RNA–Protein interactions for RNA: ENST00000638606.1

KCNMA1-241, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-241ENST00000638606 NISCHQ9Y2I1 1504 aa23.94■■□□□ 1.42
KCNMA1-241ENST00000638606 DCAF8L2P0C7V8 631 aa22.99■■□□□ 1.27
KCNMA1-241ENST00000638606 SHROOM4Q9ULL8 1493 aa22.62■■□□□ 1.21
KCNMA1-241ENST00000638606 SUPT5HO00267 1087 aaKnown RBP22.59■■□□□ 1.21
KCNMA1-241ENST00000638606 EHMT2Q96KQ7 1210 aa21.68■■□□□ 1.06
KCNMA1-241ENST00000638606 PCGF6Q9BYE7 350 aa21.3■■□□□ 1
KCNMA1-241ENST00000638606 FAM9AQ8IZU1 332 aaPredicted RBP21.21■□□□□ 0.99
KCNMA1-241ENST00000638606 LOC105371045A0A1W2PR82 267 aa20.89■□□□□ 0.93
KCNMA1-241ENST00000638606 TTBK1Q5TCY1 1321 aaPredicted RBP20.88■□□□□ 0.93
KCNMA1-241ENST00000638606 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
KCNMA1-241ENST00000638606 PPARGC1BQ86YN6 1023 aaKnown RBP20.72■□□□□ 0.91
KCNMA1-241ENST00000638606 TRIM41Q8WV44 630 aa20.65■□□□□ 0.9
KCNMA1-241ENST00000638606 HRCP23327 699 aa20.5■□□□□ 0.87
KCNMA1-241ENST00000638606 RANGAP1P46060 587 aaPredicted RBP20.42■□□□□ 0.86
KCNMA1-241ENST00000638606 TRIM26Q12899 539 aaPredicted RBP20.21■□□□□ 0.83
KCNMA1-241ENST00000638606 CCER1Q8TC90 406 aaPredicted RBP20.17■□□□□ 0.82
KCNMA1-241ENST00000638606 UBTFP17480 764 aaKnown RBP20.08■□□□□ 0.81
KCNMA1-241ENST00000638606 MYO15BQ96JP2 1530 aa20.05■□□□□ 0.8
KCNMA1-241ENST00000638606 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
KCNMA1-241ENST00000638606 APLP2Q06481 763 aa19.95■□□□□ 0.78
KCNMA1-241ENST00000638606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.94■□□□□ 0.78
KCNMA1-241ENST00000638606 ABCC9O60706 1549 aa19.94■□□□□ 0.78
KCNMA1-241ENST00000638606 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.78
KCNMA1-241ENST00000638606 YTHDC1Q96MU7 727 aaKnown RBP19.85■□□□□ 0.77
KCNMA1-241ENST00000638606 PABPN1Q86U42 306 aaKnown RBP eCLIP19.78■□□□□ 0.76
KCNMA1-241ENST00000638606 HNRNPUL2Q1KMD3 747 aaKnown RBP19.72■□□□□ 0.75
KCNMA1-241ENST00000638606 ATP1B4Q9UN42 357 aaPredicted RBP19.67■□□□□ 0.74
KCNMA1-241ENST00000638606 SCRIBQ14160 1630 aa19.58■□□□□ 0.73
KCNMA1-241ENST00000638606 ITGAEP38570 1179 aa19.58■□□□□ 0.72
KCNMA1-241ENST00000638606 CENPBP07199 599 aaPredicted RBP19.52■□□□□ 0.72
KCNMA1-241ENST00000638606 DIEXFQ68CQ4 756 aaKnown RBP19.41■□□□□ 0.7
KCNMA1-241ENST00000638606 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.7
KCNMA1-241ENST00000638606 DCAF1Q9Y4B6 1507 aa19.33■□□□□ 0.69
KCNMA1-241ENST00000638606 RSF1Q96T23 1441 aaPredicted RBP19.33■□□□□ 0.69
KCNMA1-241ENST00000638606 CSRNP3Q8WYN3 585 aa19.21■□□□□ 0.67
KCNMA1-241ENST00000638606 GTF3C3Q9Y5Q9 886 aa19.2■□□□□ 0.66
KCNMA1-241ENST00000638606 CECR2Q9BXF3 1484 aa19.14■□□□□ 0.66
KCNMA1-241ENST00000638606 SCAF1Q9H7N4 1312 aaKnown RBP19.06■□□□□ 0.64
KCNMA1-241ENST00000638606 NEUROD1Q13562 356 aa19.03■□□□□ 0.64
KCNMA1-241ENST00000638606 CNGB1Q14028 1251 aaPredicted RBP19.03■□□□□ 0.64
KCNMA1-241ENST00000638606 P3H3Q8IVL6 736 aa19■□□□□ 0.63
KCNMA1-241ENST00000638606 PELP1Q8IZL8 1130 aaKnown RBP19■□□□□ 0.63
KCNMA1-241ENST00000638606 ACIN1Q9UKV3 1341 aaKnown RBP18.98■□□□□ 0.63
KCNMA1-241ENST00000638606 ZNF316A6NFI3 1004 aaPredicted RBP18.98■□□□□ 0.63
KCNMA1-241ENST00000638606 RB1CC1Q8TDY2 1594 aa18.96■□□□□ 0.63
KCNMA1-241ENST00000638606 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
KCNMA1-241ENST00000638606 BCANQ96GW7 911 aa18.84■□□□□ 0.61
KCNMA1-241ENST00000638606 MROH2BQ7Z745 1585 aa18.83■□□□□ 0.61
KCNMA1-241ENST00000638606 ARID3CA6NKF2 412 aa18.8■□□□□ 0.6
KCNMA1-241ENST00000638606 MIER1Q8N108 512 aa18.79■□□□□ 0.6
KCNMA1-241ENST00000638606 POLR3GLQ9BT43 218 aa18.79■□□□□ 0.6
KCNMA1-241ENST00000638606 SOGA1O94964 1423 aa18.79■□□□□ 0.6
KCNMA1-241ENST00000638606 CEP162Q5TB80 1403 aa18.77■□□□□ 0.59
KCNMA1-241ENST00000638606 ABCC8Q09428 1581 aa18.71■□□□□ 0.59
KCNMA1-241ENST00000638606 NEFLP07196 543 aa18.71■□□□□ 0.58
KCNMA1-241ENST00000638606 HIRIP3Q9BW71 556 aaPredicted RBP18.7■□□□□ 0.58
KCNMA1-241ENST00000638606 CCDC88BA6NC98 1476 aa18.67■□□□□ 0.58
KCNMA1-241ENST00000638606 WIZO95785 1651 aa18.63■□□□□ 0.57
KCNMA1-241ENST00000638606 CLIP1P30622 1438 aa18.61■□□□□ 0.57
KCNMA1-241ENST00000638606 TRIM52Q96A61 297 aa18.58■□□□□ 0.56
KCNMA1-241ENST00000638606 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
KCNMA1-241ENST00000638606 NACADO15069 1562 aa18.55■□□□□ 0.56
KCNMA1-241ENST00000638606 DDX10Q13206 875 aaKnown RBP18.55■□□□□ 0.56
KCNMA1-241ENST00000638606 RUSC2Q8N2Y8 1516 aa18.52■□□□□ 0.56
KCNMA1-241ENST00000638606 TNIKQ9UKE5 1360 aa18.51■□□□□ 0.55
KCNMA1-241ENST00000638606 ERICH6Q7L0X2 663 aa18.48■□□□□ 0.55
KCNMA1-241ENST00000638606 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
KCNMA1-241ENST00000638606 ZNF326Q5BKZ1 582 aaKnown RBP18.45■□□□□ 0.54
KCNMA1-241ENST00000638606 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
KCNMA1-241ENST00000638606 KANK4Q5T7N3 995 aaPredicted RBP18.42■□□□□ 0.54
KCNMA1-241ENST00000638606 CHIC2Q9UKJ5 165 aa18.42■□□□□ 0.54
KCNMA1-241ENST00000638606 FBLN2P98095 1184 aa18.4■□□□□ 0.54
KCNMA1-241ENST00000638606 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
KCNMA1-241ENST00000638606 ANP32CO43423 234 aa18.36■□□□□ 0.53
KCNMA1-241ENST00000638606 FKBP8Q14318 412 aa18.34■□□□□ 0.53
KCNMA1-241ENST00000638606 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
KCNMA1-241ENST00000638606 BAZ1BQ9UIG0 1483 aaKnown RBP18.32■□□□□ 0.52
KCNMA1-241ENST00000638606 EEA1Q15075 1411 aa18.28■□□□□ 0.52
KCNMA1-241ENST00000638606 CEP164Q9UPV0 1460 aa18.27■□□□□ 0.51
KCNMA1-241ENST00000638606 ZNF777Q9ULD5 760 aaPredicted RBP18.26■□□□□ 0.51
KCNMA1-241ENST00000638606 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
KCNMA1-241ENST00000638606 MYT1LQ9UL68 1186 aa18.22■□□□□ 0.51
KCNMA1-241ENST00000638606 RRP7BPQ9NSQ0 103 aa18.22■□□□□ 0.51
KCNMA1-241ENST00000638606 HNRNPUQ00839 825 aaKnown RBP eCLIP18.17■□□□□ 0.5
KCNMA1-241ENST00000638606 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
KCNMA1-241ENST00000638606 RAPGEF2Q9Y4G8 1499 aa18.16■□□□□ 0.5
KCNMA1-241ENST00000638606 FAM9BQ8IZU0 186 aa18.15■□□□□ 0.5
KCNMA1-241ENST00000638606 KCNH8Q96L42 1107 aa18.15■□□□□ 0.5
KCNMA1-241ENST00000638606 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
KCNMA1-241ENST00000638606 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
KCNMA1-241ENST00000638606 KIF27Q86VH2 1401 aa18.1■□□□□ 0.49
KCNMA1-241ENST00000638606 SALL2Q9Y467 1007 aaPredicted RBP18.08■□□□□ 0.48
KCNMA1-241ENST00000638606 MTUS2Q5JR59 1369 aa18.08■□□□□ 0.48
KCNMA1-241ENST00000638606 MYT1Q01538 1121 aa18.06■□□□□ 0.48
KCNMA1-241ENST00000638606 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
KCNMA1-241ENST00000638606 SMARCA4P51532 1647 aa18.04■□□□□ 0.48
KCNMA1-241ENST00000638606 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
KCNMA1-241ENST00000638606 CUX2O14529 1486 aa18.01■□□□□ 0.47
KCNMA1-241ENST00000638606 SMARCA2P51531 1590 aa18■□□□□ 0.47
KCNMA1-241ENST00000638606 CARMIL1Q5VZK9 1371 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms