RNA–Protein interactions for RNA: ENST00000640232.1

COA1-220, Transcript of cytochrome c oxidase assembly factor 1 homolog, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene COA1, Length 192 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COA1-220ENST00000640232 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
COA1-220ENST00000640232 AEBP2Q6ZN18 517 aaPredicted RBP11.91□□□□□ -0.5
COA1-220ENST00000640232 PHF23Q9BUL5 403 aaPredicted RBP10.98□□□□□ -0.65
COA1-220ENST00000640232 PLPPR3Q6T4P5 718 aa10.3□□□□□ -0.76
COA1-220ENST00000640232 EHMT2Q96KQ7 1210 aa10.16□□□□□ -0.78
COA1-220ENST00000640232 KCNA4P22459 653 aa9.92□□□□□ -0.82
COA1-220ENST00000640232 SENP3Q9H4L4 574 aaPredicted RBP9.87□□□□□ -0.83
COA1-220ENST00000640232 NISCHQ9Y2I1 1504 aa9.87□□□□□ -0.83
COA1-220ENST00000640232 CSRNP3Q8WYN3 585 aa9.73□□□□□ -0.85
COA1-220ENST00000640232 ADRA2BP18089 450 aa9.71□□□□□ -0.86
COA1-220ENST00000640232 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
COA1-220ENST00000640232 SLC4A1APQ9BWU0 796 aaKnown RBP9.53□□□□□ -0.88
COA1-220ENST00000640232 PPP6R1Q9UPN7 881 aa9.43□□□□□ -0.9
COA1-220ENST00000640232 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
COA1-220ENST00000640232 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
COA1-220ENST00000640232 ZBTB22O15209 634 aa9.2□□□□□ -0.94
COA1-220ENST00000640232 PPP4R3CPQ6ZMV5 832 aa9.2□□□□□ -0.94
COA1-220ENST00000640232 FOXD1Q16676 465 aa9.13□□□□□ -0.95
COA1-220ENST00000640232 NCBP3Q53F19 620 aaKnown RBP9.1□□□□□ -0.95
COA1-220ENST00000640232 NPM3O75607 178 aaKnown RBP9.08□□□□□ -0.96
COA1-220ENST00000640232 FOXD4L1Q9NU39 408 aa8.85□□□□□ -0.99
COA1-220ENST00000640232 CCDC180Q9P1Z9 1646 aa8.8□□□□□ -1
COA1-220ENST00000640232 PIAS4Q8N2W9 510 aaPredicted RBP8.75□□□□□ -1.01
COA1-220ENST00000640232 CNKSR2Q8WXI2 1034 aa8.75□□□□□ -1.01
COA1-220ENST00000640232 DNAJC5BQ9UF47 199 aa8.73□□□□□ -1.01
COA1-220ENST00000640232 FKBP8Q14318 412 aa8.69□□□□□ -1.02
COA1-220ENST00000640232 DAXXQ9UER7 740 aaPredicted RBP8.59□□□□□ -1.03
COA1-220ENST00000640232 PRKCSHP14314 528 aaPredicted RBP8.53□□□□□ -1.04
COA1-220ENST00000640232 PLCB2Q00722 1185 aa8.53□□□□□ -1.04
COA1-220ENST00000640232 ABCC9O60706 1549 aa8.51□□□□□ -1.05
COA1-220ENST00000640232 SCAF1Q9H7N4 1312 aaKnown RBP8.5□□□□□ -1.05
COA1-220ENST00000640232 ATXN8OSP0DMR3 200 aa8.46□□□□□ -1.06
COA1-220ENST00000640232 BCANQ96GW7 911 aa8.44□□□□□ -1.06
COA1-220ENST00000640232 TAOK2Q9UL54 1235 aa8.44□□□□□ -1.06
COA1-220ENST00000640232 SLC4A2P04920 1241 aa8.42□□□□□ -1.06
COA1-220ENST00000640232 RNF216Q9NWF9 866 aaPredicted RBP8.4□□□□□ -1.06
COA1-220ENST00000640232 HAP1P54257 671 aaPredicted RBP8.36□□□□□ -1.07
COA1-220ENST00000640232 MAPK8IP2Q13387 824 aaPredicted RBP8.33□□□□□ -1.08
COA1-220ENST00000640232 MYCNP04198 464 aaPredicted RBP8.32□□□□□ -1.08
COA1-220ENST00000640232 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
COA1-220ENST00000640232 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
COA1-220ENST00000640232 TPRNQ4KMQ1 711 aa8.27□□□□□ -1.09
COA1-220ENST00000640232 ARXQ96QS3 562 aa8.25□□□□□ -1.09
COA1-220ENST00000640232 DNAJC5Q9H3Z4 198 aa8.25□□□□□ -1.09
COA1-220ENST00000640232 ZCCHC6Q5VYS8 1495 aaKnown RBP8.25□□□□□ -1.09
COA1-220ENST00000640232 HOXD11P31277 338 aaPredicted RBP8.2□□□□□ -1.1
COA1-220ENST00000640232 RB1CC1Q8TDY2 1594 aa8.19□□□□□ -1.1
COA1-220ENST00000640232 UNC13AQ9UPW8 1703 aa8.19□□□□□ -1.1
COA1-220ENST00000640232 TIMELESSQ9UNS1 1208 aa8.17□□□□□ -1.1
COA1-220ENST00000640232 KDM2AQ9Y2K7 1162 aa8.17□□□□□ -1.1
COA1-220ENST00000640232 NACADO15069 1562 aa8.16□□□□□ -1.1
COA1-220ENST00000640232 ATF5Q9Y2D1 282 aaPredicted RBP8.14□□□□□ -1.11
COA1-220ENST00000640232 SCRIBQ14160 1630 aa8.11□□□□□ -1.11
COA1-220ENST00000640232 DCAF1Q9Y4B6 1507 aa8.1□□□□□ -1.11
COA1-220ENST00000640232 FBLN2P98095 1184 aa8.1□□□□□ -1.11
COA1-220ENST00000640232 FBXO3Q9UK99 471 aa8.1□□□□□ -1.11
COA1-220ENST00000640232 PKD2Q13563 968 aa8.08□□□□□ -1.12
COA1-220ENST00000640232 TULP1O00294 542 aaPredicted RBP8.07□□□□□ -1.12
COA1-220ENST00000640232 MYO15BQ96JP2 1530 aa8.06□□□□□ -1.12
COA1-220ENST00000640232 VASPP50552 380 aaPredicted RBP8.04□□□□□ -1.12
COA1-220ENST00000640232 DMRT2Q9Y5R5 561 aa8.04□□□□□ -1.12
COA1-220ENST00000640232 MSH5O43196 834 aa8.03□□□□□ -1.12
COA1-220ENST00000640232 IFNLR1Q8IU57 520 aaPredicted RBP8.03□□□□□ -1.12
COA1-220ENST00000640232 PROM2Q8N271 834 aa8.01□□□□□ -1.13
COA1-220ENST00000640232 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
COA1-220ENST00000640232 BBXQ8WY36 941 aaPredicted RBP7.99□□□□□ -1.13
COA1-220ENST00000640232 SHROOM4Q9ULL8 1493 aa7.99□□□□□ -1.13
COA1-220ENST00000640232 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
COA1-220ENST00000640232 NPM1P06748 294 aaKnown RBP eCLIP7.96□□□□□ -1.14
COA1-220ENST00000640232 PAXIP1Q6ZW49 1069 aaPredicted RBP7.96□□□□□ -1.14
COA1-220ENST00000640232 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.96□□□□□ -1.14
COA1-220ENST00000640232 BICRAQ9NZM4 1560 aa7.96□□□□□ -1.14
COA1-220ENST00000640232 PABPN1Q86U42 306 aaKnown RBP eCLIP7.95□□□□□ -1.14
COA1-220ENST00000640232 RANGAP1P46060 587 aaPredicted RBP7.94□□□□□ -1.14
COA1-220ENST00000640232 SPDYE4A6NLX3 237 aa7.93□□□□□ -1.14
COA1-220ENST00000640232 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
COA1-220ENST00000640232 CFAP44Q96MT7 982 aa7.91□□□□□ -1.14
COA1-220ENST00000640232 TSHZ2Q9NRE2 1034 aa7.9□□□□□ -1.14
COA1-220ENST00000640232 TTBK1Q5TCY1 1321 aaPredicted RBP7.89□□□□□ -1.15
COA1-220ENST00000640232 SAMD1Q6SPF0 538 aaPredicted RBP7.87□□□□□ -1.15
COA1-220ENST00000640232 APLP2Q06481 763 aa7.84□□□□□ -1.15
COA1-220ENST00000640232 TMEM132AQ24JP5 1023 aa7.84□□□□□ -1.15
COA1-220ENST00000640232 PELP1Q8IZL8 1130 aaKnown RBP7.84□□□□□ -1.15
COA1-220ENST00000640232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.83□□□□□ -1.16
COA1-220ENST00000640232 HNRNPUL2Q1KMD3 747 aaKnown RBP7.83□□□□□ -1.16
COA1-220ENST00000640232 ZNF219Q9P2Y4 722 aaPredicted RBP7.83□□□□□ -1.16
COA1-220ENST00000640232 MKRN4PQ13434 485 aaPredicted RBP7.82□□□□□ -1.16
COA1-220ENST00000640232 SPRYD3Q8NCJ5 442 aa7.82□□□□□ -1.16
COA1-220ENST00000640232 NBR1Q14596 966 aa7.81□□□□□ -1.16
COA1-220ENST00000640232 ECM2O94769 699 aaPredicted RBP7.8□□□□□ -1.16
COA1-220ENST00000640232 U3KPZ7 1027 aaPredicted RBP7.78□□□□□ -1.16
COA1-220ENST00000640232 MYT1Q01538 1121 aa7.77□□□□□ -1.17
COA1-220ENST00000640232 RGL2O15211 777 aa7.76□□□□□ -1.17
COA1-220ENST00000640232 SPOCK2Q92563 424 aa7.74□□□□□ -1.17
COA1-220ENST00000640232 EIF4G1Q04637 1599 aaKnown RBP7.74□□□□□ -1.17
COA1-220ENST00000640232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.72□□□□□ -1.17
COA1-220ENST00000640232 CC2D2AQ9P2K1 1620 aa7.71□□□□□ -1.17
COA1-220ENST00000640232 CECR2Q9BXF3 1484 aa7.71□□□□□ -1.18
COA1-220ENST00000640232 C14orf37Q86TY3 774 aa7.71□□□□□ -1.18
COA1-220ENST00000640232 SMARCA4P51532 1647 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms