RNA–Protein interactions for RNA: ENST00000639040.1

AC118553.2-204, humanhuman

TSL 5

Gene AC118553.2, Length 2,568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC118553.2-204ENST00000639040 NISCHQ9Y2I1 1504 aa38.59■■■■□ 3.77
AC118553.2-204ENST00000639040 CCDC180Q9P1Z9 1646 aa33■■■□□ 2.87
AC118553.2-204ENST00000639040 ZCCHC6Q5VYS8 1495 aaKnown RBP32.61■■■□□ 2.81
AC118553.2-204ENST00000639040 SHROOM4Q9ULL8 1493 aa32.56■■■□□ 2.8
AC118553.2-204ENST00000639040 DCAF8L2P0C7V8 631 aa31.85■■■□□ 2.69
AC118553.2-204ENST00000639040 SUPT5HO00267 1087 aaKnown RBP31.82■■■□□ 2.68
AC118553.2-204ENST00000639040 DCAF1Q9Y4B6 1507 aa31.74■■■□□ 2.67
AC118553.2-204ENST00000639040 CHIC1Q5VXU3 224 aa30.92■■■□□ 2.54
AC118553.2-204ENST00000639040 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
AC118553.2-204ENST00000639040 SCRIBQ14160 1630 aa30.77■■■□□ 2.52
AC118553.2-204ENST00000639040 ABCC9O60706 1549 aa30.73■■■□□ 2.51
AC118553.2-204ENST00000639040 NACADO15069 1562 aa30.52■■■□□ 2.48
AC118553.2-204ENST00000639040 RSF1Q96T23 1441 aaPredicted RBP30.42■■■□□ 2.46
AC118553.2-204ENST00000639040 RB1CC1Q8TDY2 1594 aa30.08■■■□□ 2.41
AC118553.2-204ENST00000639040 CECR2Q9BXF3 1484 aa30.06■■■□□ 2.4
AC118553.2-204ENST00000639040 MROH2BQ7Z745 1585 aa29.96■■■□□ 2.39
AC118553.2-204ENST00000639040 LOC105371045A0A1W2PR82 267 aa29.93■■■□□ 2.38
AC118553.2-204ENST00000639040 WIZO95785 1651 aa29.8■■■□□ 2.36
AC118553.2-204ENST00000639040 TRIM41Q8WV44 630 aa29.71■■■□□ 2.35
AC118553.2-204ENST00000639040 BAZ1AQ9NRL2 1556 aaPredicted RBP29.66■■■□□ 2.34
AC118553.2-204ENST00000639040 PCGF6Q9BYE7 350 aa29.65■■■□□ 2.34
AC118553.2-204ENST00000639040 UNC13AQ9UPW8 1703 aa29.64■■■□□ 2.34
AC118553.2-204ENST00000639040 HRCP23327 699 aa29.55■■■□□ 2.32
AC118553.2-204ENST00000639040 SMARCA4P51532 1647 aa29.45■■■□□ 2.3
AC118553.2-204ENST00000639040 FAM9AQ8IZU1 332 aaPredicted RBP29.38■■■□□ 2.29
AC118553.2-204ENST00000639040 TOP2AP11388 1531 aaKnown RBP29.36■■■□□ 2.29
AC118553.2-204ENST00000639040 EIF4G1Q04637 1599 aaKnown RBP29.36■■■□□ 2.29
AC118553.2-204ENST00000639040 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
AC118553.2-204ENST00000639040 TRIM26Q12899 539 aaPredicted RBP29.21■■■□□ 2.27
AC118553.2-204ENST00000639040 CCDC88BA6NC98 1476 aa29.19■■■□□ 2.26
AC118553.2-204ENST00000639040 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
AC118553.2-204ENST00000639040 PABPN1Q86U42 306 aaKnown RBP eCLIP29.15■■■□□ 2.26
AC118553.2-204ENST00000639040 EHMT2Q96KQ7 1210 aa29.08■■■□□ 2.24
AC118553.2-204ENST00000639040 ABCC8Q09428 1581 aa29.01■■■□□ 2.23
AC118553.2-204ENST00000639040 PEG3Q9GZU2 1588 aa28.94■■■□□ 2.22
AC118553.2-204ENST00000639040 PPARGC1BQ86YN6 1023 aaKnown RBP28.91■■■□□ 2.22
AC118553.2-204ENST00000639040 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
AC118553.2-204ENST00000639040 SOGA1O94964 1423 aa28.68■■■□□ 2.18
AC118553.2-204ENST00000639040 BAZ1BQ9UIG0 1483 aaKnown RBP28.62■■■□□ 2.17
AC118553.2-204ENST00000639040 EEA1Q15075 1411 aa28.58■■■□□ 2.16
AC118553.2-204ENST00000639040 WRNQ14191 1432 aaPredicted RBP eCLIP28.57■■■□□ 2.16
AC118553.2-204ENST00000639040 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
AC118553.2-204ENST00000639040 CSRNP3Q8WYN3 585 aa28.5■■■□□ 2.15
AC118553.2-204ENST00000639040 ZEB1P37275 1124 aaPredicted RBP28.48■■■□□ 2.15
AC118553.2-204ENST00000639040 SYNJ1O43426 1573 aa28.46■■■□□ 2.15
AC118553.2-204ENST00000639040 TNIKQ9UKE5 1360 aa28.46■■■□□ 2.15
AC118553.2-204ENST00000639040 CEP162Q5TB80 1403 aa28.46■■■□□ 2.15
AC118553.2-204ENST00000639040 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
AC118553.2-204ENST00000639040 UBTFP17480 764 aaKnown RBP28.31■■■□□ 2.12
AC118553.2-204ENST00000639040 HMGXB3Q12766 1538 aa28.22■■■□□ 2.11
AC118553.2-204ENST00000639040 NCAPD3P42695 1498 aa28.22■■■□□ 2.11
AC118553.2-204ENST00000639040 KIF21BO75037 1637 aa28.22■■■□□ 2.11
AC118553.2-204ENST00000639040 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
AC118553.2-204ENST00000639040 TOP2BQ02880 1626 aa28.17■■■□□ 2.1
AC118553.2-204ENST00000639040 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
AC118553.2-204ENST00000639040 TTBK1Q5TCY1 1321 aaPredicted RBP28.09■■■□□ 2.09
AC118553.2-204ENST00000639040 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.04■■■□□ 2.08
AC118553.2-204ENST00000639040 RAPGEF2Q9Y4G8 1499 aa28.01■■■□□ 2.07
AC118553.2-204ENST00000639040 CLIP1P30622 1438 aa27.98■■■□□ 2.07
AC118553.2-204ENST00000639040 CCER1Q8TC90 406 aaPredicted RBP27.95■■■□□ 2.07
AC118553.2-204ENST00000639040 CFTRP13569 1480 aa27.92■■■□□ 2.06
AC118553.2-204ENST00000639040 CUX1P39880 1505 aa27.91■■■□□ 2.06
AC118553.2-204ENST00000639040 VPS8Q8N3P4 1428 aa27.85■■■□□ 2.05
AC118553.2-204ENST00000639040 PRXQ9BXM0 1461 aa27.81■■■□□ 2.04
AC118553.2-204ENST00000639040 ERICH3Q5RHP9 1530 aa27.81■■■□□ 2.04
AC118553.2-204ENST00000639040 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
AC118553.2-204ENST00000639040 RANGAP1P46060 587 aaPredicted RBP27.73■■■□□ 2.03
AC118553.2-204ENST00000639040 KIF27Q86VH2 1401 aa27.71■■■□□ 2.03
AC118553.2-204ENST00000639040 APLP2Q06481 763 aa27.64■■■□□ 2.02
AC118553.2-204ENST00000639040 CADPSQ9ULU8 1353 aa27.63■■■□□ 2.01
AC118553.2-204ENST00000639040 CC2D2AQ9P2K1 1620 aa27.61■■■□□ 2.01
AC118553.2-204ENST00000639040 ARAP1Q96P48 1450 aa27.59■■■□□ 2.01
AC118553.2-204ENST00000639040 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
AC118553.2-204ENST00000639040 CUX2O14529 1486 aa27.47■■□□□ 1.99
AC118553.2-204ENST00000639040 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
AC118553.2-204ENST00000639040 IGF1RP08069 1367 aa27.43■■□□□ 1.98
AC118553.2-204ENST00000639040 ARHGAP35Q9NRY4 1499 aa27.38■■□□□ 1.97
AC118553.2-204ENST00000639040 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
AC118553.2-204ENST00000639040 KANK4Q5T7N3 995 aaPredicted RBP27.35■■□□□ 1.97
AC118553.2-204ENST00000639040 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
AC118553.2-204ENST00000639040 DIEXFQ68CQ4 756 aaKnown RBP27.28■■□□□ 1.96
AC118553.2-204ENST00000639040 DNMBPQ6XZF7 1577 aa27.24■■□□□ 1.95
AC118553.2-204ENST00000639040 NESP48681 1621 aa27.21■■□□□ 1.95
AC118553.2-204ENST00000639040 RRBP1Q9P2E9 1410 aaKnown RBP27.18■■□□□ 1.94
AC118553.2-204ENST00000639040 ZNF316A6NFI3 1004 aaPredicted RBP27.18■■□□□ 1.94
AC118553.2-204ENST00000639040 TOPBP1Q92547 1522 aa27.18■■□□□ 1.94
AC118553.2-204ENST00000639040 RAD54L2Q9Y4B4 1467 aa27.16■■□□□ 1.94
AC118553.2-204ENST00000639040 ABCA10Q8WWZ4 1543 aa27.14■■□□□ 1.94
AC118553.2-204ENST00000639040 POLA1P09884 1462 aaPredicted RBP27.14■■□□□ 1.94
AC118553.2-204ENST00000639040 TIAM1Q13009 1591 aa27.07■■□□□ 1.92
AC118553.2-204ENST00000639040 MAP3K1Q13233 1512 aa27.06■■□□□ 1.92
AC118553.2-204ENST00000639040 LAMC3Q9Y6N6 1575 aa27.06■■□□□ 1.92
AC118553.2-204ENST00000639040 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
AC118553.2-204ENST00000639040 DHX57Q6P158 1386 aaKnown RBP27.04■■□□□ 1.92
AC118553.2-204ENST00000639040 SCAF1Q9H7N4 1312 aaKnown RBP27.03■■□□□ 1.92
AC118553.2-204ENST00000639040 CLSPNQ9HAW4 1339 aa27.01■■□□□ 1.91
AC118553.2-204ENST00000639040 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
AC118553.2-204ENST00000639040 CUL7Q14999 1698 aa26.99■■□□□ 1.91
AC118553.2-204ENST00000639040 FHAD1B1AJZ9 1412 aa26.97■■□□□ 1.91
AC118553.2-204ENST00000639040 WDR97A6NE52 1622 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms