RNA–Protein interactions for RNA: ENST00000637744.1

AC011139.1-202, humanhuman

TSL 5 BASIC

Gene AC011139.1, Length 563 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011139.1-202ENST00000637744 AEBP2Q6ZN18 517 aaPredicted RBP24.29■■□□□ 1.48
AC011139.1-202ENST00000637744 CHIC1Q5VXU3 224 aa23.62■■□□□ 1.37
AC011139.1-202ENST00000637744 SENP3Q9H4L4 574 aaPredicted RBP20.74■□□□□ 0.91
AC011139.1-202ENST00000637744 PHF23Q9BUL5 403 aaPredicted RBP20.72■□□□□ 0.91
AC011139.1-202ENST00000637744 FOXD1Q16676 465 aa19.21■□□□□ 0.67
AC011139.1-202ENST00000637744 PLPPR3Q6T4P5 718 aa19.15■□□□□ 0.66
AC011139.1-202ENST00000637744 ADRA2BP18089 450 aa18.33■□□□□ 0.52
AC011139.1-202ENST00000637744 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.52
AC011139.1-202ENST00000637744 PIAS4Q8N2W9 510 aaPredicted RBP18.11■□□□□ 0.49
AC011139.1-202ENST00000637744 MSH5O43196 834 aa17.85■□□□□ 0.45
AC011139.1-202ENST00000637744 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
AC011139.1-202ENST00000637744 PPP4R3CPQ6ZMV5 832 aa16.84■□□□□ 0.29
AC011139.1-202ENST00000637744 MAPK8IP2Q13387 824 aaPredicted RBP16.67■□□□□ 0.26
AC011139.1-202ENST00000637744 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
AC011139.1-202ENST00000637744 POTEDQ86YR6 584 aa16.49■□□□□ 0.23
AC011139.1-202ENST00000637744 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
AC011139.1-202ENST00000637744 NCBP3Q53F19 620 aaKnown RBP16.41■□□□□ 0.22
AC011139.1-202ENST00000637744 KCNA4P22459 653 aa16.21■□□□□ 0.19
AC011139.1-202ENST00000637744 RNF216Q9NWF9 866 aaPredicted RBP16.13■□□□□ 0.17
AC011139.1-202ENST00000637744 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
AC011139.1-202ENST00000637744 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
AC011139.1-202ENST00000637744 DCAF8L1A6NGE4 600 aa15.84■□□□□ 0.13
AC011139.1-202ENST00000637744 DNAJC5BQ9UF47 199 aa15.64■□□□□ 0.09
AC011139.1-202ENST00000637744 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
AC011139.1-202ENST00000637744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.39■□□□□ 0.05
AC011139.1-202ENST00000637744 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
AC011139.1-202ENST00000637744 SLC4A2P04920 1241 aa15.2■□□□□ 0.02
AC011139.1-202ENST00000637744 C1QBPQ07021 282 aaKnown RBP15.09■□□□□ 0.01
AC011139.1-202ENST00000637744 U3KPZ7 1027 aaPredicted RBP15.05■□□□□ -0
AC011139.1-202ENST00000637744 CACNB1Q02641 598 aaPredicted RBP15.01□□□□□ -0.01
AC011139.1-202ENST00000637744 FOXD4L1Q9NU39 408 aa15.01□□□□□ -0.01
AC011139.1-202ENST00000637744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.91□□□□□ -0.02
AC011139.1-202ENST00000637744 HNRNPUL2Q1KMD3 747 aaKnown RBP14.91□□□□□ -0.02
AC011139.1-202ENST00000637744 MYCNP04198 464 aaPredicted RBP14.9□□□□□ -0.02
AC011139.1-202ENST00000637744 ZBTB22O15209 634 aa14.87□□□□□ -0.03
AC011139.1-202ENST00000637744 SAMD1Q6SPF0 538 aaPredicted RBP14.82□□□□□ -0.04
AC011139.1-202ENST00000637744 APLP2Q06481 763 aa14.81□□□□□ -0.04
AC011139.1-202ENST00000637744 EHMT2Q96KQ7 1210 aa14.81□□□□□ -0.04
AC011139.1-202ENST00000637744 CAPN15O75808 1086 aa14.69□□□□□ -0.06
AC011139.1-202ENST00000637744 CSRNP3Q8WYN3 585 aa14.69□□□□□ -0.06
AC011139.1-202ENST00000637744 SPINK5Q9NQ38 1064 aaPredicted RBP14.68□□□□□ -0.06
AC011139.1-202ENST00000637744 ZNF219Q9P2Y4 722 aaPredicted RBP14.58□□□□□ -0.08
AC011139.1-202ENST00000637744 TRHP20396 242 aaPredicted RBP14.57□□□□□ -0.08
AC011139.1-202ENST00000637744 ATXN8OSP0DMR3 200 aa14.53□□□□□ -0.08
AC011139.1-202ENST00000637744 DSG3P32926 999 aa14.44□□□□□ -0.1
AC011139.1-202ENST00000637744 ATF5Q9Y2D1 282 aaPredicted RBP14.44□□□□□ -0.1
AC011139.1-202ENST00000637744 ABCB7O75027 752 aa14.35□□□□□ -0.11
AC011139.1-202ENST00000637744 POLA2Q14181 598 aa14.29□□□□□ -0.12
AC011139.1-202ENST00000637744 ZBTB12Q9Y330 459 aaPredicted RBP14.09□□□□□ -0.15
AC011139.1-202ENST00000637744 FBLN2P98095 1184 aa13.96□□□□□ -0.17
AC011139.1-202ENST00000637744 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
AC011139.1-202ENST00000637744 MKRN4PQ13434 485 aaPredicted RBP13.81□□□□□ -0.2
AC011139.1-202ENST00000637744 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
AC011139.1-202ENST00000637744 SPDYE2BA6NHP3 402 aa13.66□□□□□ -0.22
AC011139.1-202ENST00000637744 SPDYE6P0CI01 402 aa13.66□□□□□ -0.22
AC011139.1-202ENST00000637744 SPDYE2Q495Y8 402 aa13.66□□□□□ -0.22
AC011139.1-202ENST00000637744 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
AC011139.1-202ENST00000637744 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
AC011139.1-202ENST00000637744 SPDYE4A6NLX3 237 aa13.49□□□□□ -0.25
AC011139.1-202ENST00000637744 SSUH2Q9Y2M2 353 aa13.49□□□□□ -0.25
AC011139.1-202ENST00000637744 REM2Q8IYK8 340 aaPredicted RBP13.44□□□□□ -0.26
AC011139.1-202ENST00000637744 PABPN1Q86U42 306 aaKnown RBP eCLIP13.38□□□□□ -0.27
AC011139.1-202ENST00000637744 FKBP8Q14318 412 aa13.33□□□□□ -0.28
AC011139.1-202ENST00000637744 SPDYE1Q8NFV5 336 aaPredicted RBP13.31□□□□□ -0.28
AC011139.1-202ENST00000637744 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
AC011139.1-202ENST00000637744 PITPNM1O00562 1244 aa13.27□□□□□ -0.29
AC011139.1-202ENST00000637744 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
AC011139.1-202ENST00000637744 PROM2Q8N271 834 aa13.19□□□□□ -0.3
AC011139.1-202ENST00000637744 STAG3Q9UJ98 1225 aa13.19□□□□□ -0.3
AC011139.1-202ENST00000637744 PRR29P0C7W0 189 aa13.13□□□□□ -0.31
AC011139.1-202ENST00000637744 FXR2P51116 673 aaKnown RBP eCLIP13.07□□□□□ -0.32
AC011139.1-202ENST00000637744 PIP4P2Q8N4L2 257 aa13.06□□□□□ -0.32
AC011139.1-202ENST00000637744 POTEHQ6S545 545 aa13.05□□□□□ -0.32
AC011139.1-202ENST00000637744 PRKAR2AP13861 404 aaKnown RBP12.97□□□□□ -0.33
AC011139.1-202ENST00000637744 FBXO3Q9UK99 471 aa12.97□□□□□ -0.33
AC011139.1-202ENST00000637744 CHADLQ6NUI6 762 aa12.91□□□□□ -0.34
AC011139.1-202ENST00000637744 CREBZFQ9NS37 354 aa12.86□□□□□ -0.35
AC011139.1-202ENST00000637744 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
AC011139.1-202ENST00000637744 MIER1Q8N108 512 aa12.85□□□□□ -0.35
AC011139.1-202ENST00000637744 PLCD3Q8N3E9 789 aa12.81□□□□□ -0.36
AC011139.1-202ENST00000637744 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
AC011139.1-202ENST00000637744 HAX1O00165 279 aa12.73□□□□□ -0.37
AC011139.1-202ENST00000637744 NPM1P06748 294 aaKnown RBP eCLIP12.73□□□□□ -0.37
AC011139.1-202ENST00000637744 VASPP50552 380 aaPredicted RBP12.73□□□□□ -0.37
AC011139.1-202ENST00000637744 ZBTB47Q9UFB7 747 aaPredicted RBP12.71□□□□□ -0.37
AC011139.1-202ENST00000637744 MNX1P50219 401 aaPredicted RBP12.68□□□□□ -0.38
AC011139.1-202ENST00000637744 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
AC011139.1-202ENST00000637744 KLHL34Q8N239 644 aa12.61□□□□□ -0.39
AC011139.1-202ENST00000637744 CD44P16070 742 aaKnown RBP12.59□□□□□ -0.39
AC011139.1-202ENST00000637744 PAK3O75914 559 aaPredicted RBP12.56□□□□□ -0.4
AC011139.1-202ENST00000637744 EVX2Q03828 476 aa12.52□□□□□ -0.41
AC011139.1-202ENST00000637744 IFNLR1Q8IU57 520 aaPredicted RBP12.52□□□□□ -0.41
AC011139.1-202ENST00000637744 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
AC011139.1-202ENST00000637744 SP7Q8TDD2 431 aaPredicted RBP12.48□□□□□ -0.41
AC011139.1-202ENST00000637744 NUBP1P53384 320 aa12.47□□□□□ -0.41
AC011139.1-202ENST00000637744 TSPYL2Q9H2G4 693 aaPredicted RBP12.46□□□□□ -0.41
AC011139.1-202ENST00000637744 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
AC011139.1-202ENST00000637744 SPOCK2Q92563 424 aa12.45□□□□□ -0.42
AC011139.1-202ENST00000637744 FAM212AQ96EL1 285 aa12.43□□□□□ -0.42
AC011139.1-202ENST00000637744 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms