RNA–Protein interactions for RNA: ENST00000629272.2

ATL2-217, Transcript of atlastin GTPase 2, humanhuman

TSL 5 BASIC

Gene ATL2, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL2-217ENST00000629272 AEBP2Q6ZN18 517 aaPredicted RBP27.17■■□□□ 1.94
ATL2-217ENST00000629272 CHIC1Q5VXU3 224 aa26.27■■□□□ 1.8
ATL2-217ENST00000629272 PHF23Q9BUL5 403 aaPredicted RBP23.17■■□□□ 1.3
ATL2-217ENST00000629272 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
ATL2-217ENST00000629272 FOXD1Q16676 465 aa21.39■■□□□ 1.01
ATL2-217ENST00000629272 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
ATL2-217ENST00000629272 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
ATL2-217ENST00000629272 ADRA2BP18089 450 aa20.35■□□□□ 0.85
ATL2-217ENST00000629272 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
ATL2-217ENST00000629272 MSH5O43196 834 aa19.68■□□□□ 0.74
ATL2-217ENST00000629272 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
ATL2-217ENST00000629272 PPP4R3CPQ6ZMV5 832 aa18.62■□□□□ 0.57
ATL2-217ENST00000629272 MAPK8IP2Q13387 824 aaPredicted RBP18.54■□□□□ 0.56
ATL2-217ENST00000629272 SCAF1Q9H7N4 1312 aaKnown RBP18.46■□□□□ 0.55
ATL2-217ENST00000629272 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
ATL2-217ENST00000629272 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
ATL2-217ENST00000629272 KCNA4P22459 653 aa18.01■□□□□ 0.47
ATL2-217ENST00000629272 NCBP3Q53F19 620 aaKnown RBP17.95■□□□□ 0.46
ATL2-217ENST00000629272 HOXD11P31277 338 aaPredicted RBP17.93■□□□□ 0.46
ATL2-217ENST00000629272 NPM3O75607 178 aaKnown RBP17.87■□□□□ 0.45
ATL2-217ENST00000629272 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
ATL2-217ENST00000629272 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
ATL2-217ENST00000629272 DCAF8L1A6NGE4 600 aa17.25■□□□□ 0.35
ATL2-217ENST00000629272 SLC4A1APQ9BWU0 796 aaKnown RBP17.01■□□□□ 0.31
ATL2-217ENST00000629272 SLC4A2P04920 1241 aa17■□□□□ 0.31
ATL2-217ENST00000629272 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
ATL2-217ENST00000629272 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.84■□□□□ 0.294e-8■□□□□ 9.1
ATL2-217ENST00000629272 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
ATL2-217ENST00000629272 CACNB1Q02641 598 aaPredicted RBP16.72■□□□□ 0.27
ATL2-217ENST00000629272 ZBTB22O15209 634 aa16.68■□□□□ 0.26
ATL2-217ENST00000629272 C1QBPQ07021 282 aaKnown RBP16.67■□□□□ 0.26
ATL2-217ENST00000629272 FOXD4L1Q9NU39 408 aa16.58■□□□□ 0.24
ATL2-217ENST00000629272 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
ATL2-217ENST00000629272 CSRNP3Q8WYN3 585 aa16.35■□□□□ 0.21
ATL2-217ENST00000629272 SPINK5Q9NQ38 1064 aaPredicted RBP16.3■□□□□ 0.2
ATL2-217ENST00000629272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.29■□□□□ 0.2
ATL2-217ENST00000629272 HNRNPUL2Q1KMD3 747 aaKnown RBP16.29■□□□□ 0.2
ATL2-217ENST00000629272 SAMD1Q6SPF0 538 aaPredicted RBP16.26■□□□□ 0.19
ATL2-217ENST00000629272 EHMT2Q96KQ7 1210 aa16.23■□□□□ 0.19
ATL2-217ENST00000629272 ATF5Q9Y2D1 282 aaPredicted RBP16.13■□□□□ 0.17
ATL2-217ENST00000629272 APLP2Q06481 763 aa16.1■□□□□ 0.17
ATL2-217ENST00000629272 CAPN15O75808 1086 aa16.07■□□□□ 0.16
ATL2-217ENST00000629272 ATXN8OSP0DMR3 200 aa16.06■□□□□ 0.16
ATL2-217ENST00000629272 DSG3P32926 999 aa16.05■□□□□ 0.16
ATL2-217ENST00000629272 ZNF219Q9P2Y4 722 aaPredicted RBP16.01■□□□□ 0.15
ATL2-217ENST00000629272 TRHP20396 242 aaPredicted RBP15.95■□□□□ 0.14
ATL2-217ENST00000629272 ABCB7O75027 752 aa15.81■□□□□ 0.12
ATL2-217ENST00000629272 POLA2Q14181 598 aa15.74■□□□□ 0.11
ATL2-217ENST00000629272 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
ATL2-217ENST00000629272 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
ATL2-217ENST00000629272 OSCARQ8IYS5 282 aa15.24■□□□□ 0.03
ATL2-217ENST00000629272 FBLN2P98095 1184 aa15.22■□□□□ 0.03
ATL2-217ENST00000629272 POTEHQ6S545 545 aa15.17■□□□□ 0.02
ATL2-217ENST00000629272 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
ATL2-217ENST00000629272 SPDYE2BA6NHP3 402 aa15.06■□□□□ 0
ATL2-217ENST00000629272 SPDYE6P0CI01 402 aa15.06■□□□□ 0
ATL2-217ENST00000629272 SPDYE2Q495Y8 402 aa15.06■□□□□ 0
ATL2-217ENST00000629272 SSUH2Q9Y2M2 353 aa15.03■□□□□ -0
ATL2-217ENST00000629272 AKT1S1Q96B36 256 aa15□□□□□ -0.01
ATL2-217ENST00000629272 ZNF692Q9BU19 519 aaPredicted RBP14.88□□□□□ -0.03
ATL2-217ENST00000629272 REM2Q8IYK8 340 aaPredicted RBP14.87□□□□□ -0.03
ATL2-217ENST00000629272 SPDYE4A6NLX3 237 aa14.83□□□□□ -0.04
ATL2-217ENST00000629272 PROM2Q8N271 834 aa14.81□□□□□ -0.04
ATL2-217ENST00000629272 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
ATL2-217ENST00000629272 PITPNM1O00562 1244 aa14.72□□□□□ -0.05
ATL2-217ENST00000629272 CHRDL2Q6WN34 429 aa14.67□□□□□ -0.06
ATL2-217ENST00000629272 FKBP8Q14318 412 aa14.63□□□□□ -0.07
ATL2-217ENST00000629272 SPDYE1Q8NFV5 336 aaPredicted RBP14.6□□□□□ -0.07
ATL2-217ENST00000629272 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
ATL2-217ENST00000629272 PIP4P2Q8N4L2 257 aa14.49□□□□□ -0.09
ATL2-217ENST00000629272 CLEC11AQ9Y240 323 aa14.45□□□□□ -0.1
ATL2-217ENST00000629272 STAG3Q9UJ98 1225 aa14.39□□□□□ -0.11
ATL2-217ENST00000629272 PRR29P0C7W0 189 aa14.34□□□□□ -0.11
ATL2-217ENST00000629272 CREBZFQ9NS37 354 aa14.28□□□□□ -0.12
ATL2-217ENST00000629272 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
ATL2-217ENST00000629272 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
ATL2-217ENST00000629272 MNX1P50219 401 aaPredicted RBP14.22□□□□□ -0.13
ATL2-217ENST00000629272 FBXO3Q9UK99 471 aa14.12□□□□□ -0.15
ATL2-217ENST00000629272 FARP1Q9Y4F1 1045 aaPredicted RBP14.12□□□□□ -0.15
ATL2-217ENST00000629272 C19orf67A6NJJ6 358 aa14.04□□□□□ -0.16
ATL2-217ENST00000629272 VASPP50552 380 aaPredicted RBP14.04□□□□□ -0.16
ATL2-217ENST00000629272 EVX2Q03828 476 aa14.01□□□□□ -0.17
ATL2-217ENST00000629272 MIER1Q8N108 512 aa13.98□□□□□ -0.17
ATL2-217ENST00000629272 SP7Q8TDD2 431 aaPredicted RBP13.97□□□□□ -0.17
ATL2-217ENST00000629272 PLCD3Q8N3E9 789 aa13.91□□□□□ -0.18
ATL2-217ENST00000629272 HAX1O00165 279 aa13.9□□□□□ -0.18
ATL2-217ENST00000629272 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
ATL2-217ENST00000629272 NUBP1P53384 320 aa13.86□□□□□ -0.19
ATL2-217ENST00000629272 NPM1P06748 294 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATL2-217ENST00000629272 CD44P16070 742 aaKnown RBP13.84□□□□□ -0.19
ATL2-217ENST00000629272 PLEKHG5O94827 1062 aa13.81□□□□□ -0.2
ATL2-217ENST00000629272 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
ATL2-217ENST00000629272 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
ATL2-217ENST00000629272 ZNF579Q8NAF0 562 aaKnown RBP13.75□□□□□ -0.21
ATL2-217ENST00000629272 CCDC61Q9Y6R9 512 aa13.72□□□□□ -0.21
ATL2-217ENST00000629272 ZRANB1Q9UGI0 708 aa13.7□□□□□ -0.22
ATL2-217ENST00000629272 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
ATL2-217ENST00000629272 SPOCK2Q92563 424 aa13.64□□□□□ -0.23
ATL2-217ENST00000629272 GABBR2O75899 941 aa13.63□□□□□ -0.23
ATL2-217ENST00000629272 PHF12Q96QT6 1004 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms