RNA–Protein interactions for RNA: ENST00000641733.1

CASC19-255, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,385 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-255ENST00000641733 AEBP2Q6ZN18 517 aaPredicted RBP24.94■■□□□ 1.58
CASC19-255ENST00000641733 CHIC1Q5VXU3 224 aa24.41■■□□□ 1.5
CASC19-255ENST00000641733 PHF23Q9BUL5 403 aaPredicted RBP21.39■■□□□ 1.02
CASC19-255ENST00000641733 SENP3Q9H4L4 574 aaPredicted RBP21.3■■□□□ 1
CASC19-255ENST00000641733 PLPPR3Q6T4P5 718 aa19.86■□□□□ 0.77
CASC19-255ENST00000641733 FOXD1Q16676 465 aa19.68■□□□□ 0.74
CASC19-255ENST00000641733 ADRA2BP18089 450 aa18.88■□□□□ 0.61
CASC19-255ENST00000641733 PPP6R1Q9UPN7 881 aa18.87■□□□□ 0.61
CASC19-255ENST00000641733 PIAS4Q8N2W9 510 aaPredicted RBP18.61■□□□□ 0.57
CASC19-255ENST00000641733 MSH5O43196 834 aa18.27■□□□□ 0.51
CASC19-255ENST00000641733 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
CASC19-255ENST00000641733 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
CASC19-255ENST00000641733 MAPK8IP2Q13387 824 aaPredicted RBP17.11■□□□□ 0.33
CASC19-255ENST00000641733 NCBP3Q53F19 620 aaKnown RBP17.07■□□□□ 0.32
CASC19-255ENST00000641733 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
CASC19-255ENST00000641733 KCNA4P22459 653 aa16.97■□□□□ 0.31
CASC19-255ENST00000641733 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
CASC19-255ENST00000641733 NPM3O75607 178 aaKnown RBP16.72■□□□□ 0.27
CASC19-255ENST00000641733 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
CASC19-255ENST00000641733 HOXD11P31277 338 aaPredicted RBP16.6■□□□□ 0.25
CASC19-255ENST00000641733 POTEDQ86YR6 584 aa16.6■□□□□ 0.25
CASC19-255ENST00000641733 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
CASC19-255ENST00000641733 DCAF8L1A6NGE4 600 aa16.25■□□□□ 0.19
CASC19-255ENST00000641733 SLC4A1APQ9BWU0 796 aaKnown RBP16.21■□□□□ 0.19
CASC19-255ENST00000641733 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.85■□□□□ 0.13
CASC19-255ENST00000641733 SLC4A2P04920 1241 aa15.76■□□□□ 0.11
CASC19-255ENST00000641733 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
CASC19-255ENST00000641733 EHMT2Q96KQ7 1210 aa15.67■□□□□ 0.1
CASC19-255ENST00000641733 RNF39Q9H2S5 420 aa15.59■□□□□ 0.09
CASC19-255ENST00000641733 ZBTB22O15209 634 aa15.57■□□□□ 0.08
CASC19-255ENST00000641733 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
CASC19-255ENST00000641733 MYCNP04198 464 aaPredicted RBP15.51■□□□□ 0.07
CASC19-255ENST00000641733 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
CASC19-255ENST00000641733 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 C1QBPQ07021 282 aaKnown RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 HNRNPUL2Q1KMD3 747 aaKnown RBP15.46■□□□□ 0.07
CASC19-255ENST00000641733 SAMD1Q6SPF0 538 aaPredicted RBP15.36■□□□□ 0.05
CASC19-255ENST00000641733 APLP2Q06481 763 aa15.33■□□□□ 0.04
CASC19-255ENST00000641733 CACNB1Q02641 598 aaPredicted RBP15.24■□□□□ 0.03
CASC19-255ENST00000641733 ATXN8OSP0DMR3 200 aa15.18■□□□□ 0.02
CASC19-255ENST00000641733 CAPN15O75808 1086 aa15.09■□□□□ 0.01
CASC19-255ENST00000641733 SPINK5Q9NQ38 1064 aaPredicted RBP15.09■□□□□ 0.01
CASC19-255ENST00000641733 ZNF219Q9P2Y4 722 aaPredicted RBP15.06■□□□□ 0
CASC19-255ENST00000641733 TRHP20396 242 aaPredicted RBP14.99□□□□□ -0.01
CASC19-255ENST00000641733 ATF5Q9Y2D1 282 aaPredicted RBP14.98□□□□□ -0.01
CASC19-255ENST00000641733 DSG3P32926 999 aa14.82□□□□□ -0.04
CASC19-255ENST00000641733 ABCB7O75027 752 aa14.75□□□□□ -0.05
CASC19-255ENST00000641733 POLA2Q14181 598 aa14.73□□□□□ -0.05
CASC19-255ENST00000641733 ZBTB12Q9Y330 459 aaPredicted RBP14.6□□□□□ -0.07
CASC19-255ENST00000641733 FBLN2P98095 1184 aa14.5□□□□□ -0.09
CASC19-255ENST00000641733 MKRN4PQ13434 485 aaPredicted RBP14.34□□□□□ -0.11
CASC19-255ENST00000641733 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
CASC19-255ENST00000641733 RBM42Q9BTD8 480 aaKnown RBP14.22□□□□□ -0.13
CASC19-255ENST00000641733 SPDYE2BA6NHP3 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SPDYE6P0CI01 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SPDYE2Q495Y8 402 aa14.16□□□□□ -0.14
CASC19-255ENST00000641733 SLC24A1O60721 1099 aa14.09□□□□□ -0.15
CASC19-255ENST00000641733 SPDYE4A6NLX3 237 aa14.08□□□□□ -0.16
CASC19-255ENST00000641733 ZNF692Q9BU19 519 aaPredicted RBP14.07□□□□□ -0.16
CASC19-255ENST00000641733 FKBP8Q14318 412 aa14.05□□□□□ -0.16
CASC19-255ENST00000641733 SSUH2Q9Y2M2 353 aa14□□□□□ -0.17
CASC19-255ENST00000641733 AKT1S1Q96B36 256 aa13.99□□□□□ -0.17
CASC19-255ENST00000641733 PABPN1Q86U42 306 aaKnown RBP eCLIP13.86□□□□□ -0.19
CASC19-255ENST00000641733 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
CASC19-255ENST00000641733 PROM2Q8N271 834 aa13.82□□□□□ -0.2
CASC19-255ENST00000641733 SPDYE1Q8NFV5 336 aaPredicted RBP13.75□□□□□ -0.21
CASC19-255ENST00000641733 STAG3Q9UJ98 1225 aa13.71□□□□□ -0.21
CASC19-255ENST00000641733 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 AMER1Q5JTC6 1135 aaPredicted RBP13.65□□□□□ -0.22
CASC19-255ENST00000641733 FBXO3Q9UK99 471 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
CASC19-255ENST00000641733 CHRDL2Q6WN34 429 aa13.58□□□□□ -0.24
CASC19-255ENST00000641733 PRR29P0C7W0 189 aa13.55□□□□□ -0.24
CASC19-255ENST00000641733 RTN4Q9NQC3 1192 aaKnown RBP13.51□□□□□ -0.25
CASC19-255ENST00000641733 FXR2P51116 673 aaKnown RBP eCLIP13.41□□□□□ -0.26
CASC19-255ENST00000641733 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CASC19-255ENST00000641733 VASPP50552 380 aaPredicted RBP13.4□□□□□ -0.26
CASC19-255ENST00000641733 PLCD3Q8N3E9 789 aa13.37□□□□□ -0.27
CASC19-255ENST00000641733 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
CASC19-255ENST00000641733 MIER1Q8N108 512 aa13.36□□□□□ -0.27
CASC19-255ENST00000641733 PRKAR2AP13861 404 aaKnown RBP13.32□□□□□ -0.28
CASC19-255ENST00000641733 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
CASC19-255ENST00000641733 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
CASC19-255ENST00000641733 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
CASC19-255ENST00000641733 KLHL34Q8N239 644 aa13.2□□□□□ -0.3
CASC19-255ENST00000641733 FARP1Q9Y4F1 1045 aaPredicted RBP13.2□□□□□ -0.3
CASC19-255ENST00000641733 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
CASC19-255ENST00000641733 POTEHQ6S545 545 aa13.17□□□□□ -0.3
CASC19-255ENST00000641733 IFNLR1Q8IU57 520 aaPredicted RBP13.16□□□□□ -0.3
CASC19-255ENST00000641733 MNX1P50219 401 aaPredicted RBP13.15□□□□□ -0.3
CASC19-255ENST00000641733 SPOCK2Q92563 424 aa13.07□□□□□ -0.32
CASC19-255ENST00000641733 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CASC19-255ENST00000641733 NUBP1P53384 320 aa12.98□□□□□ -0.33
CASC19-255ENST00000641733 HAX1O00165 279 aa12.97□□□□□ -0.33
CASC19-255ENST00000641733 FAM212AQ96EL1 285 aa12.96□□□□□ -0.33
CASC19-255ENST00000641733 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
CASC19-255ENST00000641733 CD44P16070 742 aaKnown RBP12.95□□□□□ -0.34
CASC19-255ENST00000641733 RASEFQ8IZ41 740 aa12.94□□□□□ -0.34
CASC19-255ENST00000641733 GSE1Q14687 1217 aa12.92□□□□□ -0.34
CASC19-255ENST00000641733 DCAF8Q5TAQ9 597 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms