RNA–Protein interactions for RNA: ENST00000629520.2

ZEB2-229, Transcript of zinc finger E-box binding homeobox 2, humanhuman

TSL 2 BASIC

Gene ZEB2, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB2-229ENST00000629520 NISCHQ9Y2I1 1504 aa21.67■■□□□ 1.06
ZEB2-229ENST00000629520 CCDC180Q9P1Z9 1646 aa18.71■□□□□ 0.59
ZEB2-229ENST00000629520 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
ZEB2-229ENST00000629520 DCAF8L2P0C7V8 631 aa18.15■□□□□ 0.5
ZEB2-229ENST00000629520 SHROOM4Q9ULL8 1493 aa18.01■□□□□ 0.47
ZEB2-229ENST00000629520 DCAF1Q9Y4B6 1507 aa17.81■□□□□ 0.44
ZEB2-229ENST00000629520 ABCC9O60706 1549 aa17.8■□□□□ 0.44
ZEB2-229ENST00000629520 MYO15BQ96JP2 1530 aa17.53■□□□□ 0.4
ZEB2-229ENST00000629520 NACADO15069 1562 aa17.45■□□□□ 0.38
ZEB2-229ENST00000629520 SUPT5HO00267 1087 aaKnown RBP17.42■□□□□ 0.38
ZEB2-229ENST00000629520 SCRIBQ14160 1630 aa17.4■□□□□ 0.38
ZEB2-229ENST00000629520 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ZEB2-229ENST00000629520 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
ZEB2-229ENST00000629520 RSF1Q96T23 1441 aaPredicted RBP16.91■□□□□ 0.3
ZEB2-229ENST00000629520 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
ZEB2-229ENST00000629520 PABPN1Q86U42 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
ZEB2-229ENST00000629520 MROH2BQ7Z745 1585 aa16.79■□□□□ 0.28
ZEB2-229ENST00000629520 BICRAQ9NZM4 1560 aa16.78■□□□□ 0.28
ZEB2-229ENST00000629520 BAZ1AQ9NRL2 1556 aaPredicted RBP16.71■□□□□ 0.27
ZEB2-229ENST00000629520 WIZO95785 1651 aa16.66■□□□□ 0.26
ZEB2-229ENST00000629520 CHIC1Q5VXU3 224 aa16.64■□□□□ 0.25
ZEB2-229ENST00000629520 SMARCA4P51532 1647 aa16.61■□□□□ 0.25
ZEB2-229ENST00000629520 TOP2AP11388 1531 aaKnown RBP16.43■□□□□ 0.22
ZEB2-229ENST00000629520 ATAD2BQ9ULI0 1458 aa16.34■□□□□ 0.21
ZEB2-229ENST00000629520 PEG3Q9GZU2 1588 aa16.34■□□□□ 0.21
ZEB2-229ENST00000629520 CCDC88BA6NC98 1476 aa16.34■□□□□ 0.21
ZEB2-229ENST00000629520 TRIM41Q8WV44 630 aa16.3■□□□□ 0.2
ZEB2-229ENST00000629520 SMARCA2P51531 1590 aa16.3■□□□□ 0.2
ZEB2-229ENST00000629520 EIF4G1Q04637 1599 aaKnown RBP16.29■□□□□ 0.2
ZEB2-229ENST00000629520 BAZ1BQ9UIG0 1483 aaKnown RBP16.28■□□□□ 0.2
ZEB2-229ENST00000629520 NCAPD3P42695 1498 aa16.15■□□□□ 0.18
ZEB2-229ENST00000629520 LOC105371045A0A1W2PR82 267 aa16.11■□□□□ 0.17
ZEB2-229ENST00000629520 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
ZEB2-229ENST00000629520 HMGXB3Q12766 1538 aa16.09■□□□□ 0.17
ZEB2-229ENST00000629520 ABCC8Q09428 1581 aa16.08■□□□□ 0.16
ZEB2-229ENST00000629520 CC2D2AQ9P2K1 1620 aa16.03■□□□□ 0.16
ZEB2-229ENST00000629520 EHMT2Q96KQ7 1210 aa15.96■□□□□ 0.15
ZEB2-229ENST00000629520 WRNQ14191 1432 aaPredicted RBP eCLIP15.93■□□□□ 0.14
ZEB2-229ENST00000629520 CFTRP13569 1480 aa15.84■□□□□ 0.13
ZEB2-229ENST00000629520 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
ZEB2-229ENST00000629520 SOGA1O94964 1423 aa15.82■□□□□ 0.12
ZEB2-229ENST00000629520 CADPSQ9ULU8 1353 aa15.8■□□□□ 0.12
ZEB2-229ENST00000629520 RUSC2Q8N2Y8 1516 aa15.76■□□□□ 0.11
ZEB2-229ENST00000629520 DNAJC5BQ9UF47 199 aa15.75■□□□□ 0.11
ZEB2-229ENST00000629520 CSRNP3Q8WYN3 585 aa15.73■□□□□ 0.11
ZEB2-229ENST00000629520 TOP2BQ02880 1626 aa15.71■□□□□ 0.1
ZEB2-229ENST00000629520 EEA1Q15075 1411 aa15.7■□□□□ 0.1
ZEB2-229ENST00000629520 CUX1P39880 1505 aa15.68■□□□□ 0.1
ZEB2-229ENST00000629520 NESP48681 1621 aa15.66■□□□□ 0.1
ZEB2-229ENST00000629520 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
ZEB2-229ENST00000629520 BIVM-ERCC5R4GMW8 1640 aa15.65■□□□□ 0.1
ZEB2-229ENST00000629520 FANCD2Q9BXW9 1451 aa15.63■□□□□ 0.09
ZEB2-229ENST00000629520 UBTFP17480 764 aaKnown RBP15.62■□□□□ 0.09
ZEB2-229ENST00000629520 LAMC3Q9Y6N6 1575 aa15.55■□□□□ 0.08
ZEB2-229ENST00000629520 GOLGA3Q08378 1498 aa15.54■□□□□ 0.08
ZEB2-229ENST00000629520 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
ZEB2-229ENST00000629520 TNIKQ9UKE5 1360 aa15.52■□□□□ 0.08
ZEB2-229ENST00000629520 CEP164Q9UPV0 1460 aa15.52■□□□□ 0.07
ZEB2-229ENST00000629520 FGD5Q6ZNL6 1462 aa15.5■□□□□ 0.07
ZEB2-229ENST00000629520 KIF27Q86VH2 1401 aa15.5■□□□□ 0.07
ZEB2-229ENST00000629520 CEP162Q5TB80 1403 aa15.49■□□□□ 0.07
ZEB2-229ENST00000629520 PDS5BQ9NTI5 1447 aa15.49■□□□□ 0.07
ZEB2-229ENST00000629520 RAPGEF2Q9Y4G8 1499 aa15.47■□□□□ 0.07
ZEB2-229ENST00000629520 KIF21BO75037 1637 aa15.47■□□□□ 0.07
ZEB2-229ENST00000629520 CUX2O14529 1486 aa15.46■□□□□ 0.07
ZEB2-229ENST00000629520 TOPBP1Q92547 1522 aa15.45■□□□□ 0.06
ZEB2-229ENST00000629520 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
ZEB2-229ENST00000629520 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
ZEB2-229ENST00000629520 PPARGC1BQ86YN6 1023 aaKnown RBP15.42■□□□□ 0.06
ZEB2-229ENST00000629520 URB2Q14146 1524 aaKnown RBP15.41■□□□□ 0.06
ZEB2-229ENST00000629520 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
ZEB2-229ENST00000629520 POLA1P09884 1462 aaPredicted RBP15.4■□□□□ 0.06
ZEB2-229ENST00000629520 PRXQ9BXM0 1461 aa15.4■□□□□ 0.06
ZEB2-229ENST00000629520 TRIM26Q12899 539 aaPredicted RBP15.39■□□□□ 0.05
ZEB2-229ENST00000629520 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
ZEB2-229ENST00000629520 IGF1RP08069 1367 aa15.38■□□□□ 0.05
ZEB2-229ENST00000629520 ERICH3Q5RHP9 1530 aa15.35■□□□□ 0.05
ZEB2-229ENST00000629520 CLIP1P30622 1438 aa15.34■□□□□ 0.05
ZEB2-229ENST00000629520 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
ZEB2-229ENST00000629520 CARMIL1Q5VZK9 1371 aa15.31■□□□□ 0.04
ZEB2-229ENST00000629520 TTBK1Q5TCY1 1321 aaPredicted RBP15.29■□□□□ 0.04
ZEB2-229ENST00000629520 TDRD9Q8NDG6 1382 aaKnown RBP15.28■□□□□ 0.04
ZEB2-229ENST00000629520 MRC2Q9UBG0 1479 aa15.26■□□□□ 0.03
ZEB2-229ENST00000629520 ERCC6Q03468 1493 aa15.24■□□□□ 0.03
ZEB2-229ENST00000629520 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
ZEB2-229ENST00000629520 WDR97A6NE52 1622 aa15.19■□□□□ 0.02
ZEB2-229ENST00000629520 VPS8Q8N3P4 1428 aa15.19■□□□□ 0.02
ZEB2-229ENST00000629520 TARBP1Q13395 1621 aaKnown RBP15.17■□□□□ 0.02
ZEB2-229ENST00000629520 APLP2Q06481 763 aa15.16■□□□□ 0.02
ZEB2-229ENST00000629520 ABCA5Q8WWZ7 1642 aa15.16■□□□□ 0.02
ZEB2-229ENST00000629520 AQRO60306 1485 aaKnown RBP eCLIP15.14■□□□□ 0.01
ZEB2-229ENST00000629520 WDR62O43379 1518 aa15.14■□□□□ 0.01
ZEB2-229ENST00000629520 ARAP1Q96P48 1450 aa15.13■□□□□ 0.01
ZEB2-229ENST00000629520 CUL7Q14999 1698 aa15.13■□□□□ 0.01
ZEB2-229ENST00000629520 ARHGAP35Q9NRY4 1499 aa15.11■□□□□ 0.01
ZEB2-229ENST00000629520 HRCP23327 699 aa15.1■□□□□ 0.01
ZEB2-229ENST00000629520 IFT140Q96RY7 1462 aa15.09■□□□□ 0.01
ZEB2-229ENST00000629520 P3H3Q8IVL6 736 aa15.09■□□□□ 0.01
ZEB2-229ENST00000629520 ZNF608Q9ULD9 1512 aaPredicted RBP15.08■□□□□ 0
ZEB2-229ENST00000629520 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 6.2 ms