RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 NISCHQ9Y2I1 1504 aa12.2□□□□□ -0.46
EPB41-213ENST00000636666 SUPT5HO00267 1087 aaKnown RBP11.52□□□□□ -0.56
EPB41-213ENST00000636666 SHROOM4Q9ULL8 1493 aa11.51□□□□□ -0.57
EPB41-213ENST00000636666 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
EPB41-213ENST00000636666 PCGF6Q9BYE7 350 aa11.18□□□□□ -0.62
EPB41-213ENST00000636666 PPARGC1BQ86YN6 1023 aaKnown RBP11.02□□□□□ -0.64
EPB41-213ENST00000636666 HRCP23327 699 aa10.98□□□□□ -0.65
EPB41-213ENST00000636666 EHMT2Q96KQ7 1210 aa10.98□□□□□ -0.65
EPB41-213ENST00000636666 CHIC1Q5VXU3 224 aa10.84□□□□□ -0.67
EPB41-213ENST00000636666 LOC105371045A0A1W2PR82 267 aa10.83□□□□□ -0.68
EPB41-213ENST00000636666 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
EPB41-213ENST00000636666 TTBK1Q5TCY1 1321 aaPredicted RBP10.64□□□□□ -0.71
EPB41-213ENST00000636666 MYO15BQ96JP2 1530 aa10.63□□□□□ -0.71
EPB41-213ENST00000636666 TRIM26Q12899 539 aaPredicted RBP10.59□□□□□ -0.71
EPB41-213ENST00000636666 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
EPB41-213ENST00000636666 ZEB1P37275 1124 aaPredicted RBP10.45□□□□□ -0.74
EPB41-213ENST00000636666 CCER1Q8TC90 406 aaPredicted RBP10.45□□□□□ -0.74
EPB41-213ENST00000636666 PELP1Q8IZL8 1130 aaKnown RBP10.42□□□□□ -0.74
EPB41-213ENST00000636666 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.4□□□□□ -0.75
EPB41-213ENST00000636666 YTHDC1Q96MU7 727 aaKnown RBP10.39□□□□□ -0.75
EPB41-213ENST00000636666 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
EPB41-213ENST00000636666 CENPBP07199 599 aaPredicted RBP10.3□□□□□ -0.76
EPB41-213ENST00000636666 GTF3C3Q9Y5Q9 886 aa10.26□□□□□ -0.77
EPB41-213ENST00000636666 DCAF1Q9Y4B6 1507 aa10.26□□□□□ -0.77
EPB41-213ENST00000636666 ZCCHC6Q5VYS8 1495 aaKnown RBP10.26□□□□□ -0.77
EPB41-213ENST00000636666 RANGAP1P46060 587 aaPredicted RBP10.25□□□□□ -0.77
EPB41-213ENST00000636666 DIEXFQ68CQ4 756 aaKnown RBP10.22□□□□□ -0.77
EPB41-213ENST00000636666 NEUROD1Q13562 356 aa10.21□□□□□ -0.77
EPB41-213ENST00000636666 ACIN1Q9UKV3 1341 aaKnown RBP10.18□□□□□ -0.78
EPB41-213ENST00000636666 UBTFP17480 764 aaKnown RBP10.15□□□□□ -0.78
EPB41-213ENST00000636666 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
EPB41-213ENST00000636666 APLP2Q06481 763 aa10.05□□□□□ -0.8
EPB41-213ENST00000636666 CCDC180Q9P1Z9 1646 aa10.02□□□□□ -0.81
EPB41-213ENST00000636666 ZNF316A6NFI3 1004 aaPredicted RBP9.96□□□□□ -0.81
EPB41-213ENST00000636666 MYT1Q01538 1121 aa9.95□□□□□ -0.82
EPB41-213ENST00000636666 MIER1Q8N108 512 aa9.93□□□□□ -0.82
EPB41-213ENST00000636666 ITGAEP38570 1179 aa9.92□□□□□ -0.82
EPB41-213ENST00000636666 RSF1Q96T23 1441 aaPredicted RBP9.91□□□□□ -0.82
EPB41-213ENST00000636666 SCRIBQ14160 1630 aa9.9□□□□□ -0.82
EPB41-213ENST00000636666 BCANQ96GW7 911 aa9.88□□□□□ -0.83
EPB41-213ENST00000636666 ABCC9O60706 1549 aa9.81□□□□□ -0.84
EPB41-213ENST00000636666 RB1CC1Q8TDY2 1594 aa9.8□□□□□ -0.84
EPB41-213ENST00000636666 ATP1B4Q9UN42 357 aaPredicted RBP9.8□□□□□ -0.84
EPB41-213ENST00000636666 CSRNP3Q8WYN3 585 aa9.79□□□□□ -0.84
EPB41-213ENST00000636666 CECR2Q9BXF3 1484 aa9.74□□□□□ -0.85
EPB41-213ENST00000636666 PABPN1Q86U42 306 aaKnown RBP eCLIP9.73□□□□□ -0.85
EPB41-213ENST00000636666 CEP162Q5TB80 1403 aa9.71□□□□□ -0.85
EPB41-213ENST00000636666 NEFLP07196 543 aa9.71□□□□□ -0.85
EPB41-213ENST00000636666 ERICH6Q7L0X2 663 aa9.67□□□□□ -0.86
EPB41-213ENST00000636666 SOGA1O94964 1423 aa9.66□□□□□ -0.86
EPB41-213ENST00000636666 CNGB1Q14028 1251 aaPredicted RBP9.66□□□□□ -0.86
EPB41-213ENST00000636666 HIRIP3Q9BW71 556 aaPredicted RBP9.65□□□□□ -0.86
EPB41-213ENST00000636666 FKBP8Q14318 412 aa9.65□□□□□ -0.86
EPB41-213ENST00000636666 SUPT16HQ9Y5B9 1047 aaKnown RBP9.64□□□□□ -0.87
EPB41-213ENST00000636666 MROH2BQ7Z745 1585 aa9.62□□□□□ -0.87
EPB41-213ENST00000636666 DDX10Q13206 875 aaKnown RBP9.62□□□□□ -0.87
EPB41-213ENST00000636666 ABCC8Q09428 1581 aa9.62□□□□□ -0.87
EPB41-213ENST00000636666 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
EPB41-213ENST00000636666 TRIM52Q96A61 297 aa9.62□□□□□ -0.87
EPB41-213ENST00000636666 FAM50AQ14320 339 aaKnown RBP9.6□□□□□ -0.87
EPB41-213ENST00000636666 KCNH8Q96L42 1107 aa9.58□□□□□ -0.88
EPB41-213ENST00000636666 TNIKQ9UKE5 1360 aa9.57□□□□□ -0.88
EPB41-213ENST00000636666 CLIP1P30622 1438 aa9.55□□□□□ -0.88
EPB41-213ENST00000636666 RUSC2Q8N2Y8 1516 aa9.55□□□□□ -0.88
EPB41-213ENST00000636666 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
EPB41-213ENST00000636666 WIZO95785 1651 aa9.54□□□□□ -0.88
EPB41-213ENST00000636666 P3H3Q8IVL6 736 aa9.54□□□□□ -0.88
EPB41-213ENST00000636666 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
EPB41-213ENST00000636666 ANP32EQ9BTT0 268 aa9.52□□□□□ -0.88
EPB41-213ENST00000636666 POLR3GLQ9BT43 218 aa9.5□□□□□ -0.89
EPB41-213ENST00000636666 ANP32CO43423 234 aa9.49□□□□□ -0.89
EPB41-213ENST00000636666 GOLGA3Q08378 1498 aa9.49□□□□□ -0.89
EPB41-213ENST00000636666 KANK4Q5T7N3 995 aaPredicted RBP9.48□□□□□ -0.89
EPB41-213ENST00000636666 SIN3AQ96ST3 1273 aa9.48□□□□□ -0.89
EPB41-213ENST00000636666 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
EPB41-213ENST00000636666 SENP3-EIF4A1A0A087X0R7 540 aa9.44□□□□□ -0.9
EPB41-213ENST00000636666 WRNQ14191 1432 aaPredicted RBP eCLIP9.44□□□□□ -0.9
EPB41-213ENST00000636666 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
EPB41-213ENST00000636666 CLSPNQ9HAW4 1339 aa9.42□□□□□ -0.9
EPB41-213ENST00000636666 CDK11AQ9UQ88 783 aaPredicted RBP9.42□□□□□ -0.9
EPB41-213ENST00000636666 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
EPB41-213ENST00000636666 EEA1Q15075 1411 aa9.39□□□□□ -0.91
EPB41-213ENST00000636666 CEP164Q9UPV0 1460 aa9.38□□□□□ -0.91
EPB41-213ENST00000636666 VPS8Q8N3P4 1428 aa9.38□□□□□ -0.91
EPB41-213ENST00000636666 DHX57Q6P158 1386 aaKnown RBP9.37□□□□□ -0.91
EPB41-213ENST00000636666 NBR1Q14596 966 aa9.37□□□□□ -0.91
EPB41-213ENST00000636666 FAM9BQ8IZU0 186 aa9.37□□□□□ -0.91
EPB41-213ENST00000636666 BAZ1AQ9NRL2 1556 aaPredicted RBP9.36□□□□□ -0.91
EPB41-213ENST00000636666 ARID3CA6NKF2 412 aa9.36□□□□□ -0.91
EPB41-213ENST00000636666 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
EPB41-213ENST00000636666 ZNF326Q5BKZ1 582 aaKnown RBP9.32□□□□□ -0.92
EPB41-213ENST00000636666 TONSLQ96HA7 1378 aa9.31□□□□□ -0.92
EPB41-213ENST00000636666 CHIC2Q9UKJ5 165 aa9.31□□□□□ -0.92
EPB41-213ENST00000636666 NACADO15069 1562 aa9.3□□□□□ -0.92
EPB41-213ENST00000636666 CCNB3Q8WWL7 1395 aa9.3□□□□□ -0.92
EPB41-213ENST00000636666 RAB3GAP2Q9H2M9 1393 aa9.29□□□□□ -0.92
EPB41-213ENST00000636666 B4GALNT3Q6L9W6 998 aa9.28□□□□□ -0.92
EPB41-213ENST00000636666 NPM2Q86SE8 214 aaKnown RBP9.28□□□□□ -0.92
EPB41-213ENST00000636666 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
EPB41-213ENST00000636666 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms