RNA–Protein interactions for RNA: ENST00000631357.2

CHTF18-220, Transcript of chromosome transmission fidelity factor 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHTF18, Length 3,555 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-220ENST00000631357 NISCHQ9Y2I1 1504 aa34.28■■■■□ 3.08
CHTF18-220ENST00000631357 SHROOM4Q9ULL8 1493 aa29.86■■■□□ 2.37
CHTF18-220ENST00000631357 DCAF8L2P0C7V8 631 aa29.38■■■□□ 2.29
CHTF18-220ENST00000631357 SUPT5HO00267 1087 aaKnown RBP29.17■■■□□ 2.26
CHTF18-220ENST00000631357 ZCCHC6Q5VYS8 1495 aaKnown RBP28.89■■■□□ 2.22
CHTF18-220ENST00000631357 CCDC180Q9P1Z9 1646 aa28.87■■■□□ 2.21
CHTF18-220ENST00000631357 CHIC1Q5VXU3 224 aa27.94■■■□□ 2.06
CHTF18-220ENST00000631357 MYO15BQ96JP2 1530 aa27.8■■■□□ 2.04
CHTF18-220ENST00000631357 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
CHTF18-220ENST00000631357 ABCC9O60706 1549 aa27.68■■■□□ 2.02
CHTF18-220ENST00000631357 SCRIBQ14160 1630 aa27.61■■■□□ 2.01
CHTF18-220ENST00000631357 LOC105371045A0A1W2PR82 267 aa27.42■■□□□ 1.98
CHTF18-220ENST00000631357 RSF1Q96T23 1441 aaPredicted RBP27.21■■□□□ 1.95
CHTF18-220ENST00000631357 EHMT2Q96KQ7 1210 aa27.17■■□□□ 1.94
CHTF18-220ENST00000631357 PCGF6Q9BYE7 350 aa27.14■■□□□ 1.93
CHTF18-220ENST00000631357 FAM9AQ8IZU1 332 aaPredicted RBP27.1■■□□□ 1.93
CHTF18-220ENST00000631357 CECR2Q9BXF3 1484 aa27.06■■□□□ 1.92
CHTF18-220ENST00000631357 TRIM41Q8WV44 630 aa26.94■■□□□ 1.9
CHTF18-220ENST00000631357 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
CHTF18-220ENST00000631357 NACADO15069 1562 aa26.89■■□□□ 1.9
CHTF18-220ENST00000631357 MROH2BQ7Z745 1585 aa26.82■■□□□ 1.88
CHTF18-220ENST00000631357 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.867e-7■■■■■ 33
CHTF18-220ENST00000631357 HRCP23327 699 aa26.68■■□□□ 1.86
CHTF18-220ENST00000631357 WIZO95785 1651 aa26.66■■□□□ 1.86
CHTF18-220ENST00000631357 PPARGC1BQ86YN6 1023 aaKnown RBP26.62■■□□□ 1.85
CHTF18-220ENST00000631357 TRIM26Q12899 539 aaPredicted RBP26.31■■□□□ 1.8
CHTF18-220ENST00000631357 BAZ1AQ9NRL2 1556 aaPredicted RBP26.27■■□□□ 1.8
CHTF18-220ENST00000631357 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.78
CHTF18-220ENST00000631357 TTBK1Q5TCY1 1321 aaPredicted RBP26.17■■□□□ 1.78
CHTF18-220ENST00000631357 ABCC8Q09428 1581 aa26.14■■□□□ 1.78
CHTF18-220ENST00000631357 CCDC88BA6NC98 1476 aa26.12■■□□□ 1.77
CHTF18-220ENST00000631357 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
CHTF18-220ENST00000631357 TOP2AP11388 1531 aaKnown RBP26.01■■□□□ 1.75
CHTF18-220ENST00000631357 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
CHTF18-220ENST00000631357 SMARCA2P51531 1590 aa25.95■■□□□ 1.74
CHTF18-220ENST00000631357 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
CHTF18-220ENST00000631357 SOGA1O94964 1423 aa25.89■■□□□ 1.74
CHTF18-220ENST00000631357 RUSC2Q8N2Y8 1516 aa25.82■■□□□ 1.72
CHTF18-220ENST00000631357 UBTFP17480 764 aaKnown RBP25.8■■□□□ 1.72
CHTF18-220ENST00000631357 RANGAP1P46060 587 aaPredicted RBP25.76■■□□□ 1.71
CHTF18-220ENST00000631357 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.67■■□□□ 1.7
CHTF18-220ENST00000631357 CSRNP3Q8WYN3 585 aa25.67■■□□□ 1.7
CHTF18-220ENST00000631357 ATAD2BQ9ULI0 1458 aa25.6■■□□□ 1.69
CHTF18-220ENST00000631357 WRNQ14191 1432 aaPredicted RBP eCLIP25.58■■□□□ 1.68
CHTF18-220ENST00000631357 BAZ1BQ9UIG0 1483 aaKnown RBP25.57■■□□□ 1.68
CHTF18-220ENST00000631357 CEP162Q5TB80 1403 aa25.56■■□□□ 1.68
CHTF18-220ENST00000631357 CCER1Q8TC90 406 aaPredicted RBP25.47■■□□□ 1.67
CHTF18-220ENST00000631357 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
CHTF18-220ENST00000631357 ZEB1P37275 1124 aaPredicted RBP25.43■■□□□ 1.66
CHTF18-220ENST00000631357 PEG3Q9GZU2 1588 aa25.38■■□□□ 1.65
CHTF18-220ENST00000631357 TNIKQ9UKE5 1360 aa25.38■■□□□ 1.65
CHTF18-220ENST00000631357 GOLGA3Q08378 1498 aa25.28■■□□□ 1.64
CHTF18-220ENST00000631357 EEA1Q15075 1411 aa25.24■■□□□ 1.63
CHTF18-220ENST00000631357 HNRNPUL2Q1KMD3 747 aaKnown RBP25.23■■□□□ 1.63
CHTF18-220ENST00000631357 RAPGEF2Q9Y4G8 1499 aa25.19■■□□□ 1.62
CHTF18-220ENST00000631357 CLIP1P30622 1438 aa25.13■■□□□ 1.61
CHTF18-220ENST00000631357 CEP164Q9UPV0 1460 aa25.12■■□□□ 1.61
CHTF18-220ENST00000631357 APLP2Q06481 763 aa25.04■■□□□ 1.6
CHTF18-220ENST00000631357 NCAPD3P42695 1498 aa25.01■■□□□ 1.59
CHTF18-220ENST00000631357 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
CHTF18-220ENST00000631357 CUX1P39880 1505 aa24.93■■□□□ 1.58
CHTF18-220ENST00000631357 KIF21BO75037 1637 aa24.92■■□□□ 1.58
CHTF18-220ENST00000631357 VPS8Q8N3P4 1428 aa24.87■■□□□ 1.57
CHTF18-220ENST00000631357 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
CHTF18-220ENST00000631357 KANK4Q5T7N3 995 aaPredicted RBP24.84■■□□□ 1.57
CHTF18-220ENST00000631357 CFTRP13569 1480 aa24.81■■□□□ 1.56
CHTF18-220ENST00000631357 ITGAEP38570 1179 aa24.77■■□□□ 1.56
CHTF18-220ENST00000631357 KIF27Q86VH2 1401 aa24.76■■□□□ 1.55
CHTF18-220ENST00000631357 DIEXFQ68CQ4 756 aaKnown RBP24.76■■□□□ 1.55
CHTF18-220ENST00000631357 BIVM-ERCC5R4GMW8 1640 aa24.75■■□□□ 1.55
CHTF18-220ENST00000631357 P3H3Q8IVL6 736 aa24.74■■□□□ 1.55
CHTF18-220ENST00000631357 PRXQ9BXM0 1461 aa24.74■■□□□ 1.55
CHTF18-220ENST00000631357 CUX2O14529 1486 aa24.71■■□□□ 1.55
CHTF18-220ENST00000631357 DNAJC5BQ9UF47 199 aa24.69■■□□□ 1.54
CHTF18-220ENST00000631357 CADPSQ9ULU8 1353 aa24.68■■□□□ 1.54
CHTF18-220ENST00000631357 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
CHTF18-220ENST00000631357 ARAP1Q96P48 1450 aa24.68■■□□□ 1.54
CHTF18-220ENST00000631357 CC2D2AQ9P2K1 1620 aa24.64■■□□□ 1.53
CHTF18-220ENST00000631357 SCAF1Q9H7N4 1312 aaKnown RBP24.61■■□□□ 1.53
CHTF18-220ENST00000631357 NESP48681 1621 aa24.59■■□□□ 1.53
CHTF18-220ENST00000631357 IGF1RP08069 1367 aa24.59■■□□□ 1.53
CHTF18-220ENST00000631357 FGD5Q6ZNL6 1462 aa24.57■■□□□ 1.52
CHTF18-220ENST00000631357 ERICH3Q5RHP9 1530 aa24.54■■□□□ 1.52
CHTF18-220ENST00000631357 ZNF316A6NFI3 1004 aaPredicted RBP24.53■■□□□ 1.52
CHTF18-220ENST00000631357 YTHDC1Q96MU7 727 aaKnown RBP24.52■■□□□ 1.52
CHTF18-220ENST00000631357 CARMIL1Q5VZK9 1371 aa24.51■■□□□ 1.51
CHTF18-220ENST00000631357 RAD54L2Q9Y4B4 1467 aa24.51■■□□□ 1.51
CHTF18-220ENST00000631357 ARHGAP35Q9NRY4 1499 aa24.51■■□□□ 1.51
CHTF18-220ENST00000631357 NEUROD1Q13562 356 aa24.49■■□□□ 1.51
CHTF18-220ENST00000631357 FANCD2Q9BXW9 1451 aa24.48■■□□□ 1.51
CHTF18-220ENST00000631357 MIER1Q8N108 512 aa24.35■■□□□ 1.49
CHTF18-220ENST00000631357 FAM50AQ14320 339 aaKnown RBP24.34■■□□□ 1.49
CHTF18-220ENST00000631357 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
CHTF18-220ENST00000631357 TDRD9Q8NDG6 1382 aaKnown RBP24.31■■□□□ 1.48
CHTF18-220ENST00000631357 DHX57Q6P158 1386 aaKnown RBP24.3■■□□□ 1.48
CHTF18-220ENST00000631357 CCNB3Q8WWL7 1395 aa24.28■■□□□ 1.48
CHTF18-220ENST00000631357 FHOD3Q2V2M9 1422 aa24.28■■□□□ 1.48
CHTF18-220ENST00000631357 POLA1P09884 1462 aaPredicted RBP24.27■■□□□ 1.48
CHTF18-220ENST00000631357 TOPBP1Q92547 1522 aa24.25■■□□□ 1.47
CHTF18-220ENST00000631357 PRDM2Q13029 1718 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms