RNA–Protein interactions for RNA: ENST00000641658.1

MFSD8-240, Transcript of major facilitator superfamily domain containing 8, human

Gene MFSD8, Length 1,731 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD8-240	ENST00000641658	AEBP2	Q6ZN18	517 aa	Predicted RBP	19.88	■□□□□ 0.77
MFSD8-240	ENST00000641658	CHIC1	Q5VXU3	224 aa		19.69	■□□□□ 0.74
MFSD8-240	ENST00000641658	PHF23	Q9BUL5	403 aa	Predicted RBP	17.37	■□□□□ 0.37
MFSD8-240	ENST00000641658	SENP3	Q9H4L4	574 aa	Predicted RBP	16.8	■□□□□ 0.28
MFSD8-240	ENST00000641658	PLPPR3	Q6T4P5	718 aa		16.13	■□□□□ 0.17
MFSD8-240	ENST00000641658	FOXD1	Q16676	465 aa		15.62	■□□□□ 0.09
MFSD8-240	ENST00000641658	ADRA2B	P18089	450 aa		15.26	■□□□□ 0.03
MFSD8-240	ENST00000641658	PPP6R1	Q9UPN7	881 aa		15.24	■□□□□ 0.03
MFSD8-240	ENST00000641658	POTED	Q86YR6	584 aa		14.83	□□□□□ -0.03
MFSD8-240	ENST00000641658	PIAS4	Q8N2W9	510 aa	Predicted RBP	14.78	□□□□□ -0.04
MFSD8-240	ENST00000641658	MSH5	O43196	834 aa		14.65	□□□□□ -0.06
MFSD8-240	ENST00000641658	KCNA4	P22459	653 aa		14.29	□□□□□ -0.12
MFSD8-240	ENST00000641658	PPP4R3CP	Q6ZMV5	832 aa		14.27	□□□□□ -0.13
MFSD8-240	ENST00000641658	NCBP3	Q53F19	620 aa	Known RBP	13.96	□□□□□ -0.17
MFSD8-240	ENST00000641658	SCAF1	Q9H7N4	1312 aa	Known RBP	13.93	□□□□□ -0.18
MFSD8-240	ENST00000641658	NISCH	Q9Y2I1	1504 aa		13.78	□□□□□ -0.2
MFSD8-240	ENST00000641658	CNKSR2	Q8WXI2	1034 aa		13.78	□□□□□ -0.2
MFSD8-240	ENST00000641658	NPM3	O75607	178 aa	Known RBP	13.77	□□□□□ -0.21
MFSD8-240	ENST00000641658	MAPK8IP2	Q13387	824 aa	Predicted RBP	13.76	□□□□□ -0.21
MFSD8-240	ENST00000641658	EHMT2	Q96KQ7	1210 aa		13.66	□□□□□ -0.22
MFSD8-240	ENST00000641658	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.65	□□□□□ -0.22
MFSD8-240	ENST00000641658	DMRT2	Q9Y5R5	561 aa		13.45	□□□□□ -0.26
MFSD8-240	ENST00000641658	RNF216	Q9NWF9	866 aa	Predicted RBP	13.43	□□□□□ -0.26
MFSD8-240	ENST00000641658	CSRNP3	Q8WYN3	585 aa		13.32	□□□□□ -0.28
MFSD8-240	ENST00000641658	HOXD11	P31277	338 aa	Predicted RBP	13.29	□□□□□ -0.28
MFSD8-240	ENST00000641658	DNAJC5B	Q9UF47	199 aa		13.24	□□□□□ -0.29
MFSD8-240	ENST00000641658	ZBTB22	O15209	634 aa		13.15	□□□□□ -0.3
MFSD8-240	ENST00000641658	FOXD4L1	Q9NU39	408 aa		13.04	□□□□□ -0.32
MFSD8-240	ENST00000641658	DCAF8L1	A6NGE4	600 aa		12.93	□□□□□ -0.34
MFSD8-240	ENST00000641658	SLC4A2	P04920	1241 aa		12.93	□□□□□ -0.34
MFSD8-240	ENST00000641658	CACNB1	Q02641	598 aa	Predicted RBP	12.76	□□□□□ -0.37
MFSD8-240	ENST00000641658	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	12.71	□□□□□ -0.37	3e-8	■□□□□ 9.4
MFSD8-240	ENST00000641658	MYCN	P04198	464 aa	Predicted RBP	12.71	□□□□□ -0.38
MFSD8-240	ENST00000641658	ATXN8OS	P0DMR3	200 aa		12.52	□□□□□ -0.41
MFSD8-240	ENST00000641658	RNF39	Q9H2S5	420 aa		12.52	□□□□□ -0.41
MFSD8-240	ENST00000641658		U3KPZ7	1027 aa	Predicted RBP	12.52	□□□□□ -0.41
MFSD8-240	ENST00000641658	ABCC9	O60706	1549 aa		12.46	□□□□□ -0.42
MFSD8-240	ENST00000641658	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	12.45	□□□□□ -0.42
MFSD8-240	ENST00000641658	HNRNPUL2	Q1KMD3	747 aa	Known RBP	12.45	□□□□□ -0.42
MFSD8-240	ENST00000641658	SAMD1	Q6SPF0	538 aa	Predicted RBP	12.42	□□□□□ -0.42
MFSD8-240	ENST00000641658	CCDC180	Q9P1Z9	1646 aa		12.38	□□□□□ -0.43
MFSD8-240	ENST00000641658	ATF5	Q9Y2D1	282 aa	Predicted RBP	12.37	□□□□□ -0.43
MFSD8-240	ENST00000641658	C1QBP	Q07021	282 aa	Known RBP	12.28	□□□□□ -0.44
MFSD8-240	ENST00000641658	APLP2	Q06481	763 aa		12.23	□□□□□ -0.45
MFSD8-240	ENST00000641658	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.14	□□□□□ -0.47
MFSD8-240	ENST00000641658	SPINK5	Q9NQ38	1064 aa	Predicted RBP	12.11	□□□□□ -0.47
MFSD8-240	ENST00000641658	TRH	P20396	242 aa	Predicted RBP	12.08	□□□□□ -0.48
MFSD8-240	ENST00000641658	CAPN15	O75808	1086 aa		12.05	□□□□□ -0.48
MFSD8-240	ENST00000641658	FKBP8	Q14318	412 aa		12.04	□□□□□ -0.48
MFSD8-240	ENST00000641658	POLA2	Q14181	598 aa		11.93	□□□□□ -0.5
MFSD8-240	ENST00000641658	ABCB7	O75027	752 aa		11.86	□□□□□ -0.51
MFSD8-240	ENST00000641658	MKRN4P	Q13434	485 aa	Predicted RBP	11.84	□□□□□ -0.51
MFSD8-240	ENST00000641658	FBLN2	P98095	1184 aa		11.81	□□□□□ -0.52
MFSD8-240	ENST00000641658	RB1CC1	Q8TDY2	1594 aa		11.79	□□□□□ -0.52
MFSD8-240	ENST00000641658	DSG3	P32926	999 aa		11.74	□□□□□ -0.53
MFSD8-240	ENST00000641658	SPDYE4	A6NLX3	237 aa		11.72	□□□□□ -0.53
MFSD8-240	ENST00000641658	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.71	□□□□□ -0.54
MFSD8-240	ENST00000641658	DCAF8L2	P0C7V8	631 aa		11.7	□□□□□ -0.54
MFSD8-240	ENST00000641658	NACAD	O15069	1562 aa		11.68	□□□□□ -0.54
MFSD8-240	ENST00000641658	UNC13A	Q9UPW8	1703 aa		11.66	□□□□□ -0.54
MFSD8-240	ENST00000641658	PABPN1	Q86U42	306 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
MFSD8-240	ENST00000641658	POTEH	Q6S545	545 aa		11.55	□□□□□ -0.56
MFSD8-240	ENST00000641658	PROM2	Q8N271	834 aa		11.52	□□□□□ -0.56
MFSD8-240	ENST00000641658	OSCAR	Q8IYS5	282 aa		11.52	□□□□□ -0.57
MFSD8-240	ENST00000641658	BICRA	Q9NZM4	1560 aa		11.5	□□□□□ -0.57
MFSD8-240	ENST00000641658	FBXO3	Q9UK99	471 aa		11.49	□□□□□ -0.57
MFSD8-240	ENST00000641658	RTN4	Q9NQC3	1192 aa	Known RBP	11.49	□□□□□ -0.57
MFSD8-240	ENST00000641658	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.47	□□□□□ -0.57
MFSD8-240	ENST00000641658	ZNF692	Q9BU19	519 aa	Predicted RBP	11.46	□□□□□ -0.57
MFSD8-240	ENST00000641658	MYO15B	Q96JP2	1530 aa		11.46	□□□□□ -0.58
MFSD8-240	ENST00000641658	SPDYE2B	A6NHP3	402 aa		11.43	□□□□□ -0.58
MFSD8-240	ENST00000641658	SPDYE6	P0CI01	402 aa		11.43	□□□□□ -0.58
MFSD8-240	ENST00000641658	SPDYE2	Q495Y8	402 aa		11.43	□□□□□ -0.58
MFSD8-240	ENST00000641658	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.4	□□□□□ -0.58
MFSD8-240	ENST00000641658	SSUH2	Q9Y2M2	353 aa		11.36	□□□□□ -0.59
MFSD8-240	ENST00000641658	SCRIB	Q14160	1630 aa		11.35	□□□□□ -0.59
MFSD8-240	ENST00000641658	VASP	P50552	380 aa	Predicted RBP	11.35	□□□□□ -0.59
MFSD8-240	ENST00000641658	DCAF1	Q9Y4B6	1507 aa		11.32	□□□□□ -0.6
MFSD8-240	ENST00000641658	CC2D2A	Q9P2K1	1620 aa		11.25	□□□□□ -0.61
MFSD8-240	ENST00000641658	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.23	□□□□□ -0.61
MFSD8-240	ENST00000641658	SHROOM4	Q9ULL8	1493 aa		11.21	□□□□□ -0.62
MFSD8-240	ENST00000641658	STAG3	Q9UJ98	1225 aa		11.2	□□□□□ -0.62
MFSD8-240	ENST00000641658	EIF4G1	Q04637	1599 aa	Known RBP	11.2	□□□□□ -0.62
MFSD8-240	ENST00000641658	CECR2	Q9BXF3	1484 aa		11.19	□□□□□ -0.62
MFSD8-240	ENST00000641658	RBM42	Q9BTD8	480 aa	Known RBP	11.17	□□□□□ -0.62
MFSD8-240	ENST00000641658	PLCD3	Q8N3E9	789 aa		11.13	□□□□□ -0.63
MFSD8-240	ENST00000641658	KLHL34	Q8N239	644 aa		11.12	□□□□□ -0.63
MFSD8-240	ENST00000641658	MIER1	Q8N108	512 aa		11.11	□□□□□ -0.63
MFSD8-240	ENST00000641658	AKT1S1	Q96B36	256 aa		11.09	□□□□□ -0.63
MFSD8-240	ENST00000641658	SPDYE1	Q8NFV5	336 aa	Predicted RBP	11.03	□□□□□ -0.64
MFSD8-240	ENST00000641658	SPOCK2	Q92563	424 aa		11.03	□□□□□ -0.64
MFSD8-240	ENST00000641658	CLEC11A	Q9Y240	323 aa		11.02	□□□□□ -0.65
MFSD8-240	ENST00000641658	REM2	Q8IYK8	340 aa	Predicted RBP	11.01	□□□□□ -0.65
MFSD8-240	ENST00000641658	PLEKHG5	O94827	1062 aa		11.01	□□□□□ -0.65
MFSD8-240	ENST00000641658	CHRDL2	Q6WN34	429 aa		10.96	□□□□□ -0.65
MFSD8-240	ENST00000641658	PKD2	Q13563	968 aa		10.95	□□□□□ -0.66
MFSD8-240	ENST00000641658	PRR29	P0C7W0	189 aa		10.94	□□□□□ -0.66
MFSD8-240	ENST00000641658	ZBTB47	Q9UFB7	747 aa	Predicted RBP	10.94	□□□□□ -0.66
MFSD8-240	ENST00000641658	PITPNM1	O00562	1244 aa		10.88	□□□□□ -0.67
MFSD8-240	ENST00000641658	SLC24A1	O60721	1099 aa		10.86	□□□□□ -0.67

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