RNA–Protein interactions for RNA: ENST00000641853.1

CASC19-261, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,638 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-261ENST00000641853 AEBP2Q6ZN18 517 aaPredicted RBP28.48■■■□□ 2.15
CASC19-261ENST00000641853 CHIC1Q5VXU3 224 aa27.77■■■□□ 2.04
CASC19-261ENST00000641853 PHF23Q9BUL5 403 aaPredicted RBP24.5■■□□□ 1.51
CASC19-261ENST00000641853 SENP3Q9H4L4 574 aaPredicted RBP24.03■■□□□ 1.44
CASC19-261ENST00000641853 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
CASC19-261ENST00000641853 FOXD1Q16676 465 aa22.39■■□□□ 1.17
CASC19-261ENST00000641853 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
CASC19-261ENST00000641853 ADRA2BP18089 450 aa21.57■■□□□ 1.04
CASC19-261ENST00000641853 PIAS4Q8N2W9 510 aaPredicted RBP21.07■□□□□ 0.96
CASC19-261ENST00000641853 MSH5O43196 834 aa20.52■□□□□ 0.88
CASC19-261ENST00000641853 PPP4R3CPQ6ZMV5 832 aa19.88■□□□□ 0.77
CASC19-261ENST00000641853 SCAF1Q9H7N4 1312 aaKnown RBP19.58■□□□□ 0.73
CASC19-261ENST00000641853 MAPK8IP2Q13387 824 aaPredicted RBP19.58■□□□□ 0.73
CASC19-261ENST00000641853 KCNA4P22459 653 aa19.51■□□□□ 0.71
CASC19-261ENST00000641853 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
CASC19-261ENST00000641853 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
CASC19-261ENST00000641853 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
CASC19-261ENST00000641853 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
CASC19-261ENST00000641853 RNF216Q9NWF9 866 aaPredicted RBP18.89■□□□□ 0.62
CASC19-261ENST00000641853 HOXD11P31277 338 aaPredicted RBP18.85■□□□□ 0.61
CASC19-261ENST00000641853 POTEDQ86YR6 584 aa18.71■□□□□ 0.59
CASC19-261ENST00000641853 SLC4A1APQ9BWU0 796 aaKnown RBP18.52■□□□□ 0.56
CASC19-261ENST00000641853 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
CASC19-261ENST00000641853 DCAF8L1A6NGE4 600 aa18.36■□□□□ 0.53
CASC19-261ENST00000641853 SLC4A2P04920 1241 aa18.08■□□□□ 0.48
CASC19-261ENST00000641853 EHMT2Q96KQ7 1210 aa18.07■□□□□ 0.48
CASC19-261ENST00000641853 ZBTB22O15209 634 aa18.01■□□□□ 0.47
CASC19-261ENST00000641853 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.92■□□□□ 0.46
CASC19-261ENST00000641853 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
CASC19-261ENST00000641853 FOXD4L1Q9NU39 408 aa17.87■□□□□ 0.45
CASC19-261ENST00000641853 U3KPZ7 1027 aaPredicted RBP17.7■□□□□ 0.42
CASC19-261ENST00000641853 RNF39Q9H2S5 420 aa17.66■□□□□ 0.42
CASC19-261ENST00000641853 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
CASC19-261ENST00000641853 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.38
CASC19-261ENST00000641853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.36■□□□□ 0.37
CASC19-261ENST00000641853 HNRNPUL2Q1KMD3 747 aaKnown RBP17.36■□□□□ 0.37
CASC19-261ENST00000641853 SAMD1Q6SPF0 538 aaPredicted RBP17.33■□□□□ 0.37
CASC19-261ENST00000641853 ATF5Q9Y2D1 282 aaPredicted RBP17.25■□□□□ 0.35
CASC19-261ENST00000641853 ATXN8OSP0DMR3 200 aa17.22■□□□□ 0.35
CASC19-261ENST00000641853 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
CASC19-261ENST00000641853 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
CASC19-261ENST00000641853 APLP2Q06481 763 aa17.12■□□□□ 0.33
CASC19-261ENST00000641853 CAPN15O75808 1086 aa17.07■□□□□ 0.32
CASC19-261ENST00000641853 TRHP20396 242 aaPredicted RBP17.01■□□□□ 0.31
CASC19-261ENST00000641853 ZNF219Q9P2Y4 722 aaPredicted RBP16.96■□□□□ 0.3
CASC19-261ENST00000641853 DSG3P32926 999 aa16.81■□□□□ 0.28
CASC19-261ENST00000641853 ABCB7O75027 752 aa16.8■□□□□ 0.28
CASC19-261ENST00000641853 POLA2Q14181 598 aa16.76■□□□□ 0.27
CASC19-261ENST00000641853 MKRN4PQ13434 485 aaPredicted RBP16.48■□□□□ 0.23
CASC19-261ENST00000641853 ZBTB12Q9Y330 459 aaPredicted RBP16.39■□□□□ 0.21
CASC19-261ENST00000641853 FBLN2P98095 1184 aa16.36■□□□□ 0.21
CASC19-261ENST00000641853 OSCARQ8IYS5 282 aa16.2■□□□□ 0.18
CASC19-261ENST00000641853 FKBP8Q14318 412 aa16.12■□□□□ 0.17
CASC19-261ENST00000641853 SPDYE4A6NLX3 237 aa16.05■□□□□ 0.16
CASC19-261ENST00000641853 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
CASC19-261ENST00000641853 ZNF692Q9BU19 519 aaPredicted RBP15.96■□□□□ 0.15
CASC19-261ENST00000641853 SSUH2Q9Y2M2 353 aa15.94■□□□□ 0.14
CASC19-261ENST00000641853 RBM42Q9BTD8 480 aaKnown RBP15.93■□□□□ 0.14
CASC19-261ENST00000641853 PROM2Q8N271 834 aa15.83■□□□□ 0.13
CASC19-261ENST00000641853 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
CASC19-261ENST00000641853 PABPN1Q86U42 306 aaKnown RBP eCLIP15.77■□□□□ 0.12
CASC19-261ENST00000641853 REM2Q8IYK8 340 aaPredicted RBP15.68■□□□□ 0.1
CASC19-261ENST00000641853 PITPNM1O00562 1244 aa15.51■□□□□ 0.07
CASC19-261ENST00000641853 SPDYE1Q8NFV5 336 aaPredicted RBP15.5■□□□□ 0.07
CASC19-261ENST00000641853 CLEC11AQ9Y240 323 aa15.46■□□□□ 0.07
CASC19-261ENST00000641853 FBXO3Q9UK99 471 aa15.45■□□□□ 0.06
CASC19-261ENST00000641853 STAG3Q9UJ98 1225 aa15.43■□□□□ 0.06
CASC19-261ENST00000641853 CHRDL2Q6WN34 429 aa15.32■□□□□ 0.04
CASC19-261ENST00000641853 VASPP50552 380 aaPredicted RBP15.32■□□□□ 0.04
CASC19-261ENST00000641853 PRR29P0C7W0 189 aa15.31■□□□□ 0.04
CASC19-261ENST00000641853 MIER1Q8N108 512 aa15.2■□□□□ 0.02
CASC19-261ENST00000641853 FXR2P51116 673 aaKnown RBP eCLIP15.19■□□□□ 0.02
CASC19-261ENST00000641853 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
CASC19-261ENST00000641853 PLCD3Q8N3E9 789 aa15.17■□□□□ 0.02
CASC19-261ENST00000641853 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
CASC19-261ENST00000641853 IFNLR1Q8IU57 520 aaPredicted RBP15.15■□□□□ 0.02
CASC19-261ENST00000641853 CHADLQ6NUI6 762 aa15.14■□□□□ 0.01
CASC19-261ENST00000641853 PRKAR2AP13861 404 aaKnown RBP15.09■□□□□ 0.01
CASC19-261ENST00000641853 MNX1P50219 401 aaPredicted RBP15.07■□□□□ 0
CASC19-261ENST00000641853 PLEKHG5O94827 1062 aa15.02□□□□□ -0.01
CASC19-261ENST00000641853 KLHL34Q8N239 644 aa15□□□□□ -0.01
CASC19-261ENST00000641853 FARP1Q9Y4F1 1045 aaPredicted RBP14.96□□□□□ -0.01
CASC19-261ENST00000641853 ZBTB47Q9UFB7 747 aaPredicted RBP14.93□□□□□ -0.02
CASC19-261ENST00000641853 SPOCK2Q92563 424 aa14.9□□□□□ -0.02
CASC19-261ENST00000641853 NUBP1P53384 320 aa14.86□□□□□ -0.03
CASC19-261ENST00000641853 NPM1P06748 294 aaKnown RBP eCLIP14.84□□□□□ -0.03
CASC19-261ENST00000641853 POTEHQ6S545 545 aa14.81□□□□□ -0.04
CASC19-261ENST00000641853 RASEFQ8IZ41 740 aa14.8□□□□□ -0.04
CASC19-261ENST00000641853 RTN4Q9NQC3 1192 aaKnown RBP14.75□□□□□ -0.05
CASC19-261ENST00000641853 AMER1Q5JTC6 1135 aaPredicted RBP14.69□□□□□ -0.06
CASC19-261ENST00000641853 C19orf67A6NJJ6 358 aa14.67□□□□□ -0.06
CASC19-261ENST00000641853 TSPYL2Q9H2G4 693 aaPredicted RBP14.67□□□□□ -0.06
CASC19-261ENST00000641853 PKD2Q13563 968 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 DCAF8Q5TAQ9 597 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 CD44P16070 742 aaKnown RBP14.66□□□□□ -0.06
CASC19-261ENST00000641853 FAM212AQ96EL1 285 aa14.66□□□□□ -0.06
CASC19-261ENST00000641853 CIZ1Q9ULV3 898 aaPredicted RBP14.66□□□□□ -0.06
CASC19-261ENST00000641853 HAX1O00165 279 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms