RNA–Protein interactions for RNA: ENST00000625278.2

LINC02246-204, Transcript of long intergenic non-protein coding RNA 2246, humanhuman

TSL 5 BASIC

Gene LINC02246, Length 740 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02246-204ENST00000625278 AEBP2Q6ZN18 517 aaPredicted RBP36.55■■■■□ 3.44
LINC02246-204ENST00000625278 CHIC1Q5VXU3 224 aa35.68■■■■□ 3.3
LINC02246-204ENST00000625278 PHF23Q9BUL5 403 aaPredicted RBP31.46■■■□□ 2.63
LINC02246-204ENST00000625278 SENP3Q9H4L4 574 aaPredicted RBP30.9■■■□□ 2.54
LINC02246-204ENST00000625278 PLPPR3Q6T4P5 718 aa28.99■■■□□ 2.23
LINC02246-204ENST00000625278 FOXD1Q16676 465 aa28.77■■■□□ 2.2
LINC02246-204ENST00000625278 PPP6R1Q9UPN7 881 aa27.78■■■□□ 2.04
LINC02246-204ENST00000625278 ADRA2BP18089 450 aa27.77■■■□□ 2.04
LINC02246-204ENST00000625278 PIAS4Q8N2W9 510 aaPredicted RBP27.12■■□□□ 1.93
LINC02246-204ENST00000625278 MSH5O43196 834 aa26.4■■□□□ 1.82
LINC02246-204ENST00000625278 PPP4R3CPQ6ZMV5 832 aa25.61■■□□□ 1.69
LINC02246-204ENST00000625278 SCAF1Q9H7N4 1312 aaKnown RBP25.28■■□□□ 1.64
LINC02246-204ENST00000625278 MAPK8IP2Q13387 824 aaPredicted RBP25.21■■□□□ 1.63
LINC02246-204ENST00000625278 KCNA4P22459 653 aa25.12■■□□□ 1.61
LINC02246-204ENST00000625278 NCBP3Q53F19 620 aaKnown RBP24.89■■□□□ 1.58
LINC02246-204ENST00000625278 CNKSR2Q8WXI2 1034 aa24.82■■□□□ 1.56
LINC02246-204ENST00000625278 DMRT2Q9Y5R5 561 aa24.7■■□□□ 1.54
LINC02246-204ENST00000625278 NPM3O75607 178 aaKnown RBP24.59■■□□□ 1.53
LINC02246-204ENST00000625278 RNF216Q9NWF9 866 aaPredicted RBP24.31■■□□□ 1.48
LINC02246-204ENST00000625278 HOXD11P31277 338 aaPredicted RBP24.19■■□□□ 1.46
LINC02246-204ENST00000625278 POTEDQ86YR6 584 aa24.02■■□□□ 1.44
LINC02246-204ENST00000625278 SLC4A1APQ9BWU0 796 aaKnown RBP23.9■■□□□ 1.42
LINC02246-204ENST00000625278 DCAF8L1A6NGE4 600 aa23.75■■□□□ 1.39
LINC02246-204ENST00000625278 DNAJC5BQ9UF47 199 aa23.68■■□□□ 1.38
LINC02246-204ENST00000625278 EHMT2Q96KQ7 1210 aa23.37■■□□□ 1.33
LINC02246-204ENST00000625278 SLC4A2P04920 1241 aa23.22■■□□□ 1.31
LINC02246-204ENST00000625278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.13■■□□□ 1.29
LINC02246-204ENST00000625278 ZBTB22O15209 634 aa23.12■■□□□ 1.29
LINC02246-204ENST00000625278 CSRNP3Q8WYN3 585 aa23.04■■□□□ 1.28
LINC02246-204ENST00000625278 FOXD4L1Q9NU39 408 aa23.02■■□□□ 1.28
LINC02246-204ENST00000625278 U3KPZ7 1027 aaPredicted RBP22.74■■□□□ 1.23
LINC02246-204ENST00000625278 RNF39Q9H2S5 420 aa22.66■■□□□ 1.22
LINC02246-204ENST00000625278 MYCNP04198 464 aaPredicted RBP22.65■■□□□ 1.22
LINC02246-204ENST00000625278 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.38■■□□□ 1.17
LINC02246-204ENST00000625278 HNRNPUL2Q1KMD3 747 aaKnown RBP22.38■■□□□ 1.17
LINC02246-204ENST00000625278 C1QBPQ07021 282 aaKnown RBP22.36■■□□□ 1.17
LINC02246-204ENST00000625278 SAMD1Q6SPF0 538 aaPredicted RBP22.33■■□□□ 1.17
LINC02246-204ENST00000625278 ATF5Q9Y2D1 282 aaPredicted RBP22.18■■□□□ 1.14
LINC02246-204ENST00000625278 ATXN8OSP0DMR3 200 aa22.16■■□□□ 1.14
LINC02246-204ENST00000625278 SPINK5Q9NQ38 1064 aaPredicted RBP22.15■■□□□ 1.14
LINC02246-204ENST00000625278 APLP2Q06481 763 aa22.11■■□□□ 1.13
LINC02246-204ENST00000625278 CACNB1Q02641 598 aaPredicted RBP22.09■■□□□ 1.13
LINC02246-204ENST00000625278 CAPN15O75808 1086 aa22.04■■□□□ 1.12
LINC02246-204ENST00000625278 TRHP20396 242 aaPredicted RBP21.98■■□□□ 1.11
LINC02246-204ENST00000625278 ZNF219Q9P2Y4 722 aaPredicted RBP21.84■■□□□ 1.09
LINC02246-204ENST00000625278 ABCB7O75027 752 aa21.66■■□□□ 1.06
LINC02246-204ENST00000625278 DSG3P32926 999 aa21.62■■□□□ 1.05
LINC02246-204ENST00000625278 POLA2Q14181 598 aa21.62■■□□□ 1.05
LINC02246-204ENST00000625278 MKRN4PQ13434 485 aaPredicted RBP21.17■□□□□ 0.98
LINC02246-204ENST00000625278 FBLN2P98095 1184 aa21.14■□□□□ 0.97
LINC02246-204ENST00000625278 ZBTB12Q9Y330 459 aaPredicted RBP21.12■□□□□ 0.97
LINC02246-204ENST00000625278 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
LINC02246-204ENST00000625278 FKBP8Q14318 412 aa20.83■□□□□ 0.93
LINC02246-204ENST00000625278 SPDYE4A6NLX3 237 aa20.71■□□□□ 0.91
LINC02246-204ENST00000625278 ZNF692Q9BU19 519 aaPredicted RBP20.61■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE2BA6NHP3 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE6P0CI01 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 SPDYE2Q495Y8 402 aa20.59■□□□□ 0.89
LINC02246-204ENST00000625278 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
LINC02246-204ENST00000625278 SSUH2Q9Y2M2 353 aa20.45■□□□□ 0.86
LINC02246-204ENST00000625278 PABPN1Q86U42 306 aaKnown RBP eCLIP20.35■□□□□ 0.85
LINC02246-204ENST00000625278 AKT1S1Q96B36 256 aa20.31■□□□□ 0.84
LINC02246-204ENST00000625278 PROM2Q8N271 834 aa20.29■□□□□ 0.84
LINC02246-204ENST00000625278 REM2Q8IYK8 340 aaPredicted RBP20.18■□□□□ 0.82
LINC02246-204ENST00000625278 CLEC11AQ9Y240 323 aa20.01■□□□□ 0.79
LINC02246-204ENST00000625278 SPDYE1Q8NFV5 336 aaPredicted RBP19.99■□□□□ 0.79
LINC02246-204ENST00000625278 FBXO3Q9UK99 471 aa19.98■□□□□ 0.79
LINC02246-204ENST00000625278 PITPNM1O00562 1244 aa19.94■□□□□ 0.78
LINC02246-204ENST00000625278 STAG3Q9UJ98 1225 aa19.92■□□□□ 0.78
LINC02246-204ENST00000625278 PRR29P0C7W0 189 aa19.79■□□□□ 0.76
LINC02246-204ENST00000625278 VASPP50552 380 aaPredicted RBP19.74■□□□□ 0.75
LINC02246-204ENST00000625278 CHRDL2Q6WN34 429 aa19.71■□□□□ 0.75
LINC02246-204ENST00000625278 MIER1Q8N108 512 aa19.68■□□□□ 0.74
LINC02246-204ENST00000625278 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
LINC02246-204ENST00000625278 CREBZFQ9NS37 354 aa19.55■□□□□ 0.72
LINC02246-204ENST00000625278 IFNLR1Q8IU57 520 aaPredicted RBP19.53■□□□□ 0.72
LINC02246-204ENST00000625278 FXR2P51116 673 aaKnown RBP eCLIP19.52■□□□□ 0.72
LINC02246-204ENST00000625278 CHADLQ6NUI6 762 aa19.52■□□□□ 0.72
LINC02246-204ENST00000625278 PIP4P2Q8N4L2 257 aa19.49■□□□□ 0.71
LINC02246-204ENST00000625278 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
LINC02246-204ENST00000625278 PRKAR2AP13861 404 aaKnown RBP19.46■□□□□ 0.71
LINC02246-204ENST00000625278 KLHL34Q8N239 644 aa19.46■□□□□ 0.71
LINC02246-204ENST00000625278 MNX1P50219 401 aaPredicted RBP19.33■□□□□ 0.68
LINC02246-204ENST00000625278 ZBTB47Q9UFB7 747 aaPredicted RBP19.3■□□□□ 0.68
LINC02246-204ENST00000625278 FARP1Q9Y4F1 1045 aaPredicted RBP19.28■□□□□ 0.68
LINC02246-204ENST00000625278 SPOCK2Q92563 424 aa19.24■□□□□ 0.67
LINC02246-204ENST00000625278 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
LINC02246-204ENST00000625278 NUBP1P53384 320 aa19.12■□□□□ 0.65
LINC02246-204ENST00000625278 RASEFQ8IZ41 740 aa19.05■□□□□ 0.64
LINC02246-204ENST00000625278 RTN4Q9NQC3 1192 aaKnown RBP19.05■□□□□ 0.64
LINC02246-204ENST00000625278 POTEHQ6S545 545 aa19.02■□□□□ 0.64
LINC02246-204ENST00000625278 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
LINC02246-204ENST00000625278 DCAF8Q5TAQ9 597 aa19■□□□□ 0.63
LINC02246-204ENST00000625278 CIZ1Q9ULV3 898 aaPredicted RBP19■□□□□ 0.63
LINC02246-204ENST00000625278 TSPYL2Q9H2G4 693 aaPredicted RBP18.97■□□□□ 0.63
LINC02246-204ENST00000625278 FAM212AQ96EL1 285 aa18.93■□□□□ 0.62
LINC02246-204ENST00000625278 HAX1O00165 279 aa18.89■□□□□ 0.61
LINC02246-204ENST00000625278 CD44P16070 742 aaKnown RBP18.89■□□□□ 0.61
LINC02246-204ENST00000625278 PKD2Q13563 968 aa18.89■□□□□ 0.61
LINC02246-204ENST00000625278 GSE1Q14687 1217 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms