RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
HNRNPU-221ENST00000639824 CHIC1Q5VXU3 224 aa27.3■■□□□ 1.96
HNRNPU-221ENST00000639824 NISCHQ9Y2I1 1504 aa24.37■■□□□ 1.49
HNRNPU-221ENST00000639824 SENP3Q9H4L4 574 aaPredicted RBP24.19■■□□□ 1.46
HNRNPU-221ENST00000639824 PHF23Q9BUL5 403 aaPredicted RBP23.91■■□□□ 1.42
HNRNPU-221ENST00000639824 FOXD1Q16676 465 aa22.42■■□□□ 1.18
HNRNPU-221ENST00000639824 PLPPR3Q6T4P5 718 aa22.04■■□□□ 1.12
HNRNPU-221ENST00000639824 PPP6R1Q9UPN7 881 aa21.22■□□□□ 0.99
HNRNPU-221ENST00000639824 ADRA2BP18089 450 aa21.21■□□□□ 0.99
HNRNPU-221ENST00000639824 CCDC180Q9P1Z9 1646 aa21.12■□□□□ 0.97
HNRNPU-221ENST00000639824 PIAS4Q8N2W9 510 aaPredicted RBP21.1■□□□□ 0.97
HNRNPU-221ENST00000639824 MSH5O43196 834 aa20.92■□□□□ 0.94
HNRNPU-221ENST00000639824 ZCCHC6Q5VYS8 1495 aaKnown RBP20.57■□□□□ 0.88
HNRNPU-221ENST00000639824 DCAF1Q9Y4B6 1507 aa20.23■□□□□ 0.83
HNRNPU-221ENST00000639824 SHROOM4Q9ULL8 1493 aa20.09■□□□□ 0.81
HNRNPU-221ENST00000639824 DCAF8L2P0C7V8 631 aa19.87■□□□□ 0.77
HNRNPU-221ENST00000639824 MYO15BQ96JP2 1530 aa19.82■□□□□ 0.76
HNRNPU-221ENST00000639824 POTEDQ86YR6 584 aa19.69■□□□□ 0.74
HNRNPU-221ENST00000639824 SUPT5HO00267 1087 aaKnown RBP19.6■□□□□ 0.73
HNRNPU-221ENST00000639824 SCAF1Q9H7N4 1312 aaKnown RBP19.53■□□□□ 0.72
HNRNPU-221ENST00000639824 NACADO15069 1562 aa19.53■□□□□ 0.72
HNRNPU-221ENST00000639824 ABCC9O60706 1549 aa19.38■□□□□ 0.69
HNRNPU-221ENST00000639824 SCRIBQ14160 1630 aa19.37■□□□□ 0.69
HNRNPU-221ENST00000639824 MAPK8IP2Q13387 824 aaPredicted RBP19.35■□□□□ 0.69
HNRNPU-221ENST00000639824 PPP4R3CPQ6ZMV5 832 aa19.34■□□□□ 0.69
HNRNPU-221ENST00000639824 RB1CC1Q8TDY2 1594 aa19.24■□□□□ 0.67
HNRNPU-221ENST00000639824 DMRT2Q9Y5R5 561 aa19.21■□□□□ 0.67
HNRNPU-221ENST00000639824 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
HNRNPU-221ENST00000639824 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
HNRNPU-221ENST00000639824 BAZ1AQ9NRL2 1556 aaPredicted RBP18.82■□□□□ 0.6
HNRNPU-221ENST00000639824 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
HNRNPU-221ENST00000639824 CECR2Q9BXF3 1484 aa18.81■□□□□ 0.6
HNRNPU-221ENST00000639824 MROH2BQ7Z745 1585 aa18.8■□□□□ 0.6
HNRNPU-221ENST00000639824 NCBP3Q53F19 620 aaKnown RBP18.78■□□□□ 0.6
HNRNPU-221ENST00000639824 WIZO95785 1651 aa18.69■□□□□ 0.58
HNRNPU-221ENST00000639824 HOXD11P31277 338 aaPredicted RBP18.65■□□□□ 0.58
HNRNPU-221ENST00000639824 SMARCA4P51532 1647 aa18.64■□□□□ 0.58
HNRNPU-221ENST00000639824 RNF216Q9NWF9 866 aaPredicted RBP18.63■□□□□ 0.57
HNRNPU-221ENST00000639824 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
HNRNPU-221ENST00000639824 TOP2AP11388 1531 aaKnown RBP18.56■□□□□ 0.56
HNRNPU-221ENST00000639824 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
HNRNPU-221ENST00000639824 DCAF8L1A6NGE4 600 aa18.45■□□□□ 0.54
HNRNPU-221ENST00000639824 PEG3Q9GZU2 1588 aa18.42■□□□□ 0.54
HNRNPU-221ENST00000639824 NPM3O75607 178 aaKnown RBP18.42■□□□□ 0.54
HNRNPU-221ENST00000639824 EIF4G1Q04637 1599 aaKnown RBP18.41■□□□□ 0.54
HNRNPU-221ENST00000639824 KCNA4P22459 653 aa18.39■□□□□ 0.54
HNRNPU-221ENST00000639824 SMARCA2P51531 1590 aa18.37■□□□□ 0.53
HNRNPU-221ENST00000639824 CCDC88BA6NC98 1476 aa18.32■□□□□ 0.52
HNRNPU-221ENST00000639824 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
HNRNPU-221ENST00000639824 LOC105371045A0A1W2PR82 267 aa18.26■□□□□ 0.51
HNRNPU-221ENST00000639824 ATAD2BQ9ULI0 1458 aa18.18■□□□□ 0.5
HNRNPU-221ENST00000639824 BAZ1BQ9UIG0 1483 aaKnown RBP18.14■□□□□ 0.49
HNRNPU-221ENST00000639824 ABCC8Q09428 1581 aa18.06■□□□□ 0.48
HNRNPU-221ENST00000639824 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
HNRNPU-221ENST00000639824 EEA1Q15075 1411 aa18.05■□□□□ 0.48
HNRNPU-221ENST00000639824 HMGXB3Q12766 1538 aa18.03■□□□□ 0.48
HNRNPU-221ENST00000639824 PCGF6Q9BYE7 350 aa18.01■□□□□ 0.47
HNRNPU-221ENST00000639824 TRIM26Q12899 539 aaPredicted RBP17.98■□□□□ 0.47
HNRNPU-221ENST00000639824 NCAPD3P42695 1498 aa17.97■□□□□ 0.47
HNRNPU-221ENST00000639824 DNAJC5BQ9UF47 199 aa17.96■□□□□ 0.47
HNRNPU-221ENST00000639824 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
HNRNPU-221ENST00000639824 HRCP23327 699 aa17.95■□□□□ 0.46
HNRNPU-221ENST00000639824 RNF39Q9H2S5 420 aa17.83■□□□□ 0.45
HNRNPU-221ENST00000639824 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
HNRNPU-221ENST00000639824 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.82■□□□□ 0.441e-14■■□□□ 12.6
HNRNPU-221ENST00000639824 SOGA1O94964 1423 aa17.81■□□□□ 0.44
HNRNPU-221ENST00000639824 CSRNP3Q8WYN3 585 aa17.8■□□□□ 0.44
HNRNPU-221ENST00000639824 TNIKQ9UKE5 1360 aa17.79■□□□□ 0.44
HNRNPU-221ENST00000639824 TOP2BQ02880 1626 aa17.78■□□□□ 0.44
HNRNPU-221ENST00000639824 BIVM-ERCC5R4GMW8 1640 aa17.77■□□□□ 0.44
HNRNPU-221ENST00000639824 GOLGA3Q08378 1498 aa17.77■□□□□ 0.43
HNRNPU-221ENST00000639824 KIF21BO75037 1637 aa17.75■□□□□ 0.43
HNRNPU-221ENST00000639824 PRDM2Q13029 1718 aa17.74■□□□□ 0.43
HNRNPU-221ENST00000639824 CEP164Q9UPV0 1460 aa17.72■□□□□ 0.43
HNRNPU-221ENST00000639824 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
HNRNPU-221ENST00000639824 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
HNRNPU-221ENST00000639824 CFTRP13569 1480 aa17.7■□□□□ 0.42
HNRNPU-221ENST00000639824 CEP162Q5TB80 1403 aa17.7■□□□□ 0.42
HNRNPU-221ENST00000639824 RUSC2Q8N2Y8 1516 aa17.68■□□□□ 0.42
HNRNPU-221ENST00000639824 C1QBPQ07021 282 aaKnown RBP17.64■□□□□ 0.41
HNRNPU-221ENST00000639824 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
HNRNPU-221ENST00000639824 UBTFP17480 764 aaKnown RBP17.61■□□□□ 0.41
HNRNPU-221ENST00000639824 CC2D2AQ9P2K1 1620 aa17.59■□□□□ 0.41
HNRNPU-221ENST00000639824 CUX1P39880 1505 aa17.55■□□□□ 0.4
HNRNPU-221ENST00000639824 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
HNRNPU-221ENST00000639824 CADPSQ9ULU8 1353 aa17.54■□□□□ 0.4
HNRNPU-221ENST00000639824 SLC4A1APQ9BWU0 796 aaKnown RBP17.5■□□□□ 0.39
HNRNPU-221ENST00000639824 KIF27Q86VH2 1401 aa17.49■□□□□ 0.39
HNRNPU-221ENST00000639824 CLIP1P30622 1438 aa17.47■□□□□ 0.39
HNRNPU-221ENST00000639824 SLC4A2P04920 1241 aa17.46■□□□□ 0.39
HNRNPU-221ENST00000639824 PRXQ9BXM0 1461 aa17.45■□□□□ 0.38
HNRNPU-221ENST00000639824 RAPGEF2Q9Y4G8 1499 aa17.45■□□□□ 0.38
HNRNPU-221ENST00000639824 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
HNRNPU-221ENST00000639824 VPS8Q8N3P4 1428 aa17.4■□□□□ 0.38
HNRNPU-221ENST00000639824 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
HNRNPU-221ENST00000639824 LAMC3Q9Y6N6 1575 aa17.33■□□□□ 0.37
HNRNPU-221ENST00000639824 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.37
HNRNPU-221ENST00000639824 DNMBPQ6XZF7 1577 aa17.32■□□□□ 0.36
HNRNPU-221ENST00000639824 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
HNRNPU-221ENST00000639824 APLP2Q06481 763 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms