RNA–Protein interactions for RNA: ENST00000641578.1

CASC19-240, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,061 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-240ENST00000641578 AEBP2Q6ZN18 517 aaPredicted RBP34.2■■■■□ 3.07
CASC19-240ENST00000641578 CHIC1Q5VXU3 224 aa31.87■■■□□ 2.69
CASC19-240ENST00000641578 SENP3Q9H4L4 574 aaPredicted RBP29.2■■■□□ 2.26
CASC19-240ENST00000641578 PHF23Q9BUL5 403 aaPredicted RBP28.76■■■□□ 2.19
CASC19-240ENST00000641578 FOXD1Q16676 465 aa27.33■■□□□ 1.97
CASC19-240ENST00000641578 POTEDQ86YR6 584 aa26.23■■□□□ 1.79
CASC19-240ENST00000641578 MSH5O43196 834 aa25.76■■□□□ 1.71
CASC19-240ENST00000641578 PIAS4Q8N2W9 510 aaPredicted RBP25.36■■□□□ 1.65
CASC19-240ENST00000641578 PLPPR3Q6T4P5 718 aa25.14■■□□□ 1.62
CASC19-240ENST00000641578 PPP6R1Q9UPN7 881 aa25.12■■□□□ 1.61
CASC19-240ENST00000641578 ADRA2BP18089 450 aa24.97■■□□□ 1.59
CASC19-240ENST00000641578 MAPK8IP2Q13387 824 aaPredicted RBP23.14■■□□□ 1.29
CASC19-240ENST00000641578 DMRT2Q9Y5R5 561 aa23.08■■□□□ 1.29
CASC19-240ENST00000641578 SCAF1Q9H7N4 1312 aaKnown RBP22.79■■□□□ 1.24
CASC19-240ENST00000641578 CACNB1Q02641 598 aaPredicted RBP22.48■■□□□ 1.19
CASC19-240ENST00000641578 DCAF8L1A6NGE4 600 aa22.12■■□□□ 1.13
CASC19-240ENST00000641578 HOXD11P31277 338 aaPredicted RBP22■■□□□ 1.11
CASC19-240ENST00000641578 PPP4R3CPQ6ZMV5 832 aa21.97■■□□□ 1.11
CASC19-240ENST00000641578 RNF39Q9H2S5 420 aa21.97■■□□□ 1.11
CASC19-240ENST00000641578 CNKSR2Q8WXI2 1034 aa21.69■■□□□ 1.06
CASC19-240ENST00000641578 RNF216Q9NWF9 866 aaPredicted RBP21.66■■□□□ 1.06
CASC19-240ENST00000641578 C1QBPQ07021 282 aaKnown RBP21.58■■□□□ 1.05
CASC19-240ENST00000641578 DNAJC5BQ9UF47 199 aa21.35■■□□□ 1.01
CASC19-240ENST00000641578 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.92■□□□□ 0.94
CASC19-240ENST00000641578 NCBP3Q53F19 620 aaKnown RBP20.9■□□□□ 0.94
CASC19-240ENST00000641578 NPM3O75607 178 aaKnown RBP20.65■□□□□ 0.9
CASC19-240ENST00000641578 U3KPZ7 1027 aaPredicted RBP20.45■□□□□ 0.86
CASC19-240ENST00000641578 POTEHQ6S545 545 aa20.42■□□□□ 0.86
CASC19-240ENST00000641578 DSG3P32926 999 aa20.36■□□□□ 0.85
CASC19-240ENST00000641578 SPINK5Q9NQ38 1064 aaPredicted RBP20.35■□□□□ 0.85
CASC19-240ENST00000641578 CAPN15O75808 1086 aa20.3■□□□□ 0.84
CASC19-240ENST00000641578 SLC4A2P04920 1241 aa19.91■□□□□ 0.78
CASC19-240ENST00000641578 TRHP20396 242 aaPredicted RBP19.83■□□□□ 0.77
CASC19-240ENST00000641578 ABCB7O75027 752 aa19.8■□□□□ 0.76
CASC19-240ENST00000641578 ZNF219Q9P2Y4 722 aaPredicted RBP19.76■□□□□ 0.75
CASC19-240ENST00000641578 APLP2Q06481 763 aa19.73■□□□□ 0.75
CASC19-240ENST00000641578 KCNA4P22459 653 aa19.72■□□□□ 0.75
CASC19-240ENST00000641578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.59■□□□□ 0.73
CASC19-240ENST00000641578 HNRNPUL2Q1KMD3 747 aaKnown RBP19.59■□□□□ 0.73
CASC19-240ENST00000641578 SAMD1Q6SPF0 538 aaPredicted RBP19.47■□□□□ 0.71
CASC19-240ENST00000641578 RBM42Q9BTD8 480 aaKnown RBP19.39■□□□□ 0.69
CASC19-240ENST00000641578 CHRDL2Q6WN34 429 aa19.24■□□□□ 0.67
CASC19-240ENST00000641578 POLA2Q14181 598 aa19.18■□□□□ 0.66
CASC19-240ENST00000641578 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.64
CASC19-240ENST00000641578 SP7Q8TDD2 431 aaPredicted RBP18.86■□□□□ 0.61
CASC19-240ENST00000641578 AKT1S1Q96B36 256 aa18.84■□□□□ 0.61
CASC19-240ENST00000641578 ATF5Q9Y2D1 282 aaPredicted RBP18.76■□□□□ 0.59
CASC19-240ENST00000641578 ZBTB12Q9Y330 459 aaPredicted RBP18.69■□□□□ 0.58
CASC19-240ENST00000641578 REM2Q8IYK8 340 aaPredicted RBP18.68■□□□□ 0.58
CASC19-240ENST00000641578 PIP4P2Q8N4L2 257 aa18.67■□□□□ 0.58
CASC19-240ENST00000641578 OSCARQ8IYS5 282 aa18.59■□□□□ 0.57
CASC19-240ENST00000641578 FOXD4L1Q9NU39 408 aa18.56■□□□□ 0.56
CASC19-240ENST00000641578 PITPNM1O00562 1244 aa18.5■□□□□ 0.55
CASC19-240ENST00000641578 HAX1O00165 279 aa18.47■□□□□ 0.55
CASC19-240ENST00000641578 FXR2P51116 673 aaKnown RBP eCLIP18.47■□□□□ 0.55
CASC19-240ENST00000641578 SLC4A1APQ9BWU0 796 aaKnown RBP18.46■□□□□ 0.55
CASC19-240ENST00000641578 EVX2Q03828 476 aa18.26■□□□□ 0.51
CASC19-240ENST00000641578 ZBTB22O15209 634 aa18.16■□□□□ 0.5
CASC19-240ENST00000641578 SPDYE2BA6NHP3 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 SPDYE6P0CI01 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 SPDYE2Q495Y8 402 aa18.09■□□□□ 0.49
CASC19-240ENST00000641578 ATXN8OSP0DMR3 200 aa18.04■□□□□ 0.48
CASC19-240ENST00000641578 PRKAR2AP13861 404 aaKnown RBP18■□□□□ 0.47
CASC19-240ENST00000641578 FBLN2P98095 1184 aa17.97■□□□□ 0.47
CASC19-240ENST00000641578 CLEC11AQ9Y240 323 aa17.92■□□□□ 0.46
CASC19-240ENST00000641578 SPDYE1Q8NFV5 336 aaPredicted RBP17.91■□□□□ 0.46
CASC19-240ENST00000641578 C19orf67A6NJJ6 358 aa17.89■□□□□ 0.45
CASC19-240ENST00000641578 MKRN4PQ13434 485 aaPredicted RBP17.86■□□□□ 0.45
CASC19-240ENST00000641578 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
CASC19-240ENST00000641578 GABBR2O75899 941 aa17.78■□□□□ 0.44
CASC19-240ENST00000641578 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
CASC19-240ENST00000641578 CHADLQ6NUI6 762 aa17.68■□□□□ 0.42
CASC19-240ENST00000641578 LHX8Q68G74 356 aa17.67■□□□□ 0.42
CASC19-240ENST00000641578 NISCHQ9Y2I1 1504 aa17.63■□□□□ 0.41
CASC19-240ENST00000641578 PRR29P0C7W0 189 aa17.54■□□□□ 0.4
CASC19-240ENST00000641578 PABPN1Q86U42 306 aaKnown RBP eCLIP17.51■□□□□ 0.39
CASC19-240ENST00000641578 POTEIP0CG38 1075 aa17.43■□□□□ 0.38
CASC19-240ENST00000641578 CD44P16070 742 aaKnown RBP17.39■□□□□ 0.37
CASC19-240ENST00000641578 FARP1Q9Y4F1 1045 aaPredicted RBP17.34■□□□□ 0.37
CASC19-240ENST00000641578 CLCN6P51797 869 aa17.24■□□□□ 0.35
CASC19-240ENST00000641578 DCBLD2Q96PD2 775 aa17.13■□□□□ 0.33
CASC19-240ENST00000641578 ZNF579Q8NAF0 562 aaKnown RBP17.1■□□□□ 0.33
CASC19-240ENST00000641578 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
CASC19-240ENST00000641578 PLSCR2Q9NRY7 297 aa17.01■□□□□ 0.31
CASC19-240ENST00000641578 CREBZFQ9NS37 354 aa17■□□□□ 0.31
CASC19-240ENST00000641578 GALR2O43603 387 aaPredicted RBP16.95■□□□□ 0.3
CASC19-240ENST00000641578 OTUD5Q96G74 571 aa16.89■□□□□ 0.29
CASC19-240ENST00000641578 POTEB2H3BUK9 544 aa16.86■□□□□ 0.29
CASC19-240ENST00000641578 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
CASC19-240ENST00000641578 PHF12Q96QT6 1004 aa16.78■□□□□ 0.28
CASC19-240ENST00000641578 CSRNP3Q8WYN3 585 aa16.75■□□□□ 0.27
CASC19-240ENST00000641578 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
CASC19-240ENST00000641578 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
CASC19-240ENST00000641578 POTEMA6NI47 508 aa16.67■□□□□ 0.26
CASC19-240ENST00000641578 MNX1P50219 401 aaPredicted RBP16.66■□□□□ 0.26
CASC19-240ENST00000641578 SPDYE4A6NLX3 237 aa16.65■□□□□ 0.26
CASC19-240ENST00000641578 NPM1P06748 294 aaKnown RBP eCLIP16.61■□□□□ 0.25
CASC19-240ENST00000641578 POTEGQ6S5H5 508 aa16.6■□□□□ 0.25
CASC19-240ENST00000641578 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
CASC19-240ENST00000641578 MS4A3Q96HJ5 214 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms