RNA–Protein interactions for RNA: ENST00000640600.1

SLC35A3-221, Transcript of solute carrier family 35 member A3, humanhuman

TSL 5 BASIC

Gene SLC35A3, Length 3,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC35A3-221ENST00000640600 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
SLC35A3-221ENST00000640600 SHROOM4Q9ULL8 1493 aa27.72■■■□□ 2.03
SLC35A3-221ENST00000640600 SUPT5HO00267 1087 aaKnown RBP27.35■■□□□ 1.97
SLC35A3-221ENST00000640600 DCAF8L2P0C7V8 631 aa27.22■■□□□ 1.95
SLC35A3-221ENST00000640600 EHMT2Q96KQ7 1210 aa26.02■■□□□ 1.76
SLC35A3-221ENST00000640600 PCGF6Q9BYE7 350 aa26.01■■□□□ 1.75
SLC35A3-221ENST00000640600 CHIC1Q5VXU3 224 aa25.88■■□□□ 1.73
SLC35A3-221ENST00000640600 LOC105371045A0A1W2PR82 267 aa25.81■■□□□ 1.72
SLC35A3-221ENST00000640600 PPARGC1BQ86YN6 1023 aaKnown RBP25.78■■□□□ 1.72
SLC35A3-221ENST00000640600 MYO15BQ96JP2 1530 aa25.72■■□□□ 1.71
SLC35A3-221ENST00000640600 FAM9AQ8IZU1 332 aaPredicted RBP25.57■■□□□ 1.68
SLC35A3-221ENST00000640600 HRCP23327 699 aa25.43■■□□□ 1.66
SLC35A3-221ENST00000640600 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
SLC35A3-221ENST00000640600 CCDC180Q9P1Z9 1646 aa25.11■■□□□ 1.61
SLC35A3-221ENST00000640600 TTBK1Q5TCY1 1321 aaPredicted RBP25.08■■□□□ 1.61
SLC35A3-221ENST00000640600 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
SLC35A3-221ENST00000640600 TRIM26Q12899 539 aaPredicted RBP24.7■■□□□ 1.54
SLC35A3-221ENST00000640600 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
SLC35A3-221ENST00000640600 ABCC9O60706 1549 aa24.49■■□□□ 1.51
SLC35A3-221ENST00000640600 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.41■■□□□ 1.5
SLC35A3-221ENST00000640600 RANGAP1P46060 587 aaPredicted RBP24.35■■□□□ 1.49
SLC35A3-221ENST00000640600 DCAF1Q9Y4B6 1507 aa24.34■■□□□ 1.49
SLC35A3-221ENST00000640600 RSF1Q96T23 1441 aaPredicted RBP24.32■■□□□ 1.48
SLC35A3-221ENST00000640600 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
SLC35A3-221ENST00000640600 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
SLC35A3-221ENST00000640600 RB1CC1Q8TDY2 1594 aa24.15■■□□□ 1.46
SLC35A3-221ENST00000640600 PABPN1Q86U42 306 aaKnown RBP eCLIP24.04■■□□□ 1.44
SLC35A3-221ENST00000640600 UBTFP17480 764 aaKnown RBP24.01■■□□□ 1.43
SLC35A3-221ENST00000640600 ZEB1P37275 1124 aaPredicted RBP23.93■■□□□ 1.42
SLC35A3-221ENST00000640600 SCAF1Q9H7N4 1312 aaKnown RBP23.91■■□□□ 1.42
SLC35A3-221ENST00000640600 YTHDC1Q96MU7 727 aaKnown RBP23.9■■□□□ 1.42
SLC35A3-221ENST00000640600 MROH2BQ7Z745 1585 aa23.84■■□□□ 1.41
SLC35A3-221ENST00000640600 HNRNPUL2Q1KMD3 747 aaKnown RBP23.82■■□□□ 1.4
SLC35A3-221ENST00000640600 WIZO95785 1651 aa23.71■■□□□ 1.39
SLC35A3-221ENST00000640600 NEUROD1Q13562 356 aa23.65■■□□□ 1.38
SLC35A3-221ENST00000640600 DIEXFQ68CQ4 756 aaKnown RBP23.64■■□□□ 1.37
SLC35A3-221ENST00000640600 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
SLC35A3-221ENST00000640600 SOGA1O94964 1423 aa23.54■■□□□ 1.36
SLC35A3-221ENST00000640600 GTF3C3Q9Y5Q9 886 aa23.53■■□□□ 1.36
SLC35A3-221ENST00000640600 CCDC88BA6NC98 1476 aa23.51■■□□□ 1.35
SLC35A3-221ENST00000640600 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
SLC35A3-221ENST00000640600 CSRNP3Q8WYN3 585 aa23.44■■□□□ 1.34
SLC35A3-221ENST00000640600 ITGAEP38570 1179 aa23.41■■□□□ 1.34
SLC35A3-221ENST00000640600 ACIN1Q9UKV3 1341 aaKnown RBP23.38■■□□□ 1.33
SLC35A3-221ENST00000640600 NACADO15069 1562 aa23.38■■□□□ 1.33
SLC35A3-221ENST00000640600 APLP2Q06481 763 aa23.37■■□□□ 1.33
SLC35A3-221ENST00000640600 CEP162Q5TB80 1403 aa23.34■■□□□ 1.33
SLC35A3-221ENST00000640600 CENPBP07199 599 aaPredicted RBP23.25■■□□□ 1.31
SLC35A3-221ENST00000640600 MIER1Q8N108 512 aa23.2■■□□□ 1.3
SLC35A3-221ENST00000640600 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
SLC35A3-221ENST00000640600 ATP1B4Q9UN42 357 aaPredicted RBP23.15■■□□□ 1.3
SLC35A3-221ENST00000640600 BAZ1AQ9NRL2 1556 aaPredicted RBP23.07■■□□□ 1.28
SLC35A3-221ENST00000640600 TNIKQ9UKE5 1360 aa22.97■■□□□ 1.27
SLC35A3-221ENST00000640600 WRNQ14191 1432 aaPredicted RBP eCLIP22.95■■□□□ 1.26
SLC35A3-221ENST00000640600 P3H3Q8IVL6 736 aa22.94■■□□□ 1.26
SLC35A3-221ENST00000640600 CLIP1P30622 1438 aa22.91■■□□□ 1.26
SLC35A3-221ENST00000640600 SMARCA2P51531 1590 aa22.91■■□□□ 1.26
SLC35A3-221ENST00000640600 TOP2AP11388 1531 aaKnown RBP22.88■■□□□ 1.25
SLC35A3-221ENST00000640600 KANK4Q5T7N3 995 aaPredicted RBP22.88■■□□□ 1.25
SLC35A3-221ENST00000640600 PELP1Q8IZL8 1130 aaKnown RBP22.87■■□□□ 1.25
SLC35A3-221ENST00000640600 SMARCA4P51532 1647 aa22.87■■□□□ 1.25
SLC35A3-221ENST00000640600 HIRIP3Q9BW71 556 aaPredicted RBP22.85■■□□□ 1.25
SLC35A3-221ENST00000640600 GOLGA3Q08378 1498 aa22.82■■□□□ 1.24
SLC35A3-221ENST00000640600 EIF4G1Q04637 1599 aaKnown RBP22.82■■□□□ 1.24
SLC35A3-221ENST00000640600 RAPGEF2Q9Y4G8 1499 aa22.78■■□□□ 1.24
SLC35A3-221ENST00000640600 BCANQ96GW7 911 aa22.76■■□□□ 1.23
SLC35A3-221ENST00000640600 FAM50AQ14320 339 aaKnown RBP22.7■■□□□ 1.22
SLC35A3-221ENST00000640600 KCNH8Q96L42 1107 aa22.7■■□□□ 1.22
SLC35A3-221ENST00000640600 UNC13AQ9UPW8 1703 aa22.67■■□□□ 1.22
SLC35A3-221ENST00000640600 SYNJ1O43426 1573 aa22.64■■□□□ 1.21
SLC35A3-221ENST00000640600 BAZ1BQ9UIG0 1483 aaKnown RBP22.6■■□□□ 1.21
SLC35A3-221ENST00000640600 CEP164Q9UPV0 1460 aa22.6■■□□□ 1.21
SLC35A3-221ENST00000640600 CNGB1Q14028 1251 aaPredicted RBP22.56■■□□□ 1.2
SLC35A3-221ENST00000640600 ARID3CA6NKF2 412 aa22.55■■□□□ 1.2
SLC35A3-221ENST00000640600 SIN3AQ96ST3 1273 aa22.55■■□□□ 1.2
SLC35A3-221ENST00000640600 VPS8Q8N3P4 1428 aa22.54■■□□□ 1.2
SLC35A3-221ENST00000640600 EEA1Q15075 1411 aa22.53■■□□□ 1.2
SLC35A3-221ENST00000640600 DDX10Q13206 875 aaKnown RBP22.51■■□□□ 1.19
SLC35A3-221ENST00000640600 ATAD2BQ9ULI0 1458 aa22.48■■□□□ 1.19
SLC35A3-221ENST00000640600 BICRAQ9NZM4 1560 aa22.47■■□□□ 1.19
SLC35A3-221ENST00000640600 TRIM52Q96A61 297 aa22.39■■□□□ 1.17
SLC35A3-221ENST00000640600 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
SLC35A3-221ENST00000640600 KIF21BO75037 1637 aa22.36■■□□□ 1.17
SLC35A3-221ENST00000640600 SENP3-EIF4A1A0A087X0R7 540 aa22.31■■□□□ 1.16
SLC35A3-221ENST00000640600 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
SLC35A3-221ENST00000640600 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
SLC35A3-221ENST00000640600 FKBP8Q14318 412 aa22.23■■□□□ 1.15
SLC35A3-221ENST00000640600 IRX6P78412 446 aaPredicted RBP22.22■■□□□ 1.15
SLC35A3-221ENST00000640600 CHIC2Q9UKJ5 165 aa22.22■■□□□ 1.15
SLC35A3-221ENST00000640600 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
SLC35A3-221ENST00000640600 RAB3GAP2Q9H2M9 1393 aa22.19■■□□□ 1.14
SLC35A3-221ENST00000640600 CUX2O14529 1486 aa22.17■■□□□ 1.14
SLC35A3-221ENST00000640600 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
SLC35A3-221ENST00000640600 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
SLC35A3-221ENST00000640600 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
SLC35A3-221ENST00000640600 CUX1P39880 1505 aa22.06■■□□□ 1.12
SLC35A3-221ENST00000640600 RRP7BPQ9NSQ0 103 aa22.06■■□□□ 1.12
SLC35A3-221ENST00000640600 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
SLC35A3-221ENST00000640600 ARHGAP35Q9NRY4 1499 aa22.03■■□□□ 1.12
SLC35A3-221ENST00000640600 FOXD1Q16676 465 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms