RNA–Protein interactions for RNA: ENST00000640395.1

AC099654.10-201, humanhuman

BASIC

Gene AC099654.10, Length 161 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC099654.10-201ENST00000640395 AEBP2Q6ZN18 517 aaPredicted RBP29.24■■■□□ 2.27
AC099654.10-201ENST00000640395 CHIC1Q5VXU3 224 aa27.52■■■□□ 2
AC099654.10-201ENST00000640395 SENP3Q9H4L4 574 aaPredicted RBP25.21■■□□□ 1.63
AC099654.10-201ENST00000640395 PHF23Q9BUL5 403 aaPredicted RBP24.73■■□□□ 1.55
AC099654.10-201ENST00000640395 FOXD1Q16676 465 aa23.45■■□□□ 1.34
AC099654.10-201ENST00000640395 POTEDQ86YR6 584 aa22.61■■□□□ 1.21
AC099654.10-201ENST00000640395 MSH5O43196 834 aa22.29■■□□□ 1.16
AC099654.10-201ENST00000640395 PIAS4Q8N2W9 510 aaPredicted RBP21.88■■□□□ 1.09
AC099654.10-201ENST00000640395 PLPPR3Q6T4P5 718 aa21.65■■□□□ 1.06
AC099654.10-201ENST00000640395 PPP6R1Q9UPN7 881 aa21.44■■□□□ 1.02
AC099654.10-201ENST00000640395 ADRA2BP18089 450 aa21.39■■□□□ 1.01
AC099654.10-201ENST00000640395 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
AC099654.10-201ENST00000640395 MAPK8IP2Q13387 824 aaPredicted RBP19.79■□□□□ 0.76
AC099654.10-201ENST00000640395 SCAF1Q9H7N4 1312 aaKnown RBP19.75■□□□□ 0.75
AC099654.10-201ENST00000640395 CACNB1Q02641 598 aaPredicted RBP19.48■□□□□ 0.71
AC099654.10-201ENST00000640395 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
AC099654.10-201ENST00000640395 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
AC099654.10-201ENST00000640395 HOXD11P31277 338 aaPredicted RBP18.86■□□□□ 0.61
AC099654.10-201ENST00000640395 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
AC099654.10-201ENST00000640395 CNKSR2Q8WXI2 1034 aa18.66■□□□□ 0.58
AC099654.10-201ENST00000640395 C1QBPQ07021 282 aaKnown RBP18.64■□□□□ 0.57
AC099654.10-201ENST00000640395 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
AC099654.10-201ENST00000640395 DNAJC5BQ9UF47 199 aa18.36■□□□□ 0.53
AC099654.10-201ENST00000640395 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.1■□□□□ 0.49
AC099654.10-201ENST00000640395 NCBP3Q53F19 620 aaKnown RBP18.07■□□□□ 0.48
AC099654.10-201ENST00000640395 NPM3O75607 178 aaKnown RBP17.68■□□□□ 0.42
AC099654.10-201ENST00000640395 POTEHQ6S545 545 aa17.65■□□□□ 0.42
AC099654.10-201ENST00000640395 CAPN15O75808 1086 aa17.56■□□□□ 0.4
AC099654.10-201ENST00000640395 U3KPZ7 1027 aaPredicted RBP17.53■□□□□ 0.4
AC099654.10-201ENST00000640395 DSG3P32926 999 aa17.49■□□□□ 0.39
AC099654.10-201ENST00000640395 SPINK5Q9NQ38 1064 aaPredicted RBP17.45■□□□□ 0.38
AC099654.10-201ENST00000640395 APLP2Q06481 763 aa17.2■□□□□ 0.34
AC099654.10-201ENST00000640395 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
AC099654.10-201ENST00000640395 ZNF219Q9P2Y4 722 aaPredicted RBP17.1■□□□□ 0.33
AC099654.10-201ENST00000640395 ABCB7O75027 752 aa17.05■□□□□ 0.32
AC099654.10-201ENST00000640395 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
AC099654.10-201ENST00000640395 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
AC099654.10-201ENST00000640395 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
AC099654.10-201ENST00000640395 SAMD1Q6SPF0 538 aaPredicted RBP16.85■□□□□ 0.29
AC099654.10-201ENST00000640395 RBM42Q9BTD8 480 aaKnown RBP16.84■□□□□ 0.29
AC099654.10-201ENST00000640395 KCNA4P22459 653 aa16.82■□□□□ 0.28
AC099654.10-201ENST00000640395 CHRDL2Q6WN34 429 aa16.62■□□□□ 0.25
AC099654.10-201ENST00000640395 POLA2Q14181 598 aa16.5■□□□□ 0.23
AC099654.10-201ENST00000640395 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
AC099654.10-201ENST00000640395 SP7Q8TDD2 431 aaPredicted RBP16.29■□□□□ 0.2
AC099654.10-201ENST00000640395 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
AC099654.10-201ENST00000640395 ZBTB12Q9Y330 459 aaPredicted RBP16.23■□□□□ 0.19
AC099654.10-201ENST00000640395 REM2Q8IYK8 340 aaPredicted RBP16.08■□□□□ 0.16
AC099654.10-201ENST00000640395 PIP4P2Q8N4L2 257 aa16.06■□□□□ 0.16
AC099654.10-201ENST00000640395 HAX1O00165 279 aa16.01■□□□□ 0.15
AC099654.10-201ENST00000640395 OSCARQ8IYS5 282 aa16■□□□□ 0.15
AC099654.10-201ENST00000640395 ATF5Q9Y2D1 282 aaPredicted RBP15.96■□□□□ 0.15
AC099654.10-201ENST00000640395 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
AC099654.10-201ENST00000640395 PITPNM1O00562 1244 aa15.91■□□□□ 0.14
AC099654.10-201ENST00000640395 FXR2P51116 673 aaKnown RBP eCLIP15.86■□□□□ 0.13
AC099654.10-201ENST00000640395 SLC4A1APQ9BWU0 796 aaKnown RBP15.85■□□□□ 0.13
AC099654.10-201ENST00000640395 SPDYE2BA6NHP3 402 aa15.62■□□□□ 0.09
AC099654.10-201ENST00000640395 SPDYE6P0CI01 402 aa15.62■□□□□ 0.09
AC099654.10-201ENST00000640395 SPDYE2Q495Y8 402 aa15.62■□□□□ 0.09
AC099654.10-201ENST00000640395 FBLN2P98095 1184 aa15.59■□□□□ 0.09
AC099654.10-201ENST00000640395 EVX2Q03828 476 aa15.59■□□□□ 0.09
AC099654.10-201ENST00000640395 PRKAR2AP13861 404 aaKnown RBP15.54■□□□□ 0.08
AC099654.10-201ENST00000640395 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
AC099654.10-201ENST00000640395 ATXN8OSP0DMR3 200 aa15.51■□□□□ 0.07
AC099654.10-201ENST00000640395 SPDYE1Q8NFV5 336 aaPredicted RBP15.51■□□□□ 0.07
AC099654.10-201ENST00000640395 C19orf67A6NJJ6 358 aa15.38■□□□□ 0.05
AC099654.10-201ENST00000640395 ZBTB22O15209 634 aa15.38■□□□□ 0.05
AC099654.10-201ENST00000640395 ZNF692Q9BU19 519 aaPredicted RBP15.35■□□□□ 0.05
AC099654.10-201ENST00000640395 GABBR2O75899 941 aa15.3■□□□□ 0.04
AC099654.10-201ENST00000640395 LHX8Q68G74 356 aa15.28■□□□□ 0.04
AC099654.10-201ENST00000640395 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.04
AC099654.10-201ENST00000640395 MKRN4PQ13434 485 aaPredicted RBP15.21■□□□□ 0.03
AC099654.10-201ENST00000640395 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
AC099654.10-201ENST00000640395 PRR29P0C7W0 189 aa15.18■□□□□ 0.02
AC099654.10-201ENST00000640395 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
AC099654.10-201ENST00000640395 CD44P16070 742 aaKnown RBP15.02■□□□□ -0
AC099654.10-201ENST00000640395 CLCN6P51797 869 aa14.98□□□□□ -0.01
AC099654.10-201ENST00000640395 FARP1Q9Y4F1 1045 aaPredicted RBP14.94□□□□□ -0.02
AC099654.10-201ENST00000640395 DCBLD2Q96PD2 775 aa14.89□□□□□ -0.03
AC099654.10-201ENST00000640395 POTEIP0CG38 1075 aa14.88□□□□□ -0.03
AC099654.10-201ENST00000640395 PLSCR2Q9NRY7 297 aa14.83□□□□□ -0.04
AC099654.10-201ENST00000640395 ZNF579Q8NAF0 562 aaKnown RBP14.73□□□□□ -0.05
AC099654.10-201ENST00000640395 ZRANB1Q9UGI0 708 aa14.73□□□□□ -0.05
AC099654.10-201ENST00000640395 STAG3Q9UJ98 1225 aa14.62□□□□□ -0.07
AC099654.10-201ENST00000640395 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
AC099654.10-201ENST00000640395 GALR2O43603 387 aaPredicted RBP14.56□□□□□ -0.08
AC099654.10-201ENST00000640395 CREBZFQ9NS37 354 aa14.56□□□□□ -0.08
AC099654.10-201ENST00000640395 OTUD5Q96G74 571 aa14.5□□□□□ -0.09
AC099654.10-201ENST00000640395 POTEMA6NI47 508 aa14.42□□□□□ -0.1
AC099654.10-201ENST00000640395 NPM1P06748 294 aaKnown RBP eCLIP14.42□□□□□ -0.1
AC099654.10-201ENST00000640395 PHF12Q96QT6 1004 aa14.42□□□□□ -0.1
AC099654.10-201ENST00000640395 POTEB2H3BUK9 544 aa14.39□□□□□ -0.11
AC099654.10-201ENST00000640395 POTEGQ6S5H5 508 aa14.36□□□□□ -0.11
AC099654.10-201ENST00000640395 SPDYE4A6NLX3 237 aa14.32□□□□□ -0.12
AC099654.10-201ENST00000640395 METRNQ9UJH8 293 aa14.28□□□□□ -0.12
AC099654.10-201ENST00000640395 PELP1Q8IZL8 1130 aaKnown RBP14.27□□□□□ -0.13
AC099654.10-201ENST00000640395 PCDH10Q9P2E7 1040 aa14.27□□□□□ -0.13
AC099654.10-201ENST00000640395 SLC39A7Q92504 469 aa14.26□□□□□ -0.13
AC099654.10-201ENST00000640395 MAMSTRQ6ZN01 415 aa14.25□□□□□ -0.13
AC099654.10-201ENST00000640395 C7P10643 843 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms