RNA–Protein interactions for RNA: ENST00000637358.1

PCCA-214, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-214ENST00000637358 AEBP2Q6ZN18 517 aaPredicted RBP27.51■■■□□ 2
PCCA-214ENST00000637358 CHIC1Q5VXU3 224 aa26.33■■□□□ 1.81
PCCA-214ENST00000637358 SENP3Q9H4L4 574 aaPredicted RBP23.5■■□□□ 1.35
PCCA-214ENST00000637358 PHF23Q9BUL5 403 aaPredicted RBP23.22■■□□□ 1.31
PCCA-214ENST00000637358 FOXD1Q16676 465 aa21.85■■□□□ 1.09
PCCA-214ENST00000637358 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
PCCA-214ENST00000637358 PPP6R1Q9UPN7 881 aa20.55■□□□□ 0.88
PCCA-214ENST00000637358 ADRA2BP18089 450 aa20.49■□□□□ 0.87
PCCA-214ENST00000637358 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
PCCA-214ENST00000637358 MSH5O43196 834 aa20.43■□□□□ 0.86
PCCA-214ENST00000637358 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
PCCA-214ENST00000637358 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
PCCA-214ENST00000637358 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
PCCA-214ENST00000637358 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
PCCA-214ENST00000637358 PPP4R3CPQ6ZMV5 832 aa18.53■□□□□ 0.56
PCCA-214ENST00000637358 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
PCCA-214ENST00000637358 HOXD11P31277 338 aaPredicted RBP18.04■□□□□ 0.48
PCCA-214ENST00000637358 RNF216Q9NWF9 866 aaPredicted RBP17.96■□□□□ 0.47
PCCA-214ENST00000637358 NCBP3Q53F19 620 aaKnown RBP17.9■□□□□ 0.46
PCCA-214ENST00000637358 DCAF8L1A6NGE4 600 aa17.86■□□□□ 0.45
PCCA-214ENST00000637358 NPM3O75607 178 aaKnown RBP17.59■□□□□ 0.41
PCCA-214ENST00000637358 DNAJC5BQ9UF47 199 aa17.44■□□□□ 0.38
PCCA-214ENST00000637358 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
PCCA-214ENST00000637358 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
PCCA-214ENST00000637358 KCNA4P22459 653 aa17.38■□□□□ 0.37
PCCA-214ENST00000637358 C1QBPQ07021 282 aaKnown RBP17.22■□□□□ 0.35
PCCA-214ENST00000637358 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.344e-6■□□□□ 8.4
PCCA-214ENST00000637358 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
PCCA-214ENST00000637358 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
PCCA-214ENST00000637358 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
PCCA-214ENST00000637358 CAPN15O75808 1086 aa16.5■□□□□ 0.23
PCCA-214ENST00000637358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.47■□□□□ 0.23
PCCA-214ENST00000637358 HNRNPUL2Q1KMD3 747 aaKnown RBP16.47■□□□□ 0.23
PCCA-214ENST00000637358 SLC4A1APQ9BWU0 796 aaKnown RBP16.46■□□□□ 0.23
PCCA-214ENST00000637358 APLP2Q06481 763 aa16.45■□□□□ 0.22
PCCA-214ENST00000637358 DSG3P32926 999 aa16.37■□□□□ 0.21
PCCA-214ENST00000637358 SAMD1Q6SPF0 538 aaPredicted RBP16.36■□□□□ 0.21
PCCA-214ENST00000637358 MYCNP04198 464 aaPredicted RBP16.29■□□□□ 0.2
PCCA-214ENST00000637358 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
PCCA-214ENST00000637358 TRHP20396 242 aaPredicted RBP16.27■□□□□ 0.2
PCCA-214ENST00000637358 FOXD4L1Q9NU39 408 aa16.2■□□□□ 0.18
PCCA-214ENST00000637358 ABCB7O75027 752 aa16.1■□□□□ 0.17
PCCA-214ENST00000637358 ZBTB22O15209 634 aa15.96■□□□□ 0.15
PCCA-214ENST00000637358 POLA2Q14181 598 aa15.89■□□□□ 0.13
PCCA-214ENST00000637358 ATF5Q9Y2D1 282 aaPredicted RBP15.85■□□□□ 0.13
PCCA-214ENST00000637358 ATXN8OSP0DMR3 200 aa15.73■□□□□ 0.11
PCCA-214ENST00000637358 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
PCCA-214ENST00000637358 ZBTB12Q9Y330 459 aaPredicted RBP15.61■□□□□ 0.09
PCCA-214ENST00000637358 POTEHQ6S545 545 aa15.43■□□□□ 0.06
PCCA-214ENST00000637358 CSRNP3Q8WYN3 585 aa15.41■□□□□ 0.06
PCCA-214ENST00000637358 OSCARQ8IYS5 282 aa15.33■□□□□ 0.05
PCCA-214ENST00000637358 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
PCCA-214ENST00000637358 FBLN2P98095 1184 aa15.29■□□□□ 0.04
PCCA-214ENST00000637358 EHMT2Q96KQ7 1210 aa15.26■□□□□ 0.03
PCCA-214ENST00000637358 CHRDL2Q6WN34 429 aa15.22■□□□□ 0.03
PCCA-214ENST00000637358 REM2Q8IYK8 340 aaPredicted RBP15.15■□□□□ 0.02
PCCA-214ENST00000637358 MKRN4PQ13434 485 aaPredicted RBP15.14■□□□□ 0.01
PCCA-214ENST00000637358 SPDYE2BA6NHP3 402 aa15.13■□□□□ 0.01
PCCA-214ENST00000637358 SPDYE6P0CI01 402 aa15.13■□□□□ 0.01
PCCA-214ENST00000637358 SPDYE2Q495Y8 402 aa15.13■□□□□ 0.01
PCCA-214ENST00000637358 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
PCCA-214ENST00000637358 PITPNM1O00562 1244 aa14.97□□□□□ -0.01
PCCA-214ENST00000637358 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
PCCA-214ENST00000637358 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
PCCA-214ENST00000637358 FXR2P51116 673 aaKnown RBP eCLIP14.84□□□□□ -0.03
PCCA-214ENST00000637358 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
PCCA-214ENST00000637358 CLEC11AQ9Y240 323 aa14.77□□□□□ -0.04
PCCA-214ENST00000637358 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
PCCA-214ENST00000637358 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
PCCA-214ENST00000637358 HAX1O00165 279 aa14.59□□□□□ -0.07
PCCA-214ENST00000637358 PRR29P0C7W0 189 aa14.57□□□□□ -0.08
PCCA-214ENST00000637358 SPDYE4A6NLX3 237 aa14.54□□□□□ -0.08
PCCA-214ENST00000637358 SP7Q8TDD2 431 aaPredicted RBP14.54□□□□□ -0.08
PCCA-214ENST00000637358 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
PCCA-214ENST00000637358 STAG3Q9UJ98 1225 aa14.43□□□□□ -0.1
PCCA-214ENST00000637358 EVX2Q03828 476 aa14.38□□□□□ -0.11
PCCA-214ENST00000637358 C19orf67A6NJJ6 358 aa14.35□□□□□ -0.11
PCCA-214ENST00000637358 FARP1Q9Y4F1 1045 aaPredicted RBP14.28□□□□□ -0.12
PCCA-214ENST00000637358 PROM2Q8N271 834 aa14.21□□□□□ -0.13
PCCA-214ENST00000637358 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
PCCA-214ENST00000637358 CD44P16070 742 aaKnown RBP14.15□□□□□ -0.14
PCCA-214ENST00000637358 GABBR2O75899 941 aa14.1□□□□□ -0.15
PCCA-214ENST00000637358 CLCN6P51797 869 aa14.02□□□□□ -0.16
PCCA-214ENST00000637358 NPM1P06748 294 aaKnown RBP eCLIP14.01□□□□□ -0.17
PCCA-214ENST00000637358 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
PCCA-214ENST00000637358 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
PCCA-214ENST00000637358 FKBP8Q14318 412 aa13.96□□□□□ -0.17
PCCA-214ENST00000637358 ZNF579Q8NAF0 562 aaKnown RBP13.95□□□□□ -0.18
PCCA-214ENST00000637358 PAK3O75914 559 aaPredicted RBP13.93□□□□□ -0.18
PCCA-214ENST00000637358 PLEKHG5O94827 1062 aa13.88□□□□□ -0.19
PCCA-214ENST00000637358 MIER1Q8N108 512 aa13.88□□□□□ -0.19
PCCA-214ENST00000637358 POTEIP0CG38 1075 aa13.77□□□□□ -0.21
PCCA-214ENST00000637358 PLCD3Q8N3E9 789 aa13.77□□□□□ -0.21
PCCA-214ENST00000637358 DCBLD2Q96PD2 775 aa13.77□□□□□ -0.21
PCCA-214ENST00000637358 PHF12Q96QT6 1004 aa13.76□□□□□ -0.21
PCCA-214ENST00000637358 GALR2O43603 387 aaPredicted RBP13.74□□□□□ -0.21
PCCA-214ENST00000637358 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
PCCA-214ENST00000637358 ZBTB47Q9UFB7 747 aaPredicted RBP13.7□□□□□ -0.22
PCCA-214ENST00000637358 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
PCCA-214ENST00000637358 LHX8Q68G74 356 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms