CASC19-278ENST00000642088 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
CASC19-278ENST00000642088 MNX1P50219 401 aaPredicted RBP9.31□□□□□ -0.92
CASC19-278ENST00000642088 PRR29P0C7W0 189 aa9.3□□□□□ -0.92
CASC19-278ENST00000642088 HAX1O00165 279 aa9.3□□□□□ -0.92
CASC19-278ENST00000642088 CHADLQ6NUI6 762 aa9.27□□□□□ -0.93
CASC19-278ENST00000642088 NISCHQ9Y2I1 1504 aa9.26□□□□□ -0.93
CASC19-278ENST00000642088 NUBP1P53384 320 aa9.24□□□□□ -0.93
CASC19-278ENST00000642088 RGL2O15211 777 aa9.23□□□□□ -0.93
CASC19-278ENST00000642088 CIZ1Q9ULV3 898 aaPredicted RBP9.21□□□□□ -0.93
CASC19-278ENST00000642088 ECM2O94769 699 aaPredicted RBP9.2□□□□□ -0.94
CASC19-278ENST00000642088 DCAF8L2P0C7V8 631 aa9.19□□□□□ -0.94
CASC19-278ENST00000642088 RASEFQ8IZ41 740 aa9.19□□□□□ -0.94
CASC19-278ENST00000642088 C19orf67A6NJJ6 358 aa9.17□□□□□ -0.94
CASC19-278ENST00000642088 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
CASC19-278ENST00000642088 RNF25Q96BH1 459 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms