RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
CASC19-261ENST00000641853 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
CASC19-261ENST00000641853 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
CASC19-261ENST00000641853 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
CASC19-261ENST00000641853 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
CASC19-261ENST00000641853 FOXD1Q16676 465 aa22.39■■□□□ 1.17
CASC19-261ENST00000641853 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
CASC19-261ENST00000641853 ADRA2BP18089 450 aa21.57■■□□□ 1.04
CASC19-261ENST00000641853 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
CASC19-261ENST00000641853 MSH5O43196 834 aa20.52■□□□□ 0.88
CASC19-261ENST00000641853 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
CASC19-261ENST00000641853 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
CASC19-261ENST00000641853 MAPK8IP2Q13387 824 aaPredicted RBP19.58■□□□□ 0.73
CASC19-261ENST00000641853 KCNA4P22459 653 aa19.51■□□□□ 0.71
CASC19-261ENST00000641853 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
CASC19-261ENST00000641853 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
CASC19-261ENST00000641853 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
CASC19-261ENST00000641853 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CASC19-261ENST00000641853 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.62
CASC19-261ENST00000641853 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
CASC19-261ENST00000641853 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
CASC19-261ENST00000641853 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.56
CASC19-261ENST00000641853 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
CASC19-261ENST00000641853 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
CASC19-261ENST00000641853 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
CASC19-261ENST00000641853 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
CASC19-261ENST00000641853 ZBTB22O15209 634 aa18.01■□□□□ 0.47
CASC19-261ENST00000641853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
CASC19-261ENST00000641853 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
CASC19-261ENST00000641853 FOXD4L1Q9NU39 408 aa17.87■□□□□ 0.45
CASC19-261ENST00000641853 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
CASC19-261ENST00000641853 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
CASC19-261ENST00000641853 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
CASC19-261ENST00000641853 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.38
CASC19-261ENST00000641853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
CASC19-261ENST00000641853 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CASC19-261ENST00000641853 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.37
CASC19-261ENST00000641853 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
CASC19-261ENST00000641853 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
CASC19-261ENST00000641853 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
CASC19-261ENST00000641853 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
CASC19-261ENST00000641853 APLP2Q06481 763 aa17.12■□□□□ 0.33
CASC19-261ENST00000641853 CAPN15O75808 1086 aa17.07■□□□□ 0.32
CASC19-261ENST00000641853 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
CASC19-261ENST00000641853 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.3
CASC19-261ENST00000641853 DSG3P32926 999 aa16.81■□□□□ 0.28
CASC19-261ENST00000641853 ABCB7O75027 752 aa16.8■□□□□ 0.28
CASC19-261ENST00000641853 POLA2Q14181 598 aa16.76■□□□□ 0.27
CASC19-261ENST00000641853 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CASC19-261ENST00000641853 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
CASC19-261ENST00000641853 FBLN2P98095 1184 aa16.36■□□□□ 0.21
CASC19-261ENST00000641853 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
CASC19-261ENST00000641853 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CASC19-261ENST00000641853 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
CASC19-261ENST00000641853 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CASC19-261ENST00000641853 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
CASC19-261ENST00000641853 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
CASC19-261ENST00000641853 PROM2Q8N271 834 aa15.83■□□□□ 0.13
CASC19-261ENST00000641853 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CASC19-261ENST00000641853 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
CASC19-261ENST00000641853 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
CASC19-261ENST00000641853 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
CASC19-261ENST00000641853 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
CASC19-261ENST00000641853 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
CASC19-261ENST00000641853 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
CASC19-261ENST00000641853 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
CASC19-261ENST00000641853 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CASC19-261ENST00000641853 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
CASC19-261ENST00000641853 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
CASC19-261ENST00000641853 MIER1Q8N108 512 aa15.2■□□□□ 0.02
CASC19-261ENST00000641853 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
CASC19-261ENST00000641853 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
CASC19-261ENST00000641853 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
CASC19-261ENST00000641853 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
CASC19-261ENST00000641853 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
CASC19-261ENST00000641853 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
CASC19-261ENST00000641853 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
CASC19-261ENST00000641853 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
CASC19-261ENST00000641853 PLEKHG5O94827 1062 aa15.02□□□□□ -0.01
CASC19-261ENST00000641853 KLHL34Q8N239 644 aa15□□□□□ -0.01
CASC19-261ENST00000641853 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
CASC19-261ENST00000641853 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
CASC19-261ENST00000641853 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
CASC19-261ENST00000641853 NUBP1P53384 320 aa14.86□□□□□ -0.03
CASC19-261ENST00000641853 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
CASC19-261ENST00000641853 POTEHQ6S545 545 aa14.81□□□□□ -0.04
CASC19-261ENST00000641853 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
CASC19-261ENST00000641853 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
CASC19-261ENST00000641853 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
CASC19-261ENST00000641853 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
CASC19-261ENST00000641853 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
CASC19-261ENST00000641853 PKD2Q13563 968 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
CASC19-261ENST00000641853 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
CASC19-261ENST00000641853 HAX1O00165 279 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms