RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
VBP1-204ENST00000625964 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
VBP1-204ENST00000625964 SENP3Q9H4L4 574 aaPredicted RBP22.7■■□□□ 1.22
VBP1-204ENST00000625964 PHF23Q9BUL5 403 aaPredicted RBP22.3■■□□□ 1.16
VBP1-204ENST00000625964 POTEDQ86YR6 584 aa21.3■■□□□ 1
VBP1-204ENST00000625964 FOXD1Q16676 465 aa21.11■□□□□ 0.97
VBP1-204ENST00000625964 MSH5O43196 834 aa19.99■□□□□ 0.79
VBP1-204ENST00000625964 PLPPR3Q6T4P5 718 aa19.74■□□□□ 0.75
VBP1-204ENST00000625964 PIAS4Q8N2W9 510 aaPredicted RBP19.66■□□□□ 0.74
VBP1-204ENST00000625964 PPP6R1Q9UPN7 881 aa19.43■□□□□ 0.7
VBP1-204ENST00000625964 ADRA2BP18089 450 aa19.35■□□□□ 0.69
VBP1-204ENST00000625964 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
VBP1-204ENST00000625964 SCAF1Q9H7N4 1312 aaKnown RBP17.89■□□□□ 0.45
VBP1-204ENST00000625964 MAPK8IP2Q13387 824 aaPredicted RBP17.87■□□□□ 0.45
VBP1-204ENST00000625964 CACNB1Q02641 598 aaPredicted RBP17.47■□□□□ 0.39
VBP1-204ENST00000625964 PPP4R3CPQ6ZMV5 832 aa17.21■□□□□ 0.35
VBP1-204ENST00000625964 HOXD11P31277 338 aaPredicted RBP17.16■□□□□ 0.34
VBP1-204ENST00000625964 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
VBP1-204ENST00000625964 CNKSR2Q8WXI2 1034 aa17.01■□□□□ 0.31
VBP1-204ENST00000625964 RNF39Q9H2S5 420 aa16.96■□□□□ 0.31
VBP1-204ENST00000625964 RNF216Q9NWF9 866 aaPredicted RBP16.95■□□□□ 0.3
VBP1-204ENST00000625964 C1QBPQ07021 282 aaKnown RBP16.77■□□□□ 0.28
VBP1-204ENST00000625964 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
VBP1-204ENST00000625964 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
VBP1-204ENST00000625964 POTEHQ6S545 545 aa16.44■□□□□ 0.22
VBP1-204ENST00000625964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.32■□□□□ 0.25e-6■■□□□ 11.4
VBP1-204ENST00000625964 NPM3O75607 178 aaKnown RBP16.19■□□□□ 0.18
VBP1-204ENST00000625964 U3KPZ7 1027 aaPredicted RBP15.91■□□□□ 0.14
VBP1-204ENST00000625964 CAPN15O75808 1086 aa15.78■□□□□ 0.12
VBP1-204ENST00000625964 DSG3P32926 999 aa15.77■□□□□ 0.11
VBP1-204ENST00000625964 SPINK5Q9NQ38 1064 aaPredicted RBP15.73■□□□□ 0.11
VBP1-204ENST00000625964 APLP2Q06481 763 aa15.59■□□□□ 0.09
VBP1-204ENST00000625964 KCNA4P22459 653 aa15.55■□□□□ 0.08
VBP1-204ENST00000625964 SLC4A2P04920 1241 aa15.53■□□□□ 0.08
VBP1-204ENST00000625964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
VBP1-204ENST00000625964 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
VBP1-204ENST00000625964 ZNF219Q9P2Y4 722 aaPredicted RBP15.47■□□□□ 0.07
VBP1-204ENST00000625964 TRHP20396 242 aaPredicted RBP15.43■□□□□ 0.06
VBP1-204ENST00000625964 SAMD1Q6SPF0 538 aaPredicted RBP15.33■□□□□ 0.05
VBP1-204ENST00000625964 ABCB7O75027 752 aa15.33■□□□□ 0.04
VBP1-204ENST00000625964 RBM42Q9BTD8 480 aaKnown RBP15.15■□□□□ 0.02
VBP1-204ENST00000625964 MYCNP04198 464 aaPredicted RBP15.05■□□□□ -0
VBP1-204ENST00000625964 POLA2Q14181 598 aa14.96□□□□□ -0.02
VBP1-204ENST00000625964 CHRDL2Q6WN34 429 aa14.86□□□□□ -0.03
VBP1-204ENST00000625964 ZBTB12Q9Y330 459 aaPredicted RBP14.74□□□□□ -0.05
VBP1-204ENST00000625964 AKT1S1Q96B36 256 aa14.7□□□□□ -0.06
VBP1-204ENST00000625964 FOXD4L1Q9NU39 408 aa14.7□□□□□ -0.06
VBP1-204ENST00000625964 SP7Q8TDD2 431 aaPredicted RBP14.68□□□□□ -0.06
VBP1-204ENST00000625964 SLC4A1APQ9BWU0 796 aaKnown RBP14.66□□□□□ -0.06
VBP1-204ENST00000625964 ATF5Q9Y2D1 282 aaPredicted RBP14.6□□□□□ -0.07
VBP1-204ENST00000625964 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
VBP1-204ENST00000625964 OSCARQ8IYS5 282 aa14.45□□□□□ -0.1
VBP1-204ENST00000625964 PIP4P2Q8N4L2 257 aa14.41□□□□□ -0.1
VBP1-204ENST00000625964 ATXN8OSP0DMR3 200 aa14.34□□□□□ -0.11
VBP1-204ENST00000625964 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
VBP1-204ENST00000625964 FXR2P51116 673 aaKnown RBP eCLIP14.32□□□□□ -0.12
VBP1-204ENST00000625964 PLSCR2Q9NRY7 297 aa14.32□□□□□ -0.12
VBP1-204ENST00000625964 HAX1O00165 279 aa14.26□□□□□ -0.13
VBP1-204ENST00000625964 ZBTB22O15209 634 aa14.25□□□□□ -0.13
VBP1-204ENST00000625964 SPDYE2BA6NHP3 402 aa14.21□□□□□ -0.13
VBP1-204ENST00000625964 SPDYE6P0CI01 402 aa14.21□□□□□ -0.13
VBP1-204ENST00000625964 SPDYE2Q495Y8 402 aa14.21□□□□□ -0.13
VBP1-204ENST00000625964 FBLN2P98095 1184 aa14.2□□□□□ -0.14
VBP1-204ENST00000625964 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
VBP1-204ENST00000625964 PRKAR2AP13861 404 aaKnown RBP13.98□□□□□ -0.17
VBP1-204ENST00000625964 EVX2Q03828 476 aa13.98□□□□□ -0.17
VBP1-204ENST00000625964 CLEC11AQ9Y240 323 aa13.96□□□□□ -0.17
VBP1-204ENST00000625964 ZNF692Q9BU19 519 aaPredicted RBP13.95□□□□□ -0.18
VBP1-204ENST00000625964 SSUH2Q9Y2M2 353 aa13.95□□□□□ -0.18
VBP1-204ENST00000625964 MKRN4PQ13434 485 aaPredicted RBP13.94□□□□□ -0.18
VBP1-204ENST00000625964 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
VBP1-204ENST00000625964 LHX8Q68G74 356 aa13.77□□□□□ -0.21
VBP1-204ENST00000625964 PRR29P0C7W0 189 aa13.74□□□□□ -0.21
VBP1-204ENST00000625964 GABBR2O75899 941 aa13.72□□□□□ -0.21
VBP1-204ENST00000625964 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
VBP1-204ENST00000625964 CHADLQ6NUI6 762 aa13.69□□□□□ -0.22
VBP1-204ENST00000625964 CLCN6P51797 869 aa13.57□□□□□ -0.24
VBP1-204ENST00000625964 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
VBP1-204ENST00000625964 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
VBP1-204ENST00000625964 POTEIP0CG38 1075 aa13.39□□□□□ -0.27
VBP1-204ENST00000625964 STAG3Q9UJ98 1225 aa13.38□□□□□ -0.27
VBP1-204ENST00000625964 CSRNP3Q8WYN3 585 aa13.35□□□□□ -0.27
VBP1-204ENST00000625964 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
VBP1-204ENST00000625964 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
VBP1-204ENST00000625964 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
VBP1-204ENST00000625964 ZRANB1Q9UGI0 708 aa13.28□□□□□ -0.28
VBP1-204ENST00000625964 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
VBP1-204ENST00000625964 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
VBP1-204ENST00000625964 NPM1P06748 294 aaKnown RBP eCLIP13.12□□□□□ -0.31
VBP1-204ENST00000625964 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
VBP1-204ENST00000625964 POTEMA6NI47 508 aa13.06□□□□□ -0.32
VBP1-204ENST00000625964 PHF12Q96QT6 1004 aa13.01□□□□□ -0.33
VBP1-204ENST00000625964 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
VBP1-204ENST00000625964 OTUD5Q96G74 571 aa12.98□□□□□ -0.33
VBP1-204ENST00000625964 PCDH10Q9P2E7 1040 aa12.98□□□□□ -0.33
VBP1-204ENST00000625964 POTEGQ6S5H5 508 aa12.96□□□□□ -0.33
VBP1-204ENST00000625964 EHMT2Q96KQ7 1210 aa12.94□□□□□ -0.34
VBP1-204ENST00000625964 POTEB2H3BUK9 544 aa12.92□□□□□ -0.34
VBP1-204ENST00000625964 ASTLQ6HA08 431 aaPredicted RBP12.88□□□□□ -0.35
VBP1-204ENST00000625964 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms