RNA–Protein interactions for RNA: ENST00000629520.2

ZEB2-229, Transcript of zinc finger E-box binding homeobox 2, human

TSL 2 BASIC

Gene ZEB2, Length 2,564 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB2-229	ENST00000629520	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.66	□□□□□ -0.7	2e-6	■■■■■ 88.8
ZEB2-229	ENST00000629520	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	10.27	□□□□□ -0.76	3e-6	■■■■■ 50.8
ZEB2-229	ENST00000629520	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.13	□□□□□ -0.79	1e-6	■■■■■ 39.3
ZEB2-229	ENST00000629520	TARDBP	Q13148	414 aa	Known RBP eCLIP	9.11	□□□□□ -0.95	1e-26	■■■■■ 35.5
ZEB2-229	ENST00000629520	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.31	□□□□□ -0.92	2e-6	■■■■□ 26.2
ZEB2-229	ENST00000629520	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.68	□□□□□ -0.7	7e-11	■■■■□ 24.7
ZEB2-229	ENST00000629520	HNRNPU	Q00839	825 aa	Known RBP eCLIP	13.36	□□□□□ -0.27	1e-7	■■■■□ 21.2
ZEB2-229	ENST00000629520	SF3B4	Q15427	424 aa	Known RBP eCLIP	8.45	□□□□□ -1.06	9e-10	■■■□□ 18.5
ZEB2-229	ENST00000629520	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	4e-6	■■■□□ 16.5
ZEB2-229	ENST00000629520	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	11.4	□□□□□ -0.58	7e-6	■■■□□ 16.3
ZEB2-229	ENST00000629520	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.26	□□□□□ -0.77	3e-7	■■■□□ 15.7
ZEB2-229	ENST00000629520	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	8.69	□□□□□ -1.02	5e-7	■■■□□ 15.6
ZEB2-229	ENST00000629520	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	10.22	□□□□□ -0.77	2e-6	■■■□□ 15
ZEB2-229	ENST00000629520	EWSR1	Q01844	656 aa	Known RBP eCLIP	8.06	□□□□□ -1.12	1e-6	■■■□□ 14.8
ZEB2-229	ENST00000629520	NONO	Q15233	471 aa	Known RBP eCLIP	11.14	□□□□□ -0.63	7e-7	■■□□□ 14.3
ZEB2-229	ENST00000629520	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	10.17	□□□□□ -0.78	9e-7	■■□□□ 13.6
ZEB2-229	ENST00000629520	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	9.71	□□□□□ -0.86	2e-17	■■□□□ 12.7
ZEB2-229	ENST00000629520	SRSF1	Q07955	248 aa	Known RBP eCLIP	7.87	□□□□□ -1.15	9e-9	■■□□□ 11.9
ZEB2-229	ENST00000629520	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.82	□□□□□ -0.2	5e-20	■■□□□ 11.8
ZEB2-229	ENST00000629520	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	14.19	□□□□□ -0.14	1e-8	■■□□□ 11.6
ZEB2-229	ENST00000629520	PUM1	Q14671	1186 aa	Known RBP eCLIP	9.19	□□□□□ -0.94	2e-9	■□□□□ 10.7
ZEB2-229	ENST00000629520	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	14.51	□□□□□ -0.09	2e-6	■□□□□ 10.3
ZEB2-229	ENST00000629520	DDX6	P26196	483 aa	Known RBP eCLIP	9.81	□□□□□ -0.84	3e-8	■□□□□ 9.5
ZEB2-229	ENST00000629520	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.27	□□□□□ -0.61	7e-6	■□□□□ 8.1

Retrieved 24 of 24 RNA–protein pairs in 6.7 ms