RNA–Protein interactions for RNA: ENST00000639000.1

SPIN3-217, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,055 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-217ENST00000639000 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
SPIN3-217ENST00000639000 CCDC180Q9P1Z9 1646 aa28.67■■■□□ 2.18
SPIN3-217ENST00000639000 SHROOM4Q9ULL8 1493 aa28.58■■■□□ 2.17
SPIN3-217ENST00000639000 ZCCHC6Q5VYS8 1495 aaKnown RBP28.56■■■□□ 2.16
SPIN3-217ENST00000639000 SUPT5HO00267 1087 aaKnown RBP28.06■■■□□ 2.08
SPIN3-217ENST00000639000 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
SPIN3-217ENST00000639000 DCAF8L2P0C7V8 631 aa27.66■■■□□ 2.02
SPIN3-217ENST00000639000 CHIC1Q5VXU3 224 aa27.46■■□□□ 1.99
SPIN3-217ENST00000639000 MYO15BQ96JP2 1530 aa27.37■■□□□ 1.97
SPIN3-217ENST00000639000 ABCC9O60706 1549 aa27.03■■□□□ 1.92
SPIN3-217ENST00000639000 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
SPIN3-217ENST00000639000 HRCP23327 699 aa26.7■■□□□ 1.87
SPIN3-217ENST00000639000 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.87
SPIN3-217ENST00000639000 NACADO15069 1562 aa26.61■■□□□ 1.85
SPIN3-217ENST00000639000 LOC105371045A0A1W2PR82 267 aa26.56■■□□□ 1.84
SPIN3-217ENST00000639000 PCGF6Q9BYE7 350 aa26.54■■□□□ 1.84
SPIN3-217ENST00000639000 RB1CC1Q8TDY2 1594 aa26.42■■□□□ 1.82
SPIN3-217ENST00000639000 CECR2Q9BXF3 1484 aa26.26■■□□□ 1.79
SPIN3-217ENST00000639000 TRIM41Q8WV44 630 aa26.19■■□□□ 1.78
SPIN3-217ENST00000639000 MROH2BQ7Z745 1585 aa26.19■■□□□ 1.78
SPIN3-217ENST00000639000 TRIM26Q12899 539 aaPredicted RBP26.13■■□□□ 1.77
SPIN3-217ENST00000639000 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
SPIN3-217ENST00000639000 WIZO95785 1651 aa26.02■■□□□ 1.76
SPIN3-217ENST00000639000 BAZ1AQ9NRL2 1556 aaPredicted RBP25.92■■□□□ 1.74
SPIN3-217ENST00000639000 FAM9AQ8IZU1 332 aaPredicted RBP25.89■■□□□ 1.74
SPIN3-217ENST00000639000 UNC13AQ9UPW8 1703 aa25.82■■□□□ 1.72
SPIN3-217ENST00000639000 EIF4G1Q04637 1599 aaKnown RBP25.82■■□□□ 1.72
SPIN3-217ENST00000639000 TOP2AP11388 1531 aaKnown RBP25.68■■□□□ 1.7
SPIN3-217ENST00000639000 SMARCA4P51532 1647 aa25.65■■□□□ 1.7
SPIN3-217ENST00000639000 ZEB1P37275 1124 aaPredicted RBP25.6■■□□□ 1.69
SPIN3-217ENST00000639000 EHMT2Q96KQ7 1210 aa25.57■■□□□ 1.68
SPIN3-217ENST00000639000 BICRAQ9NZM4 1560 aa25.55■■□□□ 1.68
SPIN3-217ENST00000639000 CCDC88BA6NC98 1476 aa25.55■■□□□ 1.68
SPIN3-217ENST00000639000 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
SPIN3-217ENST00000639000 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
SPIN3-217ENST00000639000 ABCC8Q09428 1581 aa25.43■■□□□ 1.66
SPIN3-217ENST00000639000 WRNQ14191 1432 aaPredicted RBP eCLIP25.24■■□□□ 1.63
SPIN3-217ENST00000639000 PEG3Q9GZU2 1588 aa25.24■■□□□ 1.63
SPIN3-217ENST00000639000 SOGA1O94964 1423 aa25.23■■□□□ 1.63
SPIN3-217ENST00000639000 EEA1Q15075 1411 aa25.19■■□□□ 1.62
SPIN3-217ENST00000639000 TNIKQ9UKE5 1360 aa25.17■■□□□ 1.62
SPIN3-217ENST00000639000 CEP162Q5TB80 1403 aa25.15■■□□□ 1.62
SPIN3-217ENST00000639000 RUSC2Q8N2Y8 1516 aa25.11■■□□□ 1.61
SPIN3-217ENST00000639000 CSRNP3Q8WYN3 585 aa25.1■■□□□ 1.61
SPIN3-217ENST00000639000 ATAD2BQ9ULI0 1458 aa24.99■■□□□ 1.59
SPIN3-217ENST00000639000 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.99■■□□□ 1.59
SPIN3-217ENST00000639000 GOLGA3Q08378 1498 aa24.97■■□□□ 1.59
SPIN3-217ENST00000639000 SYNJ1O43426 1573 aa24.93■■□□□ 1.58
SPIN3-217ENST00000639000 CCER1Q8TC90 406 aaPredicted RBP24.92■■□□□ 1.58
SPIN3-217ENST00000639000 UBTFP17480 764 aaKnown RBP24.9■■□□□ 1.58
SPIN3-217ENST00000639000 BAZ1BQ9UIG0 1483 aaKnown RBP24.87■■□□□ 1.57
SPIN3-217ENST00000639000 KIF21BO75037 1637 aa24.84■■□□□ 1.57
SPIN3-217ENST00000639000 CEP164Q9UPV0 1460 aa24.84■■□□□ 1.57
SPIN3-217ENST00000639000 TTBK1Q5TCY1 1321 aaPredicted RBP24.78■■□□□ 1.56
SPIN3-217ENST00000639000 CLIP1P30622 1438 aa24.67■■□□□ 1.54
SPIN3-217ENST00000639000 TOP2BQ02880 1626 aa24.65■■□□□ 1.54
SPIN3-217ENST00000639000 RAPGEF2Q9Y4G8 1499 aa24.63■■□□□ 1.53
SPIN3-217ENST00000639000 VPS8Q8N3P4 1428 aa24.6■■□□□ 1.53
SPIN3-217ENST00000639000 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
SPIN3-217ENST00000639000 BIVM-ERCC5R4GMW8 1640 aa24.57■■□□□ 1.52
SPIN3-217ENST00000639000 NCAPD3P42695 1498 aa24.56■■□□□ 1.52
SPIN3-217ENST00000639000 HMGXB3Q12766 1538 aa24.52■■□□□ 1.52
SPIN3-217ENST00000639000 DIEXFQ68CQ4 756 aaKnown RBP24.49■■□□□ 1.51
SPIN3-217ENST00000639000 CC2D2AQ9P2K1 1620 aa24.48■■□□□ 1.51
SPIN3-217ENST00000639000 PRXQ9BXM0 1461 aa24.45■■□□□ 1.5
SPIN3-217ENST00000639000 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
SPIN3-217ENST00000639000 CUX1P39880 1505 aa24.39■■□□□ 1.49
SPIN3-217ENST00000639000 ACIN1Q9UKV3 1341 aaKnown RBP24.38■■□□□ 1.49
SPIN3-217ENST00000639000 HNRNPUL2Q1KMD3 747 aaKnown RBP24.38■■□□□ 1.49
SPIN3-217ENST00000639000 ZNF316A6NFI3 1004 aaPredicted RBP24.35■■□□□ 1.49
SPIN3-217ENST00000639000 APLP2Q06481 763 aa24.34■■□□□ 1.49
SPIN3-217ENST00000639000 CFTRP13569 1480 aa24.33■■□□□ 1.48
SPIN3-217ENST00000639000 ARAP1Q96P48 1450 aa24.32■■□□□ 1.48
SPIN3-217ENST00000639000 NEUROD1Q13562 356 aa24.31■■□□□ 1.48
SPIN3-217ENST00000639000 RANGAP1P46060 587 aaPredicted RBP24.28■■□□□ 1.48
SPIN3-217ENST00000639000 KIF27Q86VH2 1401 aa24.26■■□□□ 1.47
SPIN3-217ENST00000639000 CENPBP07199 599 aaPredicted RBP24.17■■□□□ 1.46
SPIN3-217ENST00000639000 PELP1Q8IZL8 1130 aaKnown RBP24.15■■□□□ 1.46
SPIN3-217ENST00000639000 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
SPIN3-217ENST00000639000 PRDM2Q13029 1718 aa24.11■■□□□ 1.45
SPIN3-217ENST00000639000 ARHGAP35Q9NRY4 1499 aa24.09■■□□□ 1.45
SPIN3-217ENST00000639000 RRBP1Q9P2E9 1410 aaKnown RBP24.08■■□□□ 1.45
SPIN3-217ENST00000639000 CLSPNQ9HAW4 1339 aa24.07■■□□□ 1.44
SPIN3-217ENST00000639000 DHX57Q6P158 1386 aaKnown RBP24.05■■□□□ 1.44
SPIN3-217ENST00000639000 IGF1RP08069 1367 aa24.03■■□□□ 1.44
SPIN3-217ENST00000639000 GTF3C3Q9Y5Q9 886 aa24.03■■□□□ 1.44
SPIN3-217ENST00000639000 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
SPIN3-217ENST00000639000 CUX2O14529 1486 aa23.99■■□□□ 1.43
SPIN3-217ENST00000639000 MIER1Q8N108 512 aa23.98■■□□□ 1.43
SPIN3-217ENST00000639000 DNAJC5BQ9UF47 199 aa23.93■■□□□ 1.42
SPIN3-217ENST00000639000 CCNB3Q8WWL7 1395 aa23.91■■□□□ 1.42
SPIN3-217ENST00000639000 FGD5Q6ZNL6 1462 aa23.91■■□□□ 1.42
SPIN3-217ENST00000639000 CARMIL1Q5VZK9 1371 aa23.89■■□□□ 1.42
SPIN3-217ENST00000639000 MAP3K1Q13233 1512 aa23.89■■□□□ 1.41
SPIN3-217ENST00000639000 TIAM1Q13009 1591 aa23.83■■□□□ 1.41
SPIN3-217ENST00000639000 YTHDC1Q96MU7 727 aaKnown RBP23.8■■□□□ 1.4
SPIN3-217ENST00000639000 FANCD2Q9BXW9 1451 aa23.75■■□□□ 1.39
SPIN3-217ENST00000639000 LRRC9Q6ZRR7 1453 aa23.74■■□□□ 1.39
SPIN3-217ENST00000639000 LAMC3Q9Y6N6 1575 aa23.74■■□□□ 1.39
SPIN3-217ENST00000639000 DNMBPQ6XZF7 1577 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms