RNA–Protein interactions for RNA: ENST00000641162.1

CASC19-213, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,091 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-213ENST00000641162 AEBP2Q6ZN18 517 aaPredicted RBP23.72■■□□□ 1.39
CASC19-213ENST00000641162 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
CASC19-213ENST00000641162 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
CASC19-213ENST00000641162 PHF23Q9BUL5 403 aaPredicted RBP20.01■□□□□ 0.79
CASC19-213ENST00000641162 FOXD1Q16676 465 aa18.9■□□□□ 0.62
CASC19-213ENST00000641162 PLPPR3Q6T4P5 718 aa17.92■□□□□ 0.46
CASC19-213ENST00000641162 MSH5O43196 834 aa17.84■□□□□ 0.45
CASC19-213ENST00000641162 PIAS4Q8N2W9 510 aaPredicted RBP17.65■□□□□ 0.42
CASC19-213ENST00000641162 POTEDQ86YR6 584 aa17.54■□□□□ 0.4
CASC19-213ENST00000641162 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CASC19-213ENST00000641162 ADRA2BP18089 450 aa17.47■□□□□ 0.39
CASC19-213ENST00000641162 SCAF1Q9H7N4 1312 aaKnown RBP16.12■□□□□ 0.17
CASC19-213ENST00000641162 DMRT2Q9Y5R5 561 aa16.11■□□□□ 0.17
CASC19-213ENST00000641162 MAPK8IP2Q13387 824 aaPredicted RBP16.06■□□□□ 0.16
CASC19-213ENST00000641162 PPP4R3CPQ6ZMV5 832 aa15.64■□□□□ 0.09
CASC19-213ENST00000641162 HOXD11P31277 338 aaPredicted RBP15.47■□□□□ 0.07
CASC19-213ENST00000641162 CNKSR2Q8WXI2 1034 aa15.42■□□□□ 0.06
CASC19-213ENST00000641162 DCAF8L1A6NGE4 600 aa15.35■□□□□ 0.05
CASC19-213ENST00000641162 RNF216Q9NWF9 866 aaPredicted RBP15.33■□□□□ 0.04
CASC19-213ENST00000641162 CACNB1Q02641 598 aaPredicted RBP15.3■□□□□ 0.04
CASC19-213ENST00000641162 RNF39Q9H2S5 420 aa15.17■□□□□ 0.02
CASC19-213ENST00000641162 DNAJC5BQ9UF47 199 aa15.08■□□□□ 0
CASC19-213ENST00000641162 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
CASC19-213ENST00000641162 C1QBPQ07021 282 aaKnown RBP14.98□□□□□ -0.01
CASC19-213ENST00000641162 NPM3O75607 178 aaKnown RBP14.78□□□□□ -0.04
CASC19-213ENST00000641162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
CASC19-213ENST00000641162 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CASC19-213ENST00000641162 KCNA4P22459 653 aa14.35□□□□□ -0.11
CASC19-213ENST00000641162 CAPN15O75808 1086 aa14.16□□□□□ -0.14
CASC19-213ENST00000641162 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
CASC19-213ENST00000641162 DSG3P32926 999 aa14.15□□□□□ -0.14
CASC19-213ENST00000641162 SLC4A2P04920 1241 aa14.14□□□□□ -0.15
CASC19-213ENST00000641162 APLP2Q06481 763 aa14.07□□□□□ -0.16
CASC19-213ENST00000641162 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.02□□□□□ -0.17
CASC19-213ENST00000641162 HNRNPUL2Q1KMD3 747 aaKnown RBP14.02□□□□□ -0.17
CASC19-213ENST00000641162 ZNF219Q9P2Y4 722 aaPredicted RBP13.96□□□□□ -0.17
CASC19-213ENST00000641162 SAMD1Q6SPF0 538 aaPredicted RBP13.9□□□□□ -0.18
CASC19-213ENST00000641162 TRHP20396 242 aaPredicted RBP13.89□□□□□ -0.19
CASC19-213ENST00000641162 ABCB7O75027 752 aa13.77□□□□□ -0.21
CASC19-213ENST00000641162 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
CASC19-213ENST00000641162 POTEHQ6S545 545 aa13.73□□□□□ -0.21
CASC19-213ENST00000641162 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
CASC19-213ENST00000641162 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
CASC19-213ENST00000641162 POLA2Q14181 598 aa13.51□□□□□ -0.25
CASC19-213ENST00000641162 FOXD4L1Q9NU39 408 aa13.49□□□□□ -0.25
CASC19-213ENST00000641162 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
CASC19-213ENST00000641162 ATF5Q9Y2D1 282 aaPredicted RBP13.31□□□□□ -0.28
CASC19-213ENST00000641162 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
CASC19-213ENST00000641162 AKT1S1Q96B36 256 aa13.21□□□□□ -0.29
CASC19-213ENST00000641162 ZBTB22O15209 634 aa13.17□□□□□ -0.3
CASC19-213ENST00000641162 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
CASC19-213ENST00000641162 OSCARQ8IYS5 282 aa13.07□□□□□ -0.32
CASC19-213ENST00000641162 REM2Q8IYK8 340 aaPredicted RBP13.04□□□□□ -0.32
CASC19-213ENST00000641162 SLC24A1O60721 1099 aa12.96□□□□□ -0.33
CASC19-213ENST00000641162 EHMT2Q96KQ7 1210 aa12.92□□□□□ -0.34
CASC19-213ENST00000641162 FBLN2P98095 1184 aa12.9□□□□□ -0.34
CASC19-213ENST00000641162 PIP4P2Q8N4L2 257 aa12.89□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 PITPNM1O00562 1244 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
CASC19-213ENST00000641162 FXR2P51116 673 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC19-213ENST00000641162 SP7Q8TDD2 431 aaPredicted RBP12.83□□□□□ -0.36
CASC19-213ENST00000641162 MKRN4PQ13434 485 aaPredicted RBP12.73□□□□□ -0.37
CASC19-213ENST00000641162 HAX1O00165 279 aa12.68□□□□□ -0.38
CASC19-213ENST00000641162 SPDYE1Q8NFV5 336 aaPredicted RBP12.68□□□□□ -0.38
CASC19-213ENST00000641162 SSUH2Q9Y2M2 353 aa12.67□□□□□ -0.38
CASC19-213ENST00000641162 ZNF692Q9BU19 519 aaPredicted RBP12.65□□□□□ -0.38
CASC19-213ENST00000641162 CLEC11AQ9Y240 323 aa12.57□□□□□ -0.4
CASC19-213ENST00000641162 PRKAR2AP13861 404 aaKnown RBP12.55□□□□□ -0.4
CASC19-213ENST00000641162 CSRNP3Q8WYN3 585 aa12.48□□□□□ -0.41
CASC19-213ENST00000641162 NISCHQ9Y2I1 1504 aa12.47□□□□□ -0.41
CASC19-213ENST00000641162 EVX2Q03828 476 aa12.47□□□□□ -0.41
CASC19-213ENST00000641162 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASC19-213ENST00000641162 C19orf67A6NJJ6 358 aa12.43□□□□□ -0.42
CASC19-213ENST00000641162 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
CASC19-213ENST00000641162 CHADLQ6NUI6 762 aa12.32□□□□□ -0.44
CASC19-213ENST00000641162 GABBR2O75899 941 aa12.24□□□□□ -0.45
CASC19-213ENST00000641162 FARP1Q9Y4F1 1045 aaPredicted RBP12.2□□□□□ -0.46
CASC19-213ENST00000641162 STAG3Q9UJ98 1225 aa12.17□□□□□ -0.46
CASC19-213ENST00000641162 CLCN6P51797 869 aa12.16□□□□□ -0.46
CASC19-213ENST00000641162 CD44P16070 742 aaKnown RBP12.15□□□□□ -0.46
CASC19-213ENST00000641162 SPDYE4A6NLX3 237 aa12.09□□□□□ -0.47
CASC19-213ENST00000641162 AMER1Q5JTC6 1135 aaPredicted RBP12.07□□□□□ -0.48
CASC19-213ENST00000641162 RTN4Q9NQC3 1192 aaKnown RBP12.07□□□□□ -0.48
CASC19-213ENST00000641162 CREBZFQ9NS37 354 aa12.05□□□□□ -0.48
CASC19-213ENST00000641162 ABCC9O60706 1549 aa12.04□□□□□ -0.48
CASC19-213ENST00000641162 LHX8Q68G74 356 aa12.01□□□□□ -0.49
CASC19-213ENST00000641162 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
CASC19-213ENST00000641162 POTEIP0CG38 1075 aa11.95□□□□□ -0.5
CASC19-213ENST00000641162 ZRANB1Q9UGI0 708 aa11.94□□□□□ -0.5
CASC19-213ENST00000641162 DCBLD2Q96PD2 775 aa11.9□□□□□ -0.5
CASC19-213ENST00000641162 PAK3O75914 559 aaPredicted RBP11.88□□□□□ -0.51
CASC19-213ENST00000641162 NPM1P06748 294 aaKnown RBP eCLIP11.88□□□□□ -0.51
CASC19-213ENST00000641162 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
CASC19-213ENST00000641162 PROM2Q8N271 834 aa11.84□□□□□ -0.51
CASC19-213ENST00000641162 GALR2O43603 387 aaPredicted RBP11.79□□□□□ -0.52
CASC19-213ENST00000641162 PHF12Q96QT6 1004 aa11.73□□□□□ -0.53
CASC19-213ENST00000641162 PLEKHG5O94827 1062 aa11.61□□□□□ -0.55
CASC19-213ENST00000641162 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms