RNA–Protein interactions for RNA: ENST00000634810.1

ATP7B-214, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best)

Gene ATP7B, Length 5,825 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-214ENST00000634810 DCAF8L2P0C7V8 631 aa23.63■■□□□ 1.37
ATP7B-214ENST00000634810 NISCHQ9Y2I1 1504 aa22.6■■□□□ 1.21
ATP7B-214ENST00000634810 SUPT5HO00267 1087 aaKnown RBP22.29■■□□□ 1.16
ATP7B-214ENST00000634810 SHROOM4Q9ULL8 1493 aa21.83■■□□□ 1.09
ATP7B-214ENST00000634810 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
ATP7B-214ENST00000634810 PELP1Q8IZL8 1130 aaKnown RBP21.55■■□□□ 1.04
ATP7B-214ENST00000634810 APLP2Q06481 763 aa21.49■■□□□ 1.03
ATP7B-214ENST00000634810 FAM9AQ8IZU1 332 aaPredicted RBP21.27■■□□□ 1
ATP7B-214ENST00000634810 TTBK1Q5TCY1 1321 aaPredicted RBP21.01■□□□□ 0.95
ATP7B-214ENST00000634810 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.93
ATP7B-214ENST00000634810 PCGF6Q9BYE7 350 aa20.79■□□□□ 0.92
ATP7B-214ENST00000634810 ATP1B4Q9UN42 357 aaPredicted RBP20.74■□□□□ 0.91
ATP7B-214ENST00000634810 ABCC9O60706 1549 aa20.69■□□□□ 0.9
ATP7B-214ENST00000634810 ERICH6Q7L0X2 663 aa20.67■□□□□ 0.9
ATP7B-214ENST00000634810 TRIM41Q8WV44 630 aa20.66■□□□□ 0.9
ATP7B-214ENST00000634810 CENPBP07199 599 aaPredicted RBP20.62■□□□□ 0.89
ATP7B-214ENST00000634810 CCER1Q8TC90 406 aaPredicted RBP20.61■□□□□ 0.89
ATP7B-214ENST00000634810 ZEB1P37275 1124 aaPredicted RBP20.59■□□□□ 0.89
ATP7B-214ENST00000634810 UBTFP17480 764 aaKnown RBP20.52■□□□□ 0.88
ATP7B-214ENST00000634810 NEFLP07196 543 aa20.32■□□□□ 0.84
ATP7B-214ENST00000634810 PABPN1Q86U42 306 aaKnown RBP eCLIP20.2■□□□□ 0.82
ATP7B-214ENST00000634810 YTHDC1Q96MU7 727 aaKnown RBP20.18■□□□□ 0.82
ATP7B-214ENST00000634810 MYT1LQ9UL68 1186 aa20.07■□□□□ 0.8
ATP7B-214ENST00000634810 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
ATP7B-214ENST00000634810 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
ATP7B-214ENST00000634810 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
ATP7B-214ENST00000634810 ITGAEP38570 1179 aa19.92■□□□□ 0.78
ATP7B-214ENST00000634810 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
ATP7B-214ENST00000634810 TRIM26Q12899 539 aaPredicted RBP19.88■□□□□ 0.77
ATP7B-214ENST00000634810 DAXXQ9UER7 740 aaPredicted RBP19.84■□□□□ 0.77
ATP7B-214ENST00000634810 MYT1Q01538 1121 aa19.74■□□□□ 0.75
ATP7B-214ENST00000634810 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
ATP7B-214ENST00000634810 CNGB1Q14028 1251 aaPredicted RBP19.65■□□□□ 0.74
ATP7B-214ENST00000634810 SLC4A1APQ9BWU0 796 aaKnown RBP19.62■□□□□ 0.73
ATP7B-214ENST00000634810 HRCP23327 699 aa19.61■□□□□ 0.73
ATP7B-214ENST00000634810 FBLN2P98095 1184 aa19.56■□□□□ 0.72
ATP7B-214ENST00000634810 LOC105371045A0A1W2PR82 267 aa19.56■□□□□ 0.72
ATP7B-214ENST00000634810 FAM50AQ14320 339 aaKnown RBP19.41■□□□□ 0.7
ATP7B-214ENST00000634810 CLSPNQ9HAW4 1339 aa19.39■□□□□ 0.69
ATP7B-214ENST00000634810 RB1CC1Q8TDY2 1594 aa19.39■□□□□ 0.69
ATP7B-214ENST00000634810 TRIM52Q96A61 297 aa19.36■□□□□ 0.69
ATP7B-214ENST00000634810 ZNF316A6NFI3 1004 aaPredicted RBP19.36■□□□□ 0.69
ATP7B-214ENST00000634810 NPM1P06748 294 aaKnown RBP eCLIP19.31■□□□□ 0.68
ATP7B-214ENST00000634810 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
ATP7B-214ENST00000634810 DIEXFQ68CQ4 756 aaKnown RBP19.24■□□□□ 0.67
ATP7B-214ENST00000634810 CCDC180Q9P1Z9 1646 aa19.23■□□□□ 0.67
ATP7B-214ENST00000634810 NEUROD1Q13562 356 aa19.22■□□□□ 0.67
ATP7B-214ENST00000634810 ZNF326Q5BKZ1 582 aaKnown RBP19.14■□□□□ 0.65
ATP7B-214ENST00000634810 SCRIBQ14160 1630 aa19.13■□□□□ 0.65
ATP7B-214ENST00000634810 ZBTB47Q9UFB7 747 aaPredicted RBP19.1■□□□□ 0.65
ATP7B-214ENST00000634810 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
ATP7B-214ENST00000634810 ANP32CO43423 234 aa19.06■□□□□ 0.64
ATP7B-214ENST00000634810 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
ATP7B-214ENST00000634810 SLC24A1O60721 1099 aa18.98■□□□□ 0.63
ATP7B-214ENST00000634810 NACADO15069 1562 aa18.97■□□□□ 0.63
ATP7B-214ENST00000634810 BCANQ96GW7 911 aa18.97■□□□□ 0.63
ATP7B-214ENST00000634810 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
ATP7B-214ENST00000634810 NEFMP07197 916 aa18.94■□□□□ 0.62
ATP7B-214ENST00000634810 CDK11AQ9UQ88 783 aaPredicted RBP18.91■□□□□ 0.62
ATP7B-214ENST00000634810 TRHP20396 242 aaPredicted RBP18.89■□□□□ 0.61
ATP7B-214ENST00000634810 ARID3CA6NKF2 412 aa18.86■□□□□ 0.61
ATP7B-214ENST00000634810 BCL11AQ9H165 835 aa18.86■□□□□ 0.61
ATP7B-214ENST00000634810 P3H3Q8IVL6 736 aa18.85■□□□□ 0.61
ATP7B-214ENST00000634810 CHMP7Q8WUX9 453 aaPredicted RBP18.83■□□□□ 0.61
ATP7B-214ENST00000634810 ZNF777Q9ULD5 760 aaPredicted RBP18.8■□□□□ 0.6
ATP7B-214ENST00000634810 GTF3C3Q9Y5Q9 886 aa18.78■□□□□ 0.6
ATP7B-214ENST00000634810 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
ATP7B-214ENST00000634810 PLPPR3Q6T4P5 718 aa18.67■□□□□ 0.58
ATP7B-214ENST00000634810 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
ATP7B-214ENST00000634810 STAG3Q9UJ98 1225 aa18.63■□□□□ 0.57
ATP7B-214ENST00000634810 ANP32AP39687 249 aaKnown RBP18.62■□□□□ 0.57
ATP7B-214ENST00000634810 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
ATP7B-214ENST00000634810 TONSLQ96HA7 1378 aa18.55■□□□□ 0.56
ATP7B-214ENST00000634810 NPM2Q86SE8 214 aaKnown RBP18.54■□□□□ 0.56
ATP7B-214ENST00000634810 ZCCHC6Q5VYS8 1495 aaKnown RBP18.5■□□□□ 0.55
ATP7B-214ENST00000634810 BAZ1BQ9UIG0 1483 aaKnown RBP18.49■□□□□ 0.55
ATP7B-214ENST00000634810 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
ATP7B-214ENST00000634810 HSP90AA1P07900 732 aaKnown RBP18.46■□□□□ 0.55
ATP7B-214ENST00000634810 ACIN1Q9UKV3 1341 aaKnown RBP18.45■□□□□ 0.54
ATP7B-214ENST00000634810 ANP32BQ92688 251 aaKnown RBP18.43■□□□□ 0.54
ATP7B-214ENST00000634810 ARID4BQ4LE39 1312 aaPredicted RBP18.43■□□□□ 0.54
ATP7B-214ENST00000634810 UPF2Q9HAU5 1272 aaKnown RBP18.42■□□□□ 0.54
ATP7B-214ENST00000634810 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.4■□□□□ 0.542e-6■□□□□ 11.3
ATP7B-214ENST00000634810 HNRNPUQ00839 825 aaKnown RBP eCLIP18.39■□□□□ 0.53
ATP7B-214ENST00000634810 FAM9BQ8IZU0 186 aa18.39■□□□□ 0.53
ATP7B-214ENST00000634810 PDS5BQ9NTI5 1447 aa18.38■□□□□ 0.53
ATP7B-214ENST00000634810 FKBP8Q14318 412 aa18.38■□□□□ 0.53
ATP7B-214ENST00000634810 CHIC2Q9UKJ5 165 aa18.35■□□□□ 0.53
ATP7B-214ENST00000634810 SALL2Q9Y467 1007 aaPredicted RBP18.33■□□□□ 0.53
ATP7B-214ENST00000634810 DDX10Q13206 875 aaKnown RBP18.33■□□□□ 0.52
ATP7B-214ENST00000634810 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
ATP7B-214ENST00000634810 TMC1Q8TDI8 760 aa18.31■□□□□ 0.52
ATP7B-214ENST00000634810 WDR43Q15061 677 aaKnown RBP eCLIP18.31■□□□□ 0.52
ATP7B-214ENST00000634810 TSPY4P0CV99 314 aa18.29■□□□□ 0.52
ATP7B-214ENST00000634810 TSPY10P0CW01 314 aa18.29■□□□□ 0.52
ATP7B-214ENST00000634810 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
ATP7B-214ENST00000634810 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
ATP7B-214ENST00000634810 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
ATP7B-214ENST00000634810 CCDC136Q96JN2 1154 aa18.22■□□□□ 0.51
ATP7B-214ENST00000634810 KCNH8Q96L42 1107 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms