RNA–Protein interactions for RNA: ENST00000628620.1

LINC00836-203, long intergenic non-protein coding RNA 836, humanhuman

TSL 5 BASIC

Gene LINC00836, Length 1,179 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00836-203ENST00000628620 AEBP2Q6ZN18 517 aaPredicted RBP33.06■■■□□ 2.88
LINC00836-203ENST00000628620 CHIC1Q5VXU3 224 aa32.09■■■□□ 2.73
LINC00836-203ENST00000628620 SENP3Q9H4L4 574 aaPredicted RBP28.26■■■□□ 2.11
LINC00836-203ENST00000628620 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
LINC00836-203ENST00000628620 FOXD1Q16676 465 aa26.23■■□□□ 1.79
LINC00836-203ENST00000628620 PLPPR3Q6T4P5 718 aa26.01■■□□□ 1.75
LINC00836-203ENST00000628620 ADRA2BP18089 450 aa24.93■■□□□ 1.58
LINC00836-203ENST00000628620 PPP6R1Q9UPN7 881 aa24.91■■□□□ 1.58
LINC00836-203ENST00000628620 MSH5O43196 834 aa24.7■■□□□ 1.54
LINC00836-203ENST00000628620 PIAS4Q8N2W9 510 aaPredicted RBP24.7■■□□□ 1.54
LINC00836-203ENST00000628620 POTEDQ86YR6 584 aa24.51■■□□□ 1.51
LINC00836-203ENST00000628620 SCAF1Q9H7N4 1312 aaKnown RBP22.97■■□□□ 1.27
LINC00836-203ENST00000628620 PPP4R3CPQ6ZMV5 832 aa22.84■■□□□ 1.25
LINC00836-203ENST00000628620 MAPK8IP2Q13387 824 aaPredicted RBP22.68■■□□□ 1.22
LINC00836-203ENST00000628620 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
LINC00836-203ENST00000628620 CNKSR2Q8WXI2 1034 aa22.3■■□□□ 1.16
LINC00836-203ENST00000628620 NCBP3Q53F19 620 aaKnown RBP22.27■■□□□ 1.16
LINC00836-203ENST00000628620 KCNA4P22459 653 aa21.92■■□□□ 1.1
LINC00836-203ENST00000628620 RNF216Q9NWF9 866 aaPredicted RBP21.92■■□□□ 1.1
LINC00836-203ENST00000628620 HOXD11P31277 338 aaPredicted RBP21.85■■□□□ 1.09
LINC00836-203ENST00000628620 NPM3O75607 178 aaKnown RBP21.79■■□□□ 1.08
LINC00836-203ENST00000628620 DCAF8L1A6NGE4 600 aa21.65■■□□□ 1.06
LINC00836-203ENST00000628620 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
LINC00836-203ENST00000628620 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
LINC00836-203ENST00000628620 RNF39Q9H2S5 420 aa21.02■□□□□ 0.96
LINC00836-203ENST00000628620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
LINC00836-203ENST00000628620 SLC4A1APQ9BWU0 796 aaKnown RBP20.9■□□□□ 0.94
LINC00836-203ENST00000628620 C1QBPQ07021 282 aaKnown RBP20.73■□□□□ 0.91
LINC00836-203ENST00000628620 SLC4A2P04920 1241 aa20.6■□□□□ 0.89
LINC00836-203ENST00000628620 U3KPZ7 1027 aaPredicted RBP20.45■□□□□ 0.86
LINC00836-203ENST00000628620 FOXD4L1Q9NU39 408 aa20.33■□□□□ 0.85
LINC00836-203ENST00000628620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.27■□□□□ 0.84
LINC00836-203ENST00000628620 HNRNPUL2Q1KMD3 747 aaKnown RBP20.27■□□□□ 0.84
LINC00836-203ENST00000628620 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
LINC00836-203ENST00000628620 APLP2Q06481 763 aa20.17■□□□□ 0.82
LINC00836-203ENST00000628620 SAMD1Q6SPF0 538 aaPredicted RBP20.14■□□□□ 0.81
LINC00836-203ENST00000628620 ZBTB22O15209 634 aa20.08■□□□□ 0.81
LINC00836-203ENST00000628620 CAPN15O75808 1086 aa20.04■□□□□ 0.8
LINC00836-203ENST00000628620 SPINK5Q9NQ38 1064 aaPredicted RBP19.98■□□□□ 0.79
LINC00836-203ENST00000628620 EHMT2Q96KQ7 1210 aa19.96■□□□□ 0.79
LINC00836-203ENST00000628620 TRHP20396 242 aaPredicted RBP19.86■□□□□ 0.77
LINC00836-203ENST00000628620 ZNF219Q9P2Y4 722 aaPredicted RBP19.86■□□□□ 0.77
LINC00836-203ENST00000628620 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
LINC00836-203ENST00000628620 DSG3P32926 999 aa19.67■□□□□ 0.74
LINC00836-203ENST00000628620 ATXN8OSP0DMR3 200 aa19.66■□□□□ 0.74
LINC00836-203ENST00000628620 ATF5Q9Y2D1 282 aaPredicted RBP19.57■□□□□ 0.72
LINC00836-203ENST00000628620 ABCB7O75027 752 aa19.56■□□□□ 0.72
LINC00836-203ENST00000628620 POLA2Q14181 598 aa19.42■□□□□ 0.7
LINC00836-203ENST00000628620 POTEHQ6S545 545 aa19.16■□□□□ 0.66
LINC00836-203ENST00000628620 ZBTB12Q9Y330 459 aaPredicted RBP19.16■□□□□ 0.66
LINC00836-203ENST00000628620 FBLN2P98095 1184 aa18.98■□□□□ 0.63
LINC00836-203ENST00000628620 RBM42Q9BTD8 480 aaKnown RBP18.87■□□□□ 0.61
LINC00836-203ENST00000628620 OSCARQ8IYS5 282 aa18.75■□□□□ 0.59
LINC00836-203ENST00000628620 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
LINC00836-203ENST00000628620 SPDYE2BA6NHP3 402 aa18.57■□□□□ 0.56
LINC00836-203ENST00000628620 SPDYE6P0CI01 402 aa18.57■□□□□ 0.56
LINC00836-203ENST00000628620 SPDYE2Q495Y8 402 aa18.57■□□□□ 0.56
LINC00836-203ENST00000628620 AKT1S1Q96B36 256 aa18.53■□□□□ 0.56
LINC00836-203ENST00000628620 ZNF692Q9BU19 519 aaPredicted RBP18.48■□□□□ 0.55
LINC00836-203ENST00000628620 CHRDL2Q6WN34 429 aa18.39■□□□□ 0.53
LINC00836-203ENST00000628620 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
LINC00836-203ENST00000628620 SSUH2Q9Y2M2 353 aa18.31■□□□□ 0.52
LINC00836-203ENST00000628620 SPDYE4A6NLX3 237 aa18.27■□□□□ 0.52
LINC00836-203ENST00000628620 PABPN1Q86U42 306 aaKnown RBP eCLIP18.19■□□□□ 0.5
LINC00836-203ENST00000628620 SPDYE1Q8NFV5 336 aaPredicted RBP18.12■□□□□ 0.49
LINC00836-203ENST00000628620 PITPNM1O00562 1244 aa18.08■□□□□ 0.48
LINC00836-203ENST00000628620 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.48
LINC00836-203ENST00000628620 FKBP8Q14318 412 aa18.01■□□□□ 0.47
LINC00836-203ENST00000628620 STAG3Q9UJ98 1225 aa17.9■□□□□ 0.46
LINC00836-203ENST00000628620 PIP4P2Q8N4L2 257 aa17.89■□□□□ 0.45
LINC00836-203ENST00000628620 PRR29P0C7W0 189 aa17.87■□□□□ 0.45
LINC00836-203ENST00000628620 SP7Q8TDD2 431 aaPredicted RBP17.84■□□□□ 0.45
LINC00836-203ENST00000628620 FXR2P51116 673 aaKnown RBP eCLIP17.8■□□□□ 0.44
LINC00836-203ENST00000628620 PROM2Q8N271 834 aa17.79■□□□□ 0.44
LINC00836-203ENST00000628620 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
LINC00836-203ENST00000628620 HAX1O00165 279 aa17.64■□□□□ 0.41
LINC00836-203ENST00000628620 CHADLQ6NUI6 762 aa17.58■□□□□ 0.4
LINC00836-203ENST00000628620 FBXO3Q9UK99 471 aa17.52■□□□□ 0.4
LINC00836-203ENST00000628620 PLEKHG5O94827 1062 aa17.47■□□□□ 0.39
LINC00836-203ENST00000628620 CREBZFQ9NS37 354 aa17.46■□□□□ 0.39
LINC00836-203ENST00000628620 MIER1Q8N108 512 aa17.41■□□□□ 0.38
LINC00836-203ENST00000628620 FARP1Q9Y4F1 1045 aaPredicted RBP17.4■□□□□ 0.38
LINC00836-203ENST00000628620 EVX2Q03828 476 aa17.38■□□□□ 0.37
LINC00836-203ENST00000628620 PLCD3Q8N3E9 789 aa17.38■□□□□ 0.37
LINC00836-203ENST00000628620 NPM1P06748 294 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00836-203ENST00000628620 ZBTB47Q9UFB7 747 aaPredicted RBP17.23■□□□□ 0.35
LINC00836-203ENST00000628620 C19orf67A6NJJ6 358 aa17.21■□□□□ 0.35
LINC00836-203ENST00000628620 VASPP50552 380 aaPredicted RBP17.2■□□□□ 0.34
LINC00836-203ENST00000628620 MNX1P50219 401 aaPredicted RBP17.17■□□□□ 0.34
LINC00836-203ENST00000628620 CD44P16070 742 aaKnown RBP17.16■□□□□ 0.34
LINC00836-203ENST00000628620 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
LINC00836-203ENST00000628620 KLHL34Q8N239 644 aa17.09■□□□□ 0.33
LINC00836-203ENST00000628620 ZRANB1Q9UGI0 708 aa17.04■□□□□ 0.32
LINC00836-203ENST00000628620 GABBR2O75899 941 aa17.01■□□□□ 0.31
LINC00836-203ENST00000628620 TSPYL2Q9H2G4 693 aaPredicted RBP16.96■□□□□ 0.31
LINC00836-203ENST00000628620 IFNLR1Q8IU57 520 aaPredicted RBP16.89■□□□□ 0.29
LINC00836-203ENST00000628620 CLCN6P51797 869 aa16.88■□□□□ 0.29
LINC00836-203ENST00000628620 NUBP1P53384 320 aa16.88■□□□□ 0.29
LINC00836-203ENST00000628620 RASEFQ8IZ41 740 aa16.88■□□□□ 0.29
LINC00836-203ENST00000628620 ZNF579Q8NAF0 562 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms