RNA–Protein interactions for RNA: ENST00000633813.1

LINC00254-202, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 439 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-202ENST00000633813 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
LINC00254-202ENST00000633813 CHIC1Q5VXU3 224 aa25.93■■□□□ 1.74
LINC00254-202ENST00000633813 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
LINC00254-202ENST00000633813 SENP3Q9H4L4 574 aaPredicted RBP22.62■■□□□ 1.21
LINC00254-202ENST00000633813 PLPPR3Q6T4P5 718 aa21.11■□□□□ 0.97
LINC00254-202ENST00000633813 FOXD1Q16676 465 aa20.91■□□□□ 0.94
LINC00254-202ENST00000633813 ADRA2BP18089 450 aa20.07■□□□□ 0.8
LINC00254-202ENST00000633813 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
LINC00254-202ENST00000633813 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
LINC00254-202ENST00000633813 MSH5O43196 834 aa19.4■□□□□ 0.7
LINC00254-202ENST00000633813 PPP4R3CPQ6ZMV5 832 aa18.55■□□□□ 0.56
LINC00254-202ENST00000633813 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
LINC00254-202ENST00000633813 MAPK8IP2Q13387 824 aaPredicted RBP18.19■□□□□ 0.5
LINC00254-202ENST00000633813 NCBP3Q53F19 620 aaKnown RBP18.14■□□□□ 0.49
LINC00254-202ENST00000633813 CNKSR2Q8WXI2 1034 aa18.08■□□□□ 0.48
LINC00254-202ENST00000633813 KCNA4P22459 653 aa18.05■□□□□ 0.48
LINC00254-202ENST00000633813 DMRT2Q9Y5R5 561 aa18.01■□□□□ 0.47
LINC00254-202ENST00000633813 NPM3O75607 178 aaKnown RBP17.77■□□□□ 0.44
LINC00254-202ENST00000633813 RNF216Q9NWF9 866 aaPredicted RBP17.72■□□□□ 0.43
LINC00254-202ENST00000633813 POTEDQ86YR6 584 aa17.63■□□□□ 0.41
LINC00254-202ENST00000633813 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
LINC00254-202ENST00000633813 DNAJC5BQ9UF47 199 aa17.3■□□□□ 0.36
LINC00254-202ENST00000633813 DCAF8L1A6NGE4 600 aa17.28■□□□□ 0.36
LINC00254-202ENST00000633813 SLC4A1APQ9BWU0 796 aaKnown RBP17.24■□□□□ 0.35
LINC00254-202ENST00000633813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
LINC00254-202ENST00000633813 SLC4A2P04920 1241 aa16.75■□□□□ 0.27
LINC00254-202ENST00000633813 FOXD4L1Q9NU39 408 aa16.69■□□□□ 0.26
LINC00254-202ENST00000633813 EHMT2Q96KQ7 1210 aa16.68■□□□□ 0.26
LINC00254-202ENST00000633813 ZBTB22O15209 634 aa16.55■□□□□ 0.24
LINC00254-202ENST00000633813 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
LINC00254-202ENST00000633813 U3KPZ7 1027 aaPredicted RBP16.5■□□□□ 0.23
LINC00254-202ENST00000633813 MYCNP04198 464 aaPredicted RBP16.49■□□□□ 0.23
LINC00254-202ENST00000633813 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
LINC00254-202ENST00000633813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.42■□□□□ 0.22
LINC00254-202ENST00000633813 HNRNPUL2Q1KMD3 747 aaKnown RBP16.42■□□□□ 0.22
LINC00254-202ENST00000633813 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
LINC00254-202ENST00000633813 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
LINC00254-202ENST00000633813 APLP2Q06481 763 aa16.29■□□□□ 0.2
LINC00254-202ENST00000633813 CACNB1Q02641 598 aaPredicted RBP16.19■□□□□ 0.18
LINC00254-202ENST00000633813 ATXN8OSP0DMR3 200 aa16.13■□□□□ 0.17
LINC00254-202ENST00000633813 CAPN15O75808 1086 aa16.05■□□□□ 0.16
LINC00254-202ENST00000633813 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
LINC00254-202ENST00000633813 ZNF219Q9P2Y4 722 aaPredicted RBP16■□□□□ 0.15
LINC00254-202ENST00000633813 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
LINC00254-202ENST00000633813 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
LINC00254-202ENST00000633813 DSG3P32926 999 aa15.74■□□□□ 0.11
LINC00254-202ENST00000633813 ABCB7O75027 752 aa15.69■□□□□ 0.1
LINC00254-202ENST00000633813 POLA2Q14181 598 aa15.67■□□□□ 0.1
LINC00254-202ENST00000633813 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
LINC00254-202ENST00000633813 FBLN2P98095 1184 aa15.42■□□□□ 0.06
LINC00254-202ENST00000633813 MKRN4PQ13434 485 aaPredicted RBP15.25■□□□□ 0.03
LINC00254-202ENST00000633813 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
LINC00254-202ENST00000633813 RBM42Q9BTD8 480 aaKnown RBP15.1■□□□□ 0.01
LINC00254-202ENST00000633813 SPDYE2BA6NHP3 402 aa15.05■□□□□ -0
LINC00254-202ENST00000633813 SPDYE6P0CI01 402 aa15.05■□□□□ -0
LINC00254-202ENST00000633813 SPDYE2Q495Y8 402 aa15.05■□□□□ -0
LINC00254-202ENST00000633813 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
LINC00254-202ENST00000633813 ZNF692Q9BU19 519 aaPredicted RBP14.97□□□□□ -0.01
LINC00254-202ENST00000633813 FKBP8Q14318 412 aa14.95□□□□□ -0.02
LINC00254-202ENST00000633813 AKT1S1Q96B36 256 aa14.87□□□□□ -0.03
LINC00254-202ENST00000633813 SSUH2Q9Y2M2 353 aa14.87□□□□□ -0.03
LINC00254-202ENST00000633813 PABPN1Q86U42 306 aaKnown RBP eCLIP14.74□□□□□ -0.05
LINC00254-202ENST00000633813 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
LINC00254-202ENST00000633813 PROM2Q8N271 834 aa14.68□□□□□ -0.06
LINC00254-202ENST00000633813 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
LINC00254-202ENST00000633813 STAG3Q9UJ98 1225 aa14.58□□□□□ -0.08
LINC00254-202ENST00000633813 CLEC11AQ9Y240 323 aa14.53□□□□□ -0.08
LINC00254-202ENST00000633813 PITPNM1O00562 1244 aa14.51□□□□□ -0.09
LINC00254-202ENST00000633813 FBXO3Q9UK99 471 aa14.51□□□□□ -0.09
LINC00254-202ENST00000633813 PRR29P0C7W0 189 aa14.41□□□□□ -0.1
LINC00254-202ENST00000633813 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
LINC00254-202ENST00000633813 PLEKHG5O94827 1062 aa14.26□□□□□ -0.13
LINC00254-202ENST00000633813 VASPP50552 380 aaPredicted RBP14.24□□□□□ -0.13
LINC00254-202ENST00000633813 FXR2P51116 673 aaKnown RBP eCLIP14.24□□□□□ -0.13
LINC00254-202ENST00000633813 PLCD3Q8N3E9 789 aa14.23□□□□□ -0.13
LINC00254-202ENST00000633813 MIER1Q8N108 512 aa14.22□□□□□ -0.13
LINC00254-202ENST00000633813 PIP4P2Q8N4L2 257 aa14.2□□□□□ -0.14
LINC00254-202ENST00000633813 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
LINC00254-202ENST00000633813 CREBZFQ9NS37 354 aa14.15□□□□□ -0.14
LINC00254-202ENST00000633813 ZBTB47Q9UFB7 747 aaPredicted RBP14.13□□□□□ -0.15
LINC00254-202ENST00000633813 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
LINC00254-202ENST00000633813 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
LINC00254-202ENST00000633813 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
LINC00254-202ENST00000633813 FARP1Q9Y4F1 1045 aaPredicted RBP14.02□□□□□ -0.17
LINC00254-202ENST00000633813 IFNLR1Q8IU57 520 aaPredicted RBP14□□□□□ -0.17
LINC00254-202ENST00000633813 POTEHQ6S545 545 aa13.99□□□□□ -0.17
LINC00254-202ENST00000633813 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
LINC00254-202ENST00000633813 SPOCK2Q92563 424 aa13.9□□□□□ -0.18
LINC00254-202ENST00000633813 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
LINC00254-202ENST00000633813 NUBP1P53384 320 aa13.8□□□□□ -0.2
LINC00254-202ENST00000633813 HAX1O00165 279 aa13.79□□□□□ -0.2
LINC00254-202ENST00000633813 FAM212AQ96EL1 285 aa13.79□□□□□ -0.2
LINC00254-202ENST00000633813 CD44P16070 742 aaKnown RBP13.77□□□□□ -0.21
LINC00254-202ENST00000633813 C19orf67A6NJJ6 358 aa13.76□□□□□ -0.21
LINC00254-202ENST00000633813 RASEFQ8IZ41 740 aa13.75□□□□□ -0.21
LINC00254-202ENST00000633813 GSE1Q14687 1217 aa13.74□□□□□ -0.21
LINC00254-202ENST00000633813 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
LINC00254-202ENST00000633813 TSPYL2Q9H2G4 693 aaPredicted RBP13.72□□□□□ -0.21
LINC00254-202ENST00000633813 CIZ1Q9ULV3 898 aaPredicted RBP13.69□□□□□ -0.22
LINC00254-202ENST00000633813 ZRANB1Q9UGI0 708 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms