RNA–Protein interactions for RNA: ENST00000634386.1

CD55-210, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 951 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-210ENST00000634386 AEBP2Q6ZN18 517 aaPredicted RBP30.56■■■□□ 2.48
CD55-210ENST00000634386 CHIC1Q5VXU3 224 aa29.66■■■□□ 2.34
CD55-210ENST00000634386 PHF23Q9BUL5 403 aaPredicted RBP26.04■■□□□ 1.76
CD55-210ENST00000634386 SENP3Q9H4L4 574 aaPredicted RBP26■■□□□ 1.75
CD55-210ENST00000634386 FOXD1Q16676 465 aa24.13■■□□□ 1.45
CD55-210ENST00000634386 PLPPR3Q6T4P5 718 aa24■■□□□ 1.43
CD55-210ENST00000634386 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
CD55-210ENST00000634386 ADRA2BP18089 450 aa23.02■■□□□ 1.28
CD55-210ENST00000634386 PIAS4Q8N2W9 510 aaPredicted RBP22.72■■□□□ 1.23
CD55-210ENST00000634386 MSH5O43196 834 aa22.37■■□□□ 1.17
CD55-210ENST00000634386 POTEDQ86YR6 584 aa21.47■■□□□ 1.03
CD55-210ENST00000634386 PPP4R3CPQ6ZMV5 832 aa21.11■□□□□ 0.97
CD55-210ENST00000634386 SCAF1Q9H7N4 1312 aaKnown RBP21.1■□□□□ 0.97
CD55-210ENST00000634386 MAPK8IP2Q13387 824 aaPredicted RBP20.94■□□□□ 0.94
CD55-210ENST00000634386 DMRT2Q9Y5R5 561 aa20.71■□□□□ 0.91
CD55-210ENST00000634386 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
CD55-210ENST00000634386 NCBP3Q53F19 620 aaKnown RBP20.51■□□□□ 0.87
CD55-210ENST00000634386 KCNA4P22459 653 aa20.37■□□□□ 0.85
CD55-210ENST00000634386 RNF216Q9NWF9 866 aaPredicted RBP20.22■□□□□ 0.83
CD55-210ENST00000634386 NPM3O75607 178 aaKnown RBP20.19■□□□□ 0.82
CD55-210ENST00000634386 HOXD11P31277 338 aaPredicted RBP20.19■□□□□ 0.82
CD55-210ENST00000634386 DCAF8L1A6NGE4 600 aa19.83■□□□□ 0.77
CD55-210ENST00000634386 DNAJC5BQ9UF47 199 aa19.64■□□□□ 0.73
CD55-210ENST00000634386 SLC4A1APQ9BWU0 796 aaKnown RBP19.37■□□□□ 0.69
CD55-210ENST00000634386 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.25■□□□□ 0.67
CD55-210ENST00000634386 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
CD55-210ENST00000634386 SLC4A2P04920 1241 aa19.11■□□□□ 0.65
CD55-210ENST00000634386 U3KPZ7 1027 aaPredicted RBP18.91■□□□□ 0.62
CD55-210ENST00000634386 C1QBPQ07021 282 aaKnown RBP18.9■□□□□ 0.62
CD55-210ENST00000634386 FOXD4L1Q9NU39 408 aa18.83■□□□□ 0.6
CD55-210ENST00000634386 CACNB1Q02641 598 aaPredicted RBP18.8■□□□□ 0.6
CD55-210ENST00000634386 ZBTB22O15209 634 aa18.72■□□□□ 0.59
CD55-210ENST00000634386 MYCNP04198 464 aaPredicted RBP18.68■□□□□ 0.58
CD55-210ENST00000634386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.62■□□□□ 0.57
CD55-210ENST00000634386 HNRNPUL2Q1KMD3 747 aaKnown RBP18.62■□□□□ 0.57
CD55-210ENST00000634386 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
CD55-210ENST00000634386 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
CD55-210ENST00000634386 APLP2Q06481 763 aa18.48■□□□□ 0.55
CD55-210ENST00000634386 CSRNP3Q8WYN3 585 aa18.45■□□□□ 0.54
CD55-210ENST00000634386 SPINK5Q9NQ38 1064 aaPredicted RBP18.44■□□□□ 0.54
CD55-210ENST00000634386 CAPN15O75808 1086 aa18.39■□□□□ 0.53
CD55-210ENST00000634386 TRHP20396 242 aaPredicted RBP18.26■□□□□ 0.51
CD55-210ENST00000634386 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
CD55-210ENST00000634386 ATXN8OSP0DMR3 200 aa18.19■□□□□ 0.5
CD55-210ENST00000634386 ATF5Q9Y2D1 282 aaPredicted RBP18.17■□□□□ 0.5
CD55-210ENST00000634386 DSG3P32926 999 aa18.13■□□□□ 0.49
CD55-210ENST00000634386 ABCB7O75027 752 aa18.01■□□□□ 0.47
CD55-210ENST00000634386 POLA2Q14181 598 aa17.9■□□□□ 0.46
CD55-210ENST00000634386 ZBTB12Q9Y330 459 aaPredicted RBP17.61■□□□□ 0.41
CD55-210ENST00000634386 FBLN2P98095 1184 aa17.45■□□□□ 0.38
CD55-210ENST00000634386 MKRN4PQ13434 485 aaPredicted RBP17.37■□□□□ 0.37
CD55-210ENST00000634386 RBM42Q9BTD8 480 aaKnown RBP17.31■□□□□ 0.36
CD55-210ENST00000634386 OSCARQ8IYS5 282 aa17.3■□□□□ 0.36
CD55-210ENST00000634386 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
CD55-210ENST00000634386 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
CD55-210ENST00000634386 SPDYE2Q495Y8 402 aa17.11■□□□□ 0.33
CD55-210ENST00000634386 AKT1S1Q96B36 256 aa17.04■□□□□ 0.32
CD55-210ENST00000634386 ZNF692Q9BU19 519 aaPredicted RBP17.01■□□□□ 0.31
CD55-210ENST00000634386 SSUH2Q9Y2M2 353 aa16.94■□□□□ 0.3
CD55-210ENST00000634386 SPDYE4A6NLX3 237 aa16.89■□□□□ 0.29
CD55-210ENST00000634386 REM2Q8IYK8 340 aaPredicted RBP16.86■□□□□ 0.29
CD55-210ENST00000634386 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
CD55-210ENST00000634386 POTEHQ6S545 545 aa16.72■□□□□ 0.27
CD55-210ENST00000634386 FKBP8Q14318 412 aa16.71■□□□□ 0.27
CD55-210ENST00000634386 PITPNM1O00562 1244 aa16.66■□□□□ 0.26
CD55-210ENST00000634386 SPDYE1Q8NFV5 336 aaPredicted RBP16.66■□□□□ 0.26
CD55-210ENST00000634386 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
CD55-210ENST00000634386 CLEC11AQ9Y240 323 aa16.6■□□□□ 0.25
CD55-210ENST00000634386 PROM2Q8N271 834 aa16.57■□□□□ 0.24
CD55-210ENST00000634386 STAG3Q9UJ98 1225 aa16.47■□□□□ 0.23
CD55-210ENST00000634386 PRR29P0C7W0 189 aa16.42■□□□□ 0.22
CD55-210ENST00000634386 FXR2P51116 673 aaKnown RBP eCLIP16.4■□□□□ 0.22
CD55-210ENST00000634386 PIP4P2Q8N4L2 257 aa16.38■□□□□ 0.21
CD55-210ENST00000634386 PRKAR2AP13861 404 aaKnown RBP16.25■□□□□ 0.19
CD55-210ENST00000634386 CHADLQ6NUI6 762 aa16.2■□□□□ 0.18
CD55-210ENST00000634386 FBXO3Q9UK99 471 aa16.19■□□□□ 0.18
CD55-210ENST00000634386 CREBZFQ9NS37 354 aa16.14■□□□□ 0.17
CD55-210ENST00000634386 MIER1Q8N108 512 aa16.05■□□□□ 0.16
CD55-210ENST00000634386 FARP1Q9Y4F1 1045 aaPredicted RBP16.03■□□□□ 0.16
CD55-210ENST00000634386 PLEKHG5O94827 1062 aa16.01■□□□□ 0.15
CD55-210ENST00000634386 PLCD3Q8N3E9 789 aa16.01■□□□□ 0.15
CD55-210ENST00000634386 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
CD55-210ENST00000634386 HAX1O00165 279 aa15.94■□□□□ 0.14
CD55-210ENST00000634386 MNX1P50219 401 aaPredicted RBP15.94■□□□□ 0.14
CD55-210ENST00000634386 NPM1P06748 294 aaKnown RBP eCLIP15.9■□□□□ 0.14
CD55-210ENST00000634386 ZBTB47Q9UFB7 747 aaPredicted RBP15.86■□□□□ 0.13
CD55-210ENST00000634386 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
CD55-210ENST00000634386 CD44P16070 742 aaKnown RBP15.78■□□□□ 0.12
CD55-210ENST00000634386 EVX2Q03828 476 aa15.75■□□□□ 0.11
CD55-210ENST00000634386 KLHL34Q8N239 644 aa15.75■□□□□ 0.11
CD55-210ENST00000634386 IFNLR1Q8IU57 520 aaPredicted RBP15.71■□□□□ 0.11
CD55-210ENST00000634386 PAK3O75914 559 aaPredicted RBP15.69■□□□□ 0.1
CD55-210ENST00000634386 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
CD55-210ENST00000634386 NUBP1P53384 320 aa15.65■□□□□ 0.1
CD55-210ENST00000634386 SP7Q8TDD2 431 aaPredicted RBP15.65■□□□□ 0.1
CD55-210ENST00000634386 RASEFQ8IZ41 740 aa15.63■□□□□ 0.09
CD55-210ENST00000634386 TSPYL2Q9H2G4 693 aaPredicted RBP15.62■□□□□ 0.09
CD55-210ENST00000634386 SPOCK2Q92563 424 aa15.58■□□□□ 0.08
CD55-210ENST00000634386 ZNF579Q8NAF0 562 aaKnown RBP15.56■□□□□ 0.08
CD55-210ENST00000634386 FAM212AQ96EL1 285 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms