RNA–Protein interactions for RNA: ENST00000636388.1

CASC15-208, Transcript of cancer susceptibility 15, humanhuman

TSL 5 BASIC

Gene CASC15, Length 1,174 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC15-208ENST00000636388 AEBP2Q6ZN18 517 aaPredicted RBP31.53■■■□□ 2.64
CASC15-208ENST00000636388 CHIC1Q5VXU3 224 aa30.67■■■□□ 2.5
CASC15-208ENST00000636388 PHF23Q9BUL5 403 aaPredicted RBP26.89■■□□□ 1.9
CASC15-208ENST00000636388 SENP3Q9H4L4 574 aaPredicted RBP26.88■■□□□ 1.89
CASC15-208ENST00000636388 FOXD1Q16676 465 aa24.9■■□□□ 1.58
CASC15-208ENST00000636388 PLPPR3Q6T4P5 718 aa24.83■■□□□ 1.57
CASC15-208ENST00000636388 PPP6R1Q9UPN7 881 aa23.77■■□□□ 1.4
CASC15-208ENST00000636388 ADRA2BP18089 450 aa23.72■■□□□ 1.39
CASC15-208ENST00000636388 PIAS4Q8N2W9 510 aaPredicted RBP23.43■■□□□ 1.34
CASC15-208ENST00000636388 MSH5O43196 834 aa23.12■■□□□ 1.29
CASC15-208ENST00000636388 SCAF1Q9H7N4 1312 aaKnown RBP21.82■■□□□ 1.08
CASC15-208ENST00000636388 PPP4R3CPQ6ZMV5 832 aa21.81■■□□□ 1.08
CASC15-208ENST00000636388 MAPK8IP2Q13387 824 aaPredicted RBP21.56■■□□□ 1.04
CASC15-208ENST00000636388 DMRT2Q9Y5R5 561 aa21.42■■□□□ 1.02
CASC15-208ENST00000636388 POTEDQ86YR6 584 aa21.33■■□□□ 1.01
CASC15-208ENST00000636388 CNKSR2Q8WXI2 1034 aa21.29■■□□□ 1
CASC15-208ENST00000636388 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
CASC15-208ENST00000636388 KCNA4P22459 653 aa21.05■□□□□ 0.96
CASC15-208ENST00000636388 RNF216Q9NWF9 866 aaPredicted RBP20.94■□□□□ 0.94
CASC15-208ENST00000636388 HOXD11P31277 338 aaPredicted RBP20.91■□□□□ 0.94
CASC15-208ENST00000636388 NPM3O75607 178 aaKnown RBP20.87■□□□□ 0.93
CASC15-208ENST00000636388 DNAJC5BQ9UF47 199 aa20.45■□□□□ 0.86
CASC15-208ENST00000636388 DCAF8L1A6NGE4 600 aa20.38■□□□□ 0.85
CASC15-208ENST00000636388 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
CASC15-208ENST00000636388 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.86■□□□□ 0.77
CASC15-208ENST00000636388 RNF39Q9H2S5 420 aa19.76■□□□□ 0.75
CASC15-208ENST00000636388 SLC4A2P04920 1241 aa19.75■□□□□ 0.75
CASC15-208ENST00000636388 C1QBPQ07021 282 aaKnown RBP19.55■□□□□ 0.72
CASC15-208ENST00000636388 U3KPZ7 1027 aaPredicted RBP19.53■□□□□ 0.72
CASC15-208ENST00000636388 FOXD4L1Q9NU39 408 aa19.49■□□□□ 0.71
CASC15-208ENST00000636388 ZBTB22O15209 634 aa19.35■□□□□ 0.69
CASC15-208ENST00000636388 CACNB1Q02641 598 aaPredicted RBP19.35■□□□□ 0.69
CASC15-208ENST00000636388 MYCNP04198 464 aaPredicted RBP19.34■□□□□ 0.69
CASC15-208ENST00000636388 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.3■□□□□ 0.68
CASC15-208ENST00000636388 HNRNPUL2Q1KMD3 747 aaKnown RBP19.3■□□□□ 0.68
CASC15-208ENST00000636388 SAMD1Q6SPF0 538 aaPredicted RBP19.2■□□□□ 0.66
CASC15-208ENST00000636388 APLP2Q06481 763 aa19.16■□□□□ 0.66
CASC15-208ENST00000636388 EHMT2Q96KQ7 1210 aa19.15■□□□□ 0.66
CASC15-208ENST00000636388 CSRNP3Q8WYN3 585 aa19.09■□□□□ 0.65
CASC15-208ENST00000636388 SPINK5Q9NQ38 1064 aaPredicted RBP19■□□□□ 0.63
CASC15-208ENST00000636388 CAPN15O75808 1086 aa18.94■□□□□ 0.62
CASC15-208ENST00000636388 ATXN8OSP0DMR3 200 aa18.89■□□□□ 0.61
CASC15-208ENST00000636388 ZNF219Q9P2Y4 722 aaPredicted RBP18.88■□□□□ 0.61
CASC15-208ENST00000636388 TRHP20396 242 aaPredicted RBP18.79■□□□□ 0.6
CASC15-208ENST00000636388 ATF5Q9Y2D1 282 aaPredicted RBP18.74■□□□□ 0.59
CASC15-208ENST00000636388 DSG3P32926 999 aa18.71■□□□□ 0.59
CASC15-208ENST00000636388 ABCB7O75027 752 aa18.53■□□□□ 0.56
CASC15-208ENST00000636388 POLA2Q14181 598 aa18.47■□□□□ 0.55
CASC15-208ENST00000636388 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
CASC15-208ENST00000636388 FBLN2P98095 1184 aa18.05■□□□□ 0.48
CASC15-208ENST00000636388 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
CASC15-208ENST00000636388 RBM42Q9BTD8 480 aaKnown RBP17.91■□□□□ 0.46
CASC15-208ENST00000636388 OSCARQ8IYS5 282 aa17.85■□□□□ 0.45
CASC15-208ENST00000636388 SPDYE2BA6NHP3 402 aa17.72■□□□□ 0.43
CASC15-208ENST00000636388 SPDYE6P0CI01 402 aa17.72■□□□□ 0.43
CASC15-208ENST00000636388 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
CASC15-208ENST00000636388 AKT1S1Q96B36 256 aa17.62■□□□□ 0.41
CASC15-208ENST00000636388 ZNF692Q9BU19 519 aaPredicted RBP17.56■□□□□ 0.4
CASC15-208ENST00000636388 SSUH2Q9Y2M2 353 aa17.55■□□□□ 0.4
CASC15-208ENST00000636388 SPDYE4A6NLX3 237 aa17.47■□□□□ 0.39
CASC15-208ENST00000636388 REM2Q8IYK8 340 aaPredicted RBP17.4■□□□□ 0.38
CASC15-208ENST00000636388 PABPN1Q86U42 306 aaKnown RBP eCLIP17.32■□□□□ 0.36
CASC15-208ENST00000636388 FKBP8Q14318 412 aa17.26■□□□□ 0.35
CASC15-208ENST00000636388 SPDYE1Q8NFV5 336 aaPredicted RBP17.23■□□□□ 0.35
CASC15-208ENST00000636388 PROM2Q8N271 834 aa17.22■□□□□ 0.35
CASC15-208ENST00000636388 PITPNM1O00562 1244 aa17.2■□□□□ 0.34
CASC15-208ENST00000636388 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
CASC15-208ENST00000636388 CLEC11AQ9Y240 323 aa17.08■□□□□ 0.32
CASC15-208ENST00000636388 STAG3Q9UJ98 1225 aa17.06■□□□□ 0.32
CASC15-208ENST00000636388 FXR2P51116 673 aaKnown RBP eCLIP16.95■□□□□ 0.3
CASC15-208ENST00000636388 PRR29P0C7W0 189 aa16.94■□□□□ 0.3
CASC15-208ENST00000636388 PIP4P2Q8N4L2 257 aa16.91■□□□□ 0.3
CASC15-208ENST00000636388 POTEHQ6S545 545 aa16.86■□□□□ 0.29
CASC15-208ENST00000636388 FBXO3Q9UK99 471 aa16.79■□□□□ 0.28
CASC15-208ENST00000636388 PRKAR2AP13861 404 aaKnown RBP16.76■□□□□ 0.27
CASC15-208ENST00000636388 CREBZFQ9NS37 354 aa16.68■□□□□ 0.26
CASC15-208ENST00000636388 CHADLQ6NUI6 762 aa16.66■□□□□ 0.26
CASC15-208ENST00000636388 PLEKHG5O94827 1062 aa16.56■□□□□ 0.24
CASC15-208ENST00000636388 FARP1Q9Y4F1 1045 aaPredicted RBP16.56■□□□□ 0.24
CASC15-208ENST00000636388 MIER1Q8N108 512 aa16.55■□□□□ 0.24
CASC15-208ENST00000636388 VASPP50552 380 aaPredicted RBP16.52■□□□□ 0.24
CASC15-208ENST00000636388 PLCD3Q8N3E9 789 aa16.52■□□□□ 0.24
CASC15-208ENST00000636388 MNX1P50219 401 aaPredicted RBP16.49■□□□□ 0.23
CASC15-208ENST00000636388 NPM1P06748 294 aaKnown RBP eCLIP16.44■□□□□ 0.22
CASC15-208ENST00000636388 ZBTB47Q9UFB7 747 aaPredicted RBP16.44■□□□□ 0.22
CASC15-208ENST00000636388 HAX1O00165 279 aa16.39■□□□□ 0.21
CASC15-208ENST00000636388 C19orf67A6NJJ6 358 aa16.38■□□□□ 0.21
CASC15-208ENST00000636388 CD44P16070 742 aaKnown RBP16.27■□□□□ 0.2
CASC15-208ENST00000636388 IFNLR1Q8IU57 520 aaPredicted RBP16.25■□□□□ 0.19
CASC15-208ENST00000636388 KLHL34Q8N239 644 aa16.24■□□□□ 0.19
CASC15-208ENST00000636388 PAK3O75914 559 aaPredicted RBP16.21■□□□□ 0.19
CASC15-208ENST00000636388 EVX2Q03828 476 aa16.2■□□□□ 0.18
CASC15-208ENST00000636388 NUBP1P53384 320 aa16.19■□□□□ 0.18
CASC15-208ENST00000636388 RASEFQ8IZ41 740 aa16.14■□□□□ 0.17
CASC15-208ENST00000636388 SP7Q8TDD2 431 aaPredicted RBP16.14■□□□□ 0.17
CASC15-208ENST00000636388 ZRANB1Q9UGI0 708 aa16.14■□□□□ 0.17
CASC15-208ENST00000636388 SPOCK2Q92563 424 aa16.13■□□□□ 0.17
CASC15-208ENST00000636388 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
CASC15-208ENST00000636388 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
CASC15-208ENST00000636388 TSPYL2Q9H2G4 693 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms