RNA–Protein interactions for RNA: ENST00000639344.1

KCNMA1-257, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-257ENST00000639344 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
KCNMA1-257ENST00000639344 MYT1Q01538 1121 aa14.97□□□□□ -0.01
KCNMA1-257ENST00000639344 NISCHQ9Y2I1 1504 aa14.62□□□□□ -0.07
KCNMA1-257ENST00000639344 TTBK1Q5TCY1 1321 aaPredicted RBP14.12□□□□□ -0.15
KCNMA1-257ENST00000639344 DCAF8L2P0C7V8 631 aa14.1□□□□□ -0.15
KCNMA1-257ENST00000639344 SUPT5HO00267 1087 aaKnown RBP14.09□□□□□ -0.15
KCNMA1-257ENST00000639344 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
KCNMA1-257ENST00000639344 ERICH6Q7L0X2 663 aa13.9□□□□□ -0.18
KCNMA1-257ENST00000639344 PCGF6Q9BYE7 350 aa13.61□□□□□ -0.23
KCNMA1-257ENST00000639344 SLC24A1O60721 1099 aa13.54□□□□□ -0.24
KCNMA1-257ENST00000639344 EHMT2Q96KQ7 1210 aa13.51□□□□□ -0.25
KCNMA1-257ENST00000639344 PRKCSHP14314 528 aaPredicted RBP13.45□□□□□ -0.26
KCNMA1-257ENST00000639344 CENPBP07199 599 aaPredicted RBP13.38□□□□□ -0.27
KCNMA1-257ENST00000639344 BCL11AQ9H165 835 aa13.32□□□□□ -0.28
KCNMA1-257ENST00000639344 HRCP23327 699 aa13.31□□□□□ -0.28
KCNMA1-257ENST00000639344 FAM9AQ8IZU1 332 aaPredicted RBP13.23□□□□□ -0.29
KCNMA1-257ENST00000639344 PPARGC1BQ86YN6 1023 aaKnown RBP13.16□□□□□ -0.3
KCNMA1-257ENST00000639344 SCAF1Q9H7N4 1312 aaKnown RBP13.02□□□□□ -0.32
KCNMA1-257ENST00000639344 LOC105371045A0A1W2PR82 267 aa12.99□□□□□ -0.33
KCNMA1-257ENST00000639344 CHIC1Q5VXU3 224 aa12.98□□□□□ -0.33
KCNMA1-257ENST00000639344 EIF5BO60841 1220 aaKnown RBP12.98□□□□□ -0.33
KCNMA1-257ENST00000639344 ZEB1P37275 1124 aaPredicted RBP12.96□□□□□ -0.33
KCNMA1-257ENST00000639344 CCER1Q8TC90 406 aaPredicted RBP12.93□□□□□ -0.34
KCNMA1-257ENST00000639344 APLP2Q06481 763 aa12.91□□□□□ -0.34
KCNMA1-257ENST00000639344 TRIM41Q8WV44 630 aa12.91□□□□□ -0.34
KCNMA1-257ENST00000639344 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-257ENST00000639344 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
KCNMA1-257ENST00000639344 YTHDC1Q96MU7 727 aaKnown RBP12.82□□□□□ -0.36
KCNMA1-257ENST00000639344 DAXXQ9UER7 740 aaPredicted RBP12.78□□□□□ -0.36
KCNMA1-257ENST00000639344 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
KCNMA1-257ENST00000639344 RANGAP1P46060 587 aaPredicted RBP12.68□□□□□ -0.38
KCNMA1-257ENST00000639344 ANP32EQ9BTT0 268 aa12.67□□□□□ -0.38
KCNMA1-257ENST00000639344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.61□□□□□ -0.39
KCNMA1-257ENST00000639344 UBTFP17480 764 aaKnown RBP12.57□□□□□ -0.4
KCNMA1-257ENST00000639344 DIEXFQ68CQ4 756 aaKnown RBP12.51□□□□□ -0.41
KCNMA1-257ENST00000639344 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
KCNMA1-257ENST00000639344 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
KCNMA1-257ENST00000639344 CSRNP3Q8WYN3 585 aa12.43□□□□□ -0.42
KCNMA1-257ENST00000639344 GLIPR1L2Q4G1C9 344 aa12.42□□□□□ -0.42
KCNMA1-257ENST00000639344 HNRNPUL2Q1KMD3 747 aaKnown RBP12.42□□□□□ -0.42
KCNMA1-257ENST00000639344 MYO15BQ96JP2 1530 aa12.37□□□□□ -0.43
KCNMA1-257ENST00000639344 CCDC180Q9P1Z9 1646 aa12.34□□□□□ -0.43
KCNMA1-257ENST00000639344 ANO8Q9HCE9 1232 aaPredicted RBP12.33□□□□□ -0.44
KCNMA1-257ENST00000639344 PLEKHG5O94827 1062 aa12.31□□□□□ -0.44
KCNMA1-257ENST00000639344 NEFLP07196 543 aa12.31□□□□□ -0.44
KCNMA1-257ENST00000639344 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
KCNMA1-257ENST00000639344 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
KCNMA1-257ENST00000639344 ATP1B4Q9UN42 357 aaPredicted RBP12.28□□□□□ -0.44
KCNMA1-257ENST00000639344 ITGAEP38570 1179 aa12.27□□□□□ -0.45
KCNMA1-257ENST00000639344 CCDC136Q96JN2 1154 aa12.27□□□□□ -0.45
KCNMA1-257ENST00000639344 MYT1LQ9UL68 1186 aa12.26□□□□□ -0.45
KCNMA1-257ENST00000639344 DCAF1Q9Y4B6 1507 aa12.23□□□□□ -0.45
KCNMA1-257ENST00000639344 UBE2Q2Q8WVN8 375 aa12.19□□□□□ -0.46
KCNMA1-257ENST00000639344 RTL5Q5HYW3 569 aaPredicted RBP12.19□□□□□ -0.46
KCNMA1-257ENST00000639344 ZNF316A6NFI3 1004 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-257ENST00000639344 BCANQ96GW7 911 aa12.16□□□□□ -0.46
KCNMA1-257ENST00000639344 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
KCNMA1-257ENST00000639344 CLSPNQ9HAW4 1339 aa12.13□□□□□ -0.47
KCNMA1-257ENST00000639344 A0A0U1RQG5 324 aaPredicted RBP12.07□□□□□ -0.48
KCNMA1-257ENST00000639344 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
KCNMA1-257ENST00000639344 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-257ENST00000639344 SALL2Q9Y467 1007 aaPredicted RBP12.03□□□□□ -0.48
KCNMA1-257ENST00000639344 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.48
KCNMA1-257ENST00000639344 PDE4CQ08493 712 aa12.01□□□□□ -0.49
KCNMA1-257ENST00000639344 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
KCNMA1-257ENST00000639344 MIER1Q8N108 512 aa11.97□□□□□ -0.49
KCNMA1-257ENST00000639344 POLR3GLQ9BT43 218 aa11.93□□□□□ -0.5
KCNMA1-257ENST00000639344 VSIG10Q8N0Z9 540 aa11.92□□□□□ -0.5
KCNMA1-257ENST00000639344 PDIA4P13667 645 aaKnown RBP11.9□□□□□ -0.51
KCNMA1-257ENST00000639344 ABCC9O60706 1549 aa11.89□□□□□ -0.51
KCNMA1-257ENST00000639344 NBR1Q14596 966 aa11.88□□□□□ -0.51
KCNMA1-257ENST00000639344 FAM50AQ14320 339 aaKnown RBP11.87□□□□□ -0.51
KCNMA1-257ENST00000639344 TSHZ2Q9NRE2 1034 aa11.86□□□□□ -0.51
KCNMA1-257ENST00000639344 FKBP8Q14318 412 aa11.85□□□□□ -0.51
KCNMA1-257ENST00000639344 ANP32CO43423 234 aa11.81□□□□□ -0.52
KCNMA1-257ENST00000639344 PABPN1Q86U42 306 aaKnown RBP eCLIP11.79□□□□□ -0.52
KCNMA1-257ENST00000639344 CDK11AQ9UQ88 783 aaPredicted RBP11.77□□□□□ -0.53
KCNMA1-257ENST00000639344 DDX10Q13206 875 aaKnown RBP11.77□□□□□ -0.53
KCNMA1-257ENST00000639344 NCBP3Q53F19 620 aaKnown RBP11.76□□□□□ -0.53
KCNMA1-257ENST00000639344 TRIM52Q96A61 297 aa11.75□□□□□ -0.53
KCNMA1-257ENST00000639344 KLHL34Q8N239 644 aa11.75□□□□□ -0.53
KCNMA1-257ENST00000639344 SCRIBQ14160 1630 aa11.73□□□□□ -0.53
KCNMA1-257ENST00000639344 TIMELESSQ9UNS1 1208 aa11.71□□□□□ -0.53
KCNMA1-257ENST00000639344 RSF1Q96T23 1441 aaPredicted RBP11.71□□□□□ -0.54
KCNMA1-257ENST00000639344 HIRIP3Q9BW71 556 aaPredicted RBP11.7□□□□□ -0.54
KCNMA1-257ENST00000639344 SUPT16HQ9Y5B9 1047 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-257ENST00000639344 ZNF326Q5BKZ1 582 aaKnown RBP11.7□□□□□ -0.54
KCNMA1-257ENST00000639344 RBM19Q9Y4C8 960 aaKnown RBP11.69□□□□□ -0.54
KCNMA1-257ENST00000639344 P3H3Q8IVL6 736 aa11.67□□□□□ -0.54
KCNMA1-257ENST00000639344 IRX6P78412 446 aaPredicted RBP11.66□□□□□ -0.54
KCNMA1-257ENST00000639344 BCL11BQ9C0K0 894 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-257ENST00000639344 HAP1P54257 671 aaPredicted RBP11.65□□□□□ -0.54
KCNMA1-257ENST00000639344 ARXQ96QS3 562 aa11.65□□□□□ -0.54
KCNMA1-257ENST00000639344 ZMYND15Q9H091 742 aa11.65□□□□□ -0.54
KCNMA1-257ENST00000639344 CEP162Q5TB80 1403 aa11.65□□□□□ -0.55
KCNMA1-257ENST00000639344 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.55
KCNMA1-257ENST00000639344 NAP1L5Q96NT1 182 aaPredicted RBP11.64□□□□□ -0.55
KCNMA1-257ENST00000639344 TAF7LQ5H9L4 462 aa11.62□□□□□ -0.55
KCNMA1-257ENST00000639344 TULP1O00294 542 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-257ENST00000639344 RSPH6AQ9H0K4 717 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms