RNA–Protein interactions for RNA: ENST00000634467.1

AC055839.1-201, humanhuman

BASIC

Gene AC055839.1, Length 498 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055839.1-201ENST00000634467 AEBP2Q6ZN18 517 aaPredicted RBP16.59■□□□□ 0.25
AC055839.1-201ENST00000634467 CHIC1Q5VXU3 224 aa16.24■□□□□ 0.19
AC055839.1-201ENST00000634467 PHF23Q9BUL5 403 aaPredicted RBP14.35□□□□□ -0.11
AC055839.1-201ENST00000634467 SENP3Q9H4L4 574 aaPredicted RBP13.95□□□□□ -0.18
AC055839.1-201ENST00000634467 PLPPR3Q6T4P5 718 aa13.18□□□□□ -0.3
AC055839.1-201ENST00000634467 FOXD1Q16676 465 aa13.01□□□□□ -0.33
AC055839.1-201ENST00000634467 PPP6R1Q9UPN7 881 aa12.63□□□□□ -0.39
AC055839.1-201ENST00000634467 ADRA2BP18089 450 aa12.59□□□□□ -0.39
AC055839.1-201ENST00000634467 PIAS4Q8N2W9 510 aaPredicted RBP12.24□□□□□ -0.45
AC055839.1-201ENST00000634467 MSH5O43196 834 aa11.87□□□□□ -0.51
AC055839.1-201ENST00000634467 PPP4R3CPQ6ZMV5 832 aa11.66□□□□□ -0.54
AC055839.1-201ENST00000634467 KCNA4P22459 653 aa11.53□□□□□ -0.56
AC055839.1-201ENST00000634467 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
AC055839.1-201ENST00000634467 SCAF1Q9H7N4 1312 aaKnown RBP11.4□□□□□ -0.58
AC055839.1-201ENST00000634467 NCBP3Q53F19 620 aaKnown RBP11.3□□□□□ -0.6
AC055839.1-201ENST00000634467 CNKSR2Q8WXI2 1034 aa11.29□□□□□ -0.6
AC055839.1-201ENST00000634467 NPM3O75607 178 aaKnown RBP11.23□□□□□ -0.61
AC055839.1-201ENST00000634467 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
AC055839.1-201ENST00000634467 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
AC055839.1-201ENST00000634467 HOXD11P31277 338 aaPredicted RBP11.01□□□□□ -0.65
AC055839.1-201ENST00000634467 SLC4A1APQ9BWU0 796 aaKnown RBP10.94□□□□□ -0.66
AC055839.1-201ENST00000634467 DNAJC5BQ9UF47 199 aa10.9□□□□□ -0.66
AC055839.1-201ENST00000634467 EHMT2Q96KQ7 1210 aa10.75□□□□□ -0.69
AC055839.1-201ENST00000634467 POTEDQ86YR6 584 aa10.7□□□□□ -0.7
AC055839.1-201ENST00000634467 ZBTB22O15209 634 aa10.65□□□□□ -0.7
AC055839.1-201ENST00000634467 CSRNP3Q8WYN3 585 aa10.65□□□□□ -0.7
AC055839.1-201ENST00000634467 DCAF8L1A6NGE4 600 aa10.63□□□□□ -0.71
AC055839.1-201ENST00000634467 SLC4A2P04920 1241 aa10.62□□□□□ -0.71
AC055839.1-201ENST00000634467 FOXD4L1Q9NU39 408 aa10.53□□□□□ -0.72
AC055839.1-201ENST00000634467 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.42□□□□□ -0.74
AC055839.1-201ENST00000634467 MYCNP04198 464 aaPredicted RBP10.34□□□□□ -0.75
AC055839.1-201ENST00000634467 U3KPZ7 1027 aaPredicted RBP10.34□□□□□ -0.75
AC055839.1-201ENST00000634467 RNF39Q9H2S5 420 aa10.23□□□□□ -0.77
AC055839.1-201ENST00000634467 ATXN8OSP0DMR3 200 aa10.14□□□□□ -0.79
AC055839.1-201ENST00000634467 ATF5Q9Y2D1 282 aaPredicted RBP10.14□□□□□ -0.79
AC055839.1-201ENST00000634467 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
AC055839.1-201ENST00000634467 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
AC055839.1-201ENST00000634467 SAMD1Q6SPF0 538 aaPredicted RBP10.12□□□□□ -0.79
AC055839.1-201ENST00000634467 C1QBPQ07021 282 aaKnown RBP10.07□□□□□ -0.8
AC055839.1-201ENST00000634467 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
AC055839.1-201ENST00000634467 APLP2Q06481 763 aa9.97□□□□□ -0.81
AC055839.1-201ENST00000634467 CAPN15O75808 1086 aa9.91□□□□□ -0.82
AC055839.1-201ENST00000634467 TRHP20396 242 aaPredicted RBP9.9□□□□□ -0.82
AC055839.1-201ENST00000634467 ZNF219Q9P2Y4 722 aaPredicted RBP9.89□□□□□ -0.83
AC055839.1-201ENST00000634467 CACNB1Q02641 598 aaPredicted RBP9.85□□□□□ -0.83
AC055839.1-201ENST00000634467 ABCB7O75027 752 aa9.78□□□□□ -0.84
AC055839.1-201ENST00000634467 DSG3P32926 999 aa9.78□□□□□ -0.84
AC055839.1-201ENST00000634467 POLA2Q14181 598 aa9.78□□□□□ -0.84
AC055839.1-201ENST00000634467 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
AC055839.1-201ENST00000634467 FBLN2P98095 1184 aa9.57□□□□□ -0.88
AC055839.1-201ENST00000634467 FKBP8Q14318 412 aa9.56□□□□□ -0.88
AC055839.1-201ENST00000634467 ZBTB12Q9Y330 459 aaPredicted RBP9.55□□□□□ -0.88
AC055839.1-201ENST00000634467 SPDYE4A6NLX3 237 aa9.45□□□□□ -0.9
AC055839.1-201ENST00000634467 OSCARQ8IYS5 282 aa9.45□□□□□ -0.9
AC055839.1-201ENST00000634467 PROM2Q8N271 834 aa9.37□□□□□ -0.91
AC055839.1-201ENST00000634467 SPDYE2BA6NHP3 402 aa9.35□□□□□ -0.91
AC055839.1-201ENST00000634467 SPDYE6P0CI01 402 aa9.35□□□□□ -0.91
AC055839.1-201ENST00000634467 SPDYE2Q495Y8 402 aa9.35□□□□□ -0.91
AC055839.1-201ENST00000634467 SSUH2Q9Y2M2 353 aa9.33□□□□□ -0.92
AC055839.1-201ENST00000634467 ZNF692Q9BU19 519 aaPredicted RBP9.32□□□□□ -0.92
AC055839.1-201ENST00000634467 PABPN1Q86U42 306 aaKnown RBP eCLIP9.23□□□□□ -0.93
AC055839.1-201ENST00000634467 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
AC055839.1-201ENST00000634467 AKT1S1Q96B36 256 aa9.18□□□□□ -0.94
AC055839.1-201ENST00000634467 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
AC055839.1-201ENST00000634467 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
AC055839.1-201ENST00000634467 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
AC055839.1-201ENST00000634467 SPDYE1Q8NFV5 336 aaPredicted RBP9.04□□□□□ -0.96
AC055839.1-201ENST00000634467 STAG3Q9UJ98 1225 aa9.04□□□□□ -0.96
AC055839.1-201ENST00000634467 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
AC055839.1-201ENST00000634467 CLEC11AQ9Y240 323 aa9□□□□□ -0.97
AC055839.1-201ENST00000634467 IFNLR1Q8IU57 520 aaPredicted RBP8.99□□□□□ -0.97
AC055839.1-201ENST00000634467 NISCHQ9Y2I1 1504 aa8.98□□□□□ -0.97
AC055839.1-201ENST00000634467 PRR29P0C7W0 189 aa8.93□□□□□ -0.98
AC055839.1-201ENST00000634467 MIER1Q8N108 512 aa8.92□□□□□ -0.98
AC055839.1-201ENST00000634467 PLCD3Q8N3E9 789 aa8.91□□□□□ -0.98
AC055839.1-201ENST00000634467 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
AC055839.1-201ENST00000634467 CREBZFQ9NS37 354 aa8.9□□□□□ -0.98
AC055839.1-201ENST00000634467 CHRDL2Q6WN34 429 aa8.86□□□□□ -0.99
AC055839.1-201ENST00000634467 MNX1P50219 401 aaPredicted RBP8.85□□□□□ -0.99
AC055839.1-201ENST00000634467 AMER1Q5JTC6 1135 aaPredicted RBP8.85□□□□□ -0.99
AC055839.1-201ENST00000634467 FXR2P51116 673 aaKnown RBP eCLIP8.84□□□□□ -0.99
AC055839.1-201ENST00000634467 KLHL34Q8N239 644 aa8.83□□□□□ -1
AC055839.1-201ENST00000634467 CHADLQ6NUI6 762 aa8.82□□□□□ -1
AC055839.1-201ENST00000634467 PIP4P2Q8N4L2 257 aa8.8□□□□□ -1
AC055839.1-201ENST00000634467 SPOCK2Q92563 424 aa8.8□□□□□ -1
AC055839.1-201ENST00000634467 PLEKHG5O94827 1062 aa8.79□□□□□ -1
AC055839.1-201ENST00000634467 PRKAR2AP13861 404 aaKnown RBP8.77□□□□□ -1.01
AC055839.1-201ENST00000634467 ZBTB47Q9UFB7 747 aaPredicted RBP8.76□□□□□ -1.01
AC055839.1-201ENST00000634467 NUBP1P53384 320 aa8.75□□□□□ -1.01
AC055839.1-201ENST00000634467 PKD2Q13563 968 aa8.73□□□□□ -1.01
AC055839.1-201ENST00000634467 FARP1Q9Y4F1 1045 aaPredicted RBP8.72□□□□□ -1.01
AC055839.1-201ENST00000634467 RASEFQ8IZ41 740 aa8.69□□□□□ -1.02
AC055839.1-201ENST00000634467 NPM1P06748 294 aaKnown RBP eCLIP8.66□□□□□ -1.02
AC055839.1-201ENST00000634467 CIZ1Q9ULV3 898 aaPredicted RBP8.64□□□□□ -1.03
AC055839.1-201ENST00000634467 DCAF8Q5TAQ9 597 aa8.61□□□□□ -1.03
AC055839.1-201ENST00000634467 ECM2O94769 699 aaPredicted RBP8.6□□□□□ -1.03
AC055839.1-201ENST00000634467 GSE1Q14687 1217 aa8.6□□□□□ -1.03
AC055839.1-201ENST00000634467 FAM212AQ96EL1 285 aa8.6□□□□□ -1.03
AC055839.1-201ENST00000634467 TSPYL2Q9H2G4 693 aaPredicted RBP8.58□□□□□ -1.04
AC055839.1-201ENST00000634467 RGL2O15211 777 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms