RNA–Protein interactions for RNA: ENST00000625278.2

LINC02246-204, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 740 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-204ENST00000625278 AEBP2Q6ZN18 517 aaPredicted RBP36.55■■■■□ 3.44
LINC02246-204ENST00000625278 CHIC1Q5VXU3 224 aa35.68■■■■□ 3.3
LINC02246-204ENST00000625278 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
LINC02246-204ENST00000625278 SENP3Q9H4L4 574 aaPredicted RBP30.9■■■□□ 2.54
LINC02246-204ENST00000625278 PLPPR3Q6T4P5 718 aa28.99■■■□□ 2.23
LINC02246-204ENST00000625278 FOXD1Q16676 465 aa28.77■■■□□ 2.2
LINC02246-204ENST00000625278 PPP6R1Q9UPN7 881 aa27.78■■■□□ 2.04
LINC02246-204ENST00000625278 ADRA2BP18089 450 aa27.77■■■□□ 2.04
LINC02246-204ENST00000625278 PIAS4Q8N2W9 510 aaPredicted RBP27.12■■□□□ 1.93
LINC02246-204ENST00000625278 MSH5O43196 834 aa26.4■■□□□ 1.82
LINC02246-204ENST00000625278 PPP4R3CPQ6ZMV5 832 aa25.61■■□□□ 1.69
LINC02246-204ENST00000625278 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
LINC02246-204ENST00000625278 MAPK8IP2Q13387 824 aaPredicted RBP25.21■■□□□ 1.63
LINC02246-204ENST00000625278 KCNA4P22459 653 aa25.12■■□□□ 1.61
LINC02246-204ENST00000625278 NCBP3Q53F19 620 aaKnown RBP24.89■■□□□ 1.58
LINC02246-204ENST00000625278 CNKSR2Q8WXI2 1034 aa24.82■■□□□ 1.56
LINC02246-204ENST00000625278 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
LINC02246-204ENST00000625278 NPM3O75607 178 aaKnown RBP24.59■■□□□ 1.53
LINC02246-204ENST00000625278 RNF216Q9NWF9 866 aaPredicted RBP24.31■■□□□ 1.48
LINC02246-204ENST00000625278 HOXD11P31277 338 aaPredicted RBP24.19■■□□□ 1.46
LINC02246-204ENST00000625278 POTEDQ86YR6 584 aa24.02■■□□□ 1.44
LINC02246-204ENST00000625278 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
LINC02246-204ENST00000625278 DCAF8L1A6NGE4 600 aa23.75■■□□□ 1.39
LINC02246-204ENST00000625278 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
LINC02246-204ENST00000625278 EHMT2Q96KQ7 1210 aa23.37■■□□□ 1.33
LINC02246-204ENST00000625278 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
LINC02246-204ENST00000625278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
LINC02246-204ENST00000625278 ZBTB22O15209 634 aa23.12■■□□□ 1.29
LINC02246-204ENST00000625278 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
LINC02246-204ENST00000625278 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
LINC02246-204ENST00000625278 U3KPZ7 1027 aaPredicted RBP22.74■■□□□ 1.23
LINC02246-204ENST00000625278 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
LINC02246-204ENST00000625278 MYCNP04198 464 aaPredicted RBP22.65■■□□□ 1.22
LINC02246-204ENST00000625278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
LINC02246-204ENST00000625278 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
LINC02246-204ENST00000625278 C1QBPQ07021 282 aaKnown RBP22.36■■□□□ 1.17
LINC02246-204ENST00000625278 SAMD1Q6SPF0 538 aaPredicted RBP22.33■■□□□ 1.17
LINC02246-204ENST00000625278 ATF5Q9Y2D1 282 aaPredicted RBP22.18■■□□□ 1.14
LINC02246-204ENST00000625278 ATXN8OSP0DMR3 200 aa22.16■■□□□ 1.14
LINC02246-204ENST00000625278 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
LINC02246-204ENST00000625278 APLP2Q06481 763 aa22.11■■□□□ 1.13
LINC02246-204ENST00000625278 CACNB1Q02641 598 aaPredicted RBP22.09■■□□□ 1.13
LINC02246-204ENST00000625278 CAPN15O75808 1086 aa22.04■■□□□ 1.12
LINC02246-204ENST00000625278 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
LINC02246-204ENST00000625278 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
LINC02246-204ENST00000625278 ABCB7O75027 752 aa21.66■■□□□ 1.06
LINC02246-204ENST00000625278 DSG3P32926 999 aa21.62■■□□□ 1.05
LINC02246-204ENST00000625278 POLA2Q14181 598 aa21.62■■□□□ 1.05
LINC02246-204ENST00000625278 MKRN4PQ13434 485 aaPredicted RBP21.17■□□□□ 0.98
LINC02246-204ENST00000625278 FBLN2P98095 1184 aa21.14■□□□□ 0.97
LINC02246-204ENST00000625278 ZBTB12Q9Y330 459 aaPredicted RBP21.12■□□□□ 0.97
LINC02246-204ENST00000625278 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
LINC02246-204ENST00000625278 FKBP8Q14318 412 aa20.83■□□□□ 0.93
LINC02246-204ENST00000625278 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
LINC02246-204ENST00000625278 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE2BA6NHP3 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE6P0CI01 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE2Q495Y8 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
LINC02246-204ENST00000625278 SSUH2Q9Y2M2 353 aa20.45■□□□□ 0.86
LINC02246-204ENST00000625278 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
LINC02246-204ENST00000625278 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
LINC02246-204ENST00000625278 PROM2Q8N271 834 aa20.29■□□□□ 0.84
LINC02246-204ENST00000625278 REM2Q8IYK8 340 aaPredicted RBP20.18■□□□□ 0.82
LINC02246-204ENST00000625278 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
LINC02246-204ENST00000625278 SPDYE1Q8NFV5 336 aaPredicted RBP19.99■□□□□ 0.79
LINC02246-204ENST00000625278 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
LINC02246-204ENST00000625278 PITPNM1O00562 1244 aa19.94■□□□□ 0.78
LINC02246-204ENST00000625278 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
LINC02246-204ENST00000625278 PRR29P0C7W0 189 aa19.79■□□□□ 0.76
LINC02246-204ENST00000625278 VASPP50552 380 aaPredicted RBP19.74■□□□□ 0.75
LINC02246-204ENST00000625278 CHRDL2Q6WN34 429 aa19.71■□□□□ 0.75
LINC02246-204ENST00000625278 MIER1Q8N108 512 aa19.68■□□□□ 0.74
LINC02246-204ENST00000625278 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
LINC02246-204ENST00000625278 CREBZFQ9NS37 354 aa19.55■□□□□ 0.72
LINC02246-204ENST00000625278 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
LINC02246-204ENST00000625278 FXR2P51116 673 aaKnown RBP eCLIP19.52■□□□□ 0.72
LINC02246-204ENST00000625278 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
LINC02246-204ENST00000625278 PIP4P2Q8N4L2 257 aa19.49■□□□□ 0.71
LINC02246-204ENST00000625278 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
LINC02246-204ENST00000625278 PRKAR2AP13861 404 aaKnown RBP19.46■□□□□ 0.71
LINC02246-204ENST00000625278 KLHL34Q8N239 644 aa19.46■□□□□ 0.71
LINC02246-204ENST00000625278 MNX1P50219 401 aaPredicted RBP19.33■□□□□ 0.68
LINC02246-204ENST00000625278 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
LINC02246-204ENST00000625278 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
LINC02246-204ENST00000625278 SPOCK2Q92563 424 aa19.24■□□□□ 0.67
LINC02246-204ENST00000625278 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
LINC02246-204ENST00000625278 NUBP1P53384 320 aa19.12■□□□□ 0.65
LINC02246-204ENST00000625278 RASEFQ8IZ41 740 aa19.05■□□□□ 0.64
LINC02246-204ENST00000625278 RTN4Q9NQC3 1192 aaKnown RBP19.05■□□□□ 0.64
LINC02246-204ENST00000625278 POTEHQ6S545 545 aa19.02■□□□□ 0.64
LINC02246-204ENST00000625278 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
LINC02246-204ENST00000625278 DCAF8Q5TAQ9 597 aa19■□□□□ 0.63
LINC02246-204ENST00000625278 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
LINC02246-204ENST00000625278 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
LINC02246-204ENST00000625278 FAM212AQ96EL1 285 aa18.93■□□□□ 0.62
LINC02246-204ENST00000625278 HAX1O00165 279 aa18.89■□□□□ 0.61
LINC02246-204ENST00000625278 CD44P16070 742 aaKnown RBP18.89■□□□□ 0.61
LINC02246-204ENST00000625278 PKD2Q13563 968 aa18.89■□□□□ 0.61
LINC02246-204ENST00000625278 GSE1Q14687 1217 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms