RNA–Protein interactions for RNA: ENST00000638819.1

SPIN3-212, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,121 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-212ENST00000638819 NISCHQ9Y2I1 1504 aa26.18■■□□□ 1.78
SPIN3-212ENST00000638819 CCDC180Q9P1Z9 1646 aa22.3■■□□□ 1.16
SPIN3-212ENST00000638819 SHROOM4Q9ULL8 1493 aa22.2■■□□□ 1.15
SPIN3-212ENST00000638819 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
SPIN3-212ENST00000638819 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
SPIN3-212ENST00000638819 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
SPIN3-212ENST00000638819 DCAF1Q9Y4B6 1507 aa21.47■■□□□ 1.03
SPIN3-212ENST00000638819 CHIC1Q5VXU3 224 aa21.05■□□□□ 0.96
SPIN3-212ENST00000638819 MYO15BQ96JP2 1530 aa20.91■□□□□ 0.94
SPIN3-212ENST00000638819 SCRIBQ14160 1630 aa20.89■□□□□ 0.93
SPIN3-212ENST00000638819 ABCC9O60706 1549 aa20.81■□□□□ 0.92
SPIN3-212ENST00000638819 NACADO15069 1562 aa20.67■□□□□ 0.9
SPIN3-212ENST00000638819 RSF1Q96T23 1441 aaPredicted RBP20.67■□□□□ 0.9
SPIN3-212ENST00000638819 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
SPIN3-212ENST00000638819 CECR2Q9BXF3 1484 aa20.45■□□□□ 0.86
SPIN3-212ENST00000638819 LOC105371045A0A1W2PR82 267 aa20.44■□□□□ 0.86
SPIN3-212ENST00000638819 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
SPIN3-212ENST00000638819 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
SPIN3-212ENST00000638819 TRIM41Q8WV44 630 aa20.24■□□□□ 0.83
SPIN3-212ENST00000638819 WIZO95785 1651 aa20.23■□□□□ 0.83
SPIN3-212ENST00000638819 PCGF6Q9BYE7 350 aa20.22■□□□□ 0.83
SPIN3-212ENST00000638819 BAZ1AQ9NRL2 1556 aaPredicted RBP20.1■□□□□ 0.81
SPIN3-212ENST00000638819 HRCP23327 699 aa20.1■□□□□ 0.81
SPIN3-212ENST00000638819 FAM9AQ8IZU1 332 aaPredicted RBP20.07■□□□□ 0.8
SPIN3-212ENST00000638819 UNC13AQ9UPW8 1703 aa20.07■□□□□ 0.8
SPIN3-212ENST00000638819 SMARCA4P51532 1647 aa19.96■□□□□ 0.79
SPIN3-212ENST00000638819 MYT1Q01538 1121 aa19.93■□□□□ 0.78
SPIN3-212ENST00000638819 PABPN1Q86U42 306 aaKnown RBP eCLIP19.91■□□□□ 0.78
SPIN3-212ENST00000638819 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
SPIN3-212ENST00000638819 TOP2AP11388 1531 aaKnown RBP19.89■□□□□ 0.77
SPIN3-212ENST00000638819 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
SPIN3-212ENST00000638819 EIF4G1Q04637 1599 aaKnown RBP19.87■□□□□ 0.77
SPIN3-212ENST00000638819 CCDC88BA6NC98 1476 aa19.84■□□□□ 0.77
SPIN3-212ENST00000638819 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
SPIN3-212ENST00000638819 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
SPIN3-212ENST00000638819 PPARGC1BQ86YN6 1023 aaKnown RBP19.74■□□□□ 0.75
SPIN3-212ENST00000638819 ABCC8Q09428 1581 aa19.72■□□□□ 0.75
SPIN3-212ENST00000638819 PEG3Q9GZU2 1588 aa19.58■□□□□ 0.73
SPIN3-212ENST00000638819 SOGA1O94964 1423 aa19.52■□□□□ 0.72
SPIN3-212ENST00000638819 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
SPIN3-212ENST00000638819 RUSC2Q8N2Y8 1516 aa19.44■□□□□ 0.7
SPIN3-212ENST00000638819 BAZ1BQ9UIG0 1483 aaKnown RBP19.42■□□□□ 0.7
SPIN3-212ENST00000638819 CSRNP3Q8WYN3 585 aa19.4■□□□□ 0.7
SPIN3-212ENST00000638819 WRNQ14191 1432 aaPredicted RBP eCLIP19.4■□□□□ 0.7
SPIN3-212ENST00000638819 EEA1Q15075 1411 aa19.35■□□□□ 0.69
SPIN3-212ENST00000638819 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
SPIN3-212ENST00000638819 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
SPIN3-212ENST00000638819 CEP162Q5TB80 1403 aa19.33■□□□□ 0.68
SPIN3-212ENST00000638819 TNIKQ9UKE5 1360 aa19.33■□□□□ 0.68
SPIN3-212ENST00000638819 SYNJ1O43426 1573 aa19.31■□□□□ 0.68
SPIN3-212ENST00000638819 UBTFP17480 764 aaKnown RBP19.3■□□□□ 0.68
SPIN3-212ENST00000638819 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
SPIN3-212ENST00000638819 TTBK1Q5TCY1 1321 aaPredicted RBP19.21■□□□□ 0.67
SPIN3-212ENST00000638819 NCAPD3P42695 1498 aa19.15■□□□□ 0.66
SPIN3-212ENST00000638819 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
SPIN3-212ENST00000638819 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.13■□□□□ 0.65
SPIN3-212ENST00000638819 HMGXB3Q12766 1538 aa19.1■□□□□ 0.65
SPIN3-212ENST00000638819 KIF21BO75037 1637 aa19.1■□□□□ 0.65
SPIN3-212ENST00000638819 TOP2BQ02880 1626 aa19.09■□□□□ 0.65
SPIN3-212ENST00000638819 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
SPIN3-212ENST00000638819 RAPGEF2Q9Y4G8 1499 aa19.04■□□□□ 0.64
SPIN3-212ENST00000638819 BIVM-ERCC5R4GMW8 1640 aa19.01■□□□□ 0.63
SPIN3-212ENST00000638819 CLIP1P30622 1438 aa19■□□□□ 0.63
SPIN3-212ENST00000638819 RANGAP1P46060 587 aaPredicted RBP18.97■□□□□ 0.63
SPIN3-212ENST00000638819 CFTRP13569 1480 aa18.95■□□□□ 0.62
SPIN3-212ENST00000638819 CUX1P39880 1505 aa18.95■□□□□ 0.62
SPIN3-212ENST00000638819 VPS8Q8N3P4 1428 aa18.9■□□□□ 0.62
SPIN3-212ENST00000638819 PRXQ9BXM0 1461 aa18.87■□□□□ 0.61
SPIN3-212ENST00000638819 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
SPIN3-212ENST00000638819 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
SPIN3-212ENST00000638819 APLP2Q06481 763 aa18.81■□□□□ 0.6
SPIN3-212ENST00000638819 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
SPIN3-212ENST00000638819 HNRNPUL2Q1KMD3 747 aaKnown RBP18.78■□□□□ 0.6
SPIN3-212ENST00000638819 PRDM2Q13029 1718 aa18.75■□□□□ 0.59
SPIN3-212ENST00000638819 CC2D2AQ9P2K1 1620 aa18.74■□□□□ 0.59
SPIN3-212ENST00000638819 ARAP1Q96P48 1450 aa18.73■□□□□ 0.59
SPIN3-212ENST00000638819 CUX2O14529 1486 aa18.67■□□□□ 0.58
SPIN3-212ENST00000638819 IGF1RP08069 1367 aa18.66■□□□□ 0.58
SPIN3-212ENST00000638819 KANK4Q5T7N3 995 aaPredicted RBP18.65■□□□□ 0.58
SPIN3-212ENST00000638819 ACIN1Q9UKV3 1341 aaKnown RBP18.63■□□□□ 0.57
SPIN3-212ENST00000638819 FGD5Q6ZNL6 1462 aa18.63■□□□□ 0.57
SPIN3-212ENST00000638819 ARHGAP35Q9NRY4 1499 aa18.6■□□□□ 0.57
SPIN3-212ENST00000638819 FANCD2Q9BXW9 1451 aa18.58■□□□□ 0.57
SPIN3-212ENST00000638819 DIEXFQ68CQ4 756 aaKnown RBP18.58■□□□□ 0.56
SPIN3-212ENST00000638819 CARMIL1Q5VZK9 1371 aa18.56■□□□□ 0.56
SPIN3-212ENST00000638819 BCL11AQ9H165 835 aa18.55■□□□□ 0.56
SPIN3-212ENST00000638819 NEUROD1Q13562 356 aa18.54■□□□□ 0.56
SPIN3-212ENST00000638819 GTF3C3Q9Y5Q9 886 aa18.53■□□□□ 0.56
SPIN3-212ENST00000638819 NESP48681 1621 aa18.52■□□□□ 0.56
SPIN3-212ENST00000638819 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
SPIN3-212ENST00000638819 RAD54L2Q9Y4B4 1467 aa18.48■□□□□ 0.55
SPIN3-212ENST00000638819 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
SPIN3-212ENST00000638819 TOPBP1Q92547 1522 aa18.44■□□□□ 0.54
SPIN3-212ENST00000638819 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
SPIN3-212ENST00000638819 POLA1P09884 1462 aaPredicted RBP18.43■□□□□ 0.54
SPIN3-212ENST00000638819 PRKCSHP14314 528 aaPredicted RBP18.43■□□□□ 0.54
SPIN3-212ENST00000638819 ABCA10Q8WWZ4 1543 aa18.41■□□□□ 0.54
SPIN3-212ENST00000638819 CENPBP07199 599 aaPredicted RBP18.4■□□□□ 0.54
SPIN3-212ENST00000638819 P3H3Q8IVL6 736 aa18.39■□□□□ 0.53
SPIN3-212ENST00000638819 DHX57Q6P158 1386 aaKnown RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms