RNA–Protein interactions for RNA: ENST00000624927.3

LINC01128-215, Transcript of long intergenic non-protein coding RNA 1128, humanhuman

TSL 5

Gene LINC01128, Length 677 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01128-215ENST00000624927 AEBP2Q6ZN18 517 aaPredicted RBP24.75■■□□□ 1.55
LINC01128-215ENST00000624927 CHIC1Q5VXU3 224 aa23.94■■□□□ 1.42
LINC01128-215ENST00000624927 SENP3Q9H4L4 574 aaPredicted RBP21.15■□□□□ 0.98
LINC01128-215ENST00000624927 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
LINC01128-215ENST00000624927 FOXD1Q16676 465 aa19.61■□□□□ 0.73
LINC01128-215ENST00000624927 PLPPR3Q6T4P5 718 aa19.33■□□□□ 0.68
LINC01128-215ENST00000624927 PPP6R1Q9UPN7 881 aa18.6■□□□□ 0.57
LINC01128-215ENST00000624927 ADRA2BP18089 450 aa18.58■□□□□ 0.56
LINC01128-215ENST00000624927 PIAS4Q8N2W9 510 aaPredicted RBP18.45■□□□□ 0.54
LINC01128-215ENST00000624927 MSH5O43196 834 aa18.27■□□□□ 0.52
LINC01128-215ENST00000624927 POTEDQ86YR6 584 aa17.21■□□□□ 0.35
LINC01128-215ENST00000624927 SCAF1Q9H7N4 1312 aaKnown RBP17.11■□□□□ 0.33
LINC01128-215ENST00000624927 PPP4R3CPQ6ZMV5 832 aa16.97■□□□□ 0.31
LINC01128-215ENST00000624927 MAPK8IP2Q13387 824 aaPredicted RBP16.94■□□□□ 0.3
LINC01128-215ENST00000624927 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
LINC01128-215ENST00000624927 CNKSR2Q8WXI2 1034 aa16.59■□□□□ 0.25
LINC01128-215ENST00000624927 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
LINC01128-215ENST00000624927 HOXD11P31277 338 aaPredicted RBP16.35■□□□□ 0.21
LINC01128-215ENST00000624927 RNF216Q9NWF9 866 aaPredicted RBP16.34■□□□□ 0.21
LINC01128-215ENST00000624927 KCNA4P22459 653 aa16.19■□□□□ 0.18
LINC01128-215ENST00000624927 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
LINC01128-215ENST00000624927 DCAF8L1A6NGE4 600 aa16.1■□□□□ 0.17
LINC01128-215ENST00000624927 DNAJC5BQ9UF47 199 aa15.8■□□□□ 0.12
LINC01128-215ENST00000624927 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.59■□□□□ 0.09
LINC01128-215ENST00000624927 RNF39Q9H2S5 420 aa15.58■□□□□ 0.08
LINC01128-215ENST00000624927 CACNB1Q02641 598 aaPredicted RBP15.43■□□□□ 0.06
LINC01128-215ENST00000624927 C1QBPQ07021 282 aaKnown RBP15.43■□□□□ 0.06
LINC01128-215ENST00000624927 SLC4A1APQ9BWU0 796 aaKnown RBP15.4■□□□□ 0.06
LINC01128-215ENST00000624927 SLC4A2P04920 1241 aa15.34■□□□□ 0.05
LINC01128-215ENST00000624927 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
LINC01128-215ENST00000624927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.06■□□□□ 0
LINC01128-215ENST00000624927 HNRNPUL2Q1KMD3 747 aaKnown RBP15.06■□□□□ 0
LINC01128-215ENST00000624927 FOXD4L1Q9NU39 408 aa15.03■□□□□ -0
LINC01128-215ENST00000624927 MYCNP04198 464 aaPredicted RBP15□□□□□ -0.01
LINC01128-215ENST00000624927 APLP2Q06481 763 aa14.99□□□□□ -0.01
LINC01128-215ENST00000624927 SAMD1Q6SPF0 538 aaPredicted RBP14.96□□□□□ -0.01
LINC01128-215ENST00000624927 CAPN15O75808 1086 aa14.92□□□□□ -0.02
LINC01128-215ENST00000624927 SPINK5Q9NQ38 1064 aaPredicted RBP14.91□□□□□ -0.02
LINC01128-215ENST00000624927 ZBTB22O15209 634 aa14.85□□□□□ -0.03
LINC01128-215ENST00000624927 ZNF219Q9P2Y4 722 aaPredicted RBP14.78□□□□□ -0.04
LINC01128-215ENST00000624927 TRHP20396 242 aaPredicted RBP14.76□□□□□ -0.05
LINC01128-215ENST00000624927 DSG3P32926 999 aa14.72□□□□□ -0.05
LINC01128-215ENST00000624927 ABCB7O75027 752 aa14.57□□□□□ -0.08
LINC01128-215ENST00000624927 ATXN8OSP0DMR3 200 aa14.56□□□□□ -0.08
LINC01128-215ENST00000624927 CSRNP3Q8WYN3 585 aa14.56□□□□□ -0.08
LINC01128-215ENST00000624927 EHMT2Q96KQ7 1210 aa14.56□□□□□ -0.08
LINC01128-215ENST00000624927 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
LINC01128-215ENST00000624927 POLA2Q14181 598 aa14.47□□□□□ -0.09
LINC01128-215ENST00000624927 ZBTB12Q9Y330 459 aaPredicted RBP14.25□□□□□ -0.13
LINC01128-215ENST00000624927 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
LINC01128-215ENST00000624927 FBLN2P98095 1184 aa14.05□□□□□ -0.16
LINC01128-215ENST00000624927 OSCARQ8IYS5 282 aa13.94□□□□□ -0.18
LINC01128-215ENST00000624927 MKRN4PQ13434 485 aaPredicted RBP13.9□□□□□ -0.18
LINC01128-215ENST00000624927 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
LINC01128-215ENST00000624927 SPDYE2BA6NHP3 402 aa13.81□□□□□ -0.2
LINC01128-215ENST00000624927 SPDYE6P0CI01 402 aa13.81□□□□□ -0.2
LINC01128-215ENST00000624927 SPDYE2Q495Y8 402 aa13.81□□□□□ -0.2
LINC01128-215ENST00000624927 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
LINC01128-215ENST00000624927 REM2Q8IYK8 340 aaPredicted RBP13.67□□□□□ -0.22
LINC01128-215ENST00000624927 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
LINC01128-215ENST00000624927 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
LINC01128-215ENST00000624927 POTEHQ6S545 545 aa13.52□□□□□ -0.25
LINC01128-215ENST00000624927 SPDYE4A6NLX3 237 aa13.5□□□□□ -0.25
LINC01128-215ENST00000624927 PITPNM1O00562 1244 aa13.5□□□□□ -0.25
LINC01128-215ENST00000624927 PABPN1Q86U42 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC01128-215ENST00000624927 SPDYE1Q8NFV5 336 aaPredicted RBP13.49□□□□□ -0.25
LINC01128-215ENST00000624927 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
LINC01128-215ENST00000624927 PIP4P2Q8N4L2 257 aa13.34□□□□□ -0.27
LINC01128-215ENST00000624927 FXR2P51116 673 aaKnown RBP eCLIP13.33□□□□□ -0.28
LINC01128-215ENST00000624927 PRR29P0C7W0 189 aa13.28□□□□□ -0.28
LINC01128-215ENST00000624927 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
LINC01128-215ENST00000624927 PROM2Q8N271 834 aa13.2□□□□□ -0.3
LINC01128-215ENST00000624927 PRKAR2AP13861 404 aaKnown RBP13.19□□□□□ -0.3
LINC01128-215ENST00000624927 FKBP8Q14318 412 aa13.19□□□□□ -0.3
LINC01128-215ENST00000624927 CHADLQ6NUI6 762 aa13.08□□□□□ -0.32
LINC01128-215ENST00000624927 HAX1O00165 279 aa13.02□□□□□ -0.33
LINC01128-215ENST00000624927 CREBZFQ9NS37 354 aa12.98□□□□□ -0.33
LINC01128-215ENST00000624927 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
LINC01128-215ENST00000624927 C19orf67A6NJJ6 358 aa12.89□□□□□ -0.35
LINC01128-215ENST00000624927 FBXO3Q9UK99 471 aa12.88□□□□□ -0.35
LINC01128-215ENST00000624927 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
LINC01128-215ENST00000624927 MIER1Q8N108 512 aa12.86□□□□□ -0.35
LINC01128-215ENST00000624927 SP7Q8TDD2 431 aaPredicted RBP12.86□□□□□ -0.35
LINC01128-215ENST00000624927 NPM1P06748 294 aaKnown RBP eCLIP12.83□□□□□ -0.36
LINC01128-215ENST00000624927 EVX2Q03828 476 aa12.82□□□□□ -0.36
LINC01128-215ENST00000624927 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
LINC01128-215ENST00000624927 PLCD3Q8N3E9 789 aa12.8□□□□□ -0.36
LINC01128-215ENST00000624927 CD44P16070 742 aaKnown RBP12.79□□□□□ -0.36
LINC01128-215ENST00000624927 ZBTB47Q9UFB7 747 aaPredicted RBP12.72□□□□□ -0.37
LINC01128-215ENST00000624927 PAK3O75914 559 aaPredicted RBP12.7□□□□□ -0.38
LINC01128-215ENST00000624927 ZRANB1Q9UGI0 708 aa12.67□□□□□ -0.38
LINC01128-215ENST00000624927 VASPP50552 380 aaPredicted RBP12.65□□□□□ -0.38
LINC01128-215ENST00000624927 CLCN6P51797 869 aa12.63□□□□□ -0.39
LINC01128-215ENST00000624927 ZNF579Q8NAF0 562 aaKnown RBP12.61□□□□□ -0.39
LINC01128-215ENST00000624927 GABBR2O75899 941 aa12.6□□□□□ -0.39
LINC01128-215ENST00000624927 TSPYL2Q9H2G4 693 aaPredicted RBP12.56□□□□□ -0.4
LINC01128-215ENST00000624927 KLHL34Q8N239 644 aa12.54□□□□□ -0.4
LINC01128-215ENST00000624927 NUBP1P53384 320 aa12.52□□□□□ -0.41
LINC01128-215ENST00000624927 RASEFQ8IZ41 740 aa12.52□□□□□ -0.41
LINC01128-215ENST00000624927 PHF12Q96QT6 1004 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms