RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
KDM4B-212ENST00000624683 DCAF8L2P0C7V8 631 aa25.39■■□□□ 1.65
KDM4B-212ENST00000624683 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
KDM4B-212ENST00000624683 SHROOM4Q9ULL8 1493 aa24.06■■□□□ 1.44
KDM4B-212ENST00000624683 EHMT2Q96KQ7 1210 aa23.2■■□□□ 1.3
KDM4B-212ENST00000624683 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
KDM4B-212ENST00000624683 APLP2Q06481 763 aa22.72■■□□□ 1.23
KDM4B-212ENST00000624683 PELP1Q8IZL8 1130 aaKnown RBP22.59■■□□□ 1.21
KDM4B-212ENST00000624683 PCGF6Q9BYE7 350 aa22.58■■□□□ 1.21
KDM4B-212ENST00000624683 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
KDM4B-212ENST00000624683 TTBK1Q5TCY1 1321 aaPredicted RBP22.41■■□□□ 1.18
KDM4B-212ENST00000624683 RANGAP1P46060 587 aaPredicted RBP22.22■■□□□ 1.15
KDM4B-212ENST00000624683 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
KDM4B-212ENST00000624683 ZEB1P37275 1124 aaPredicted RBP22.14■■□□□ 1.14
KDM4B-212ENST00000624683 CCER1Q8TC90 406 aaPredicted RBP22.06■■□□□ 1.12
KDM4B-212ENST00000624683 ATP1B4Q9UN42 357 aaPredicted RBP21.95■■□□□ 1.1
KDM4B-212ENST00000624683 CHIC1Q5VXU3 224 aa21.94■■□□□ 1.1
KDM4B-212ENST00000624683 CENPBP07199 599 aaPredicted RBP21.92■■□□□ 1.1
KDM4B-212ENST00000624683 TRIM26Q12899 539 aaPredicted RBP21.8■■□□□ 1.08
KDM4B-212ENST00000624683 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
KDM4B-212ENST00000624683 LOC105371045A0A1W2PR82 267 aa21.76■■□□□ 1.07
KDM4B-212ENST00000624683 ABCC9O60706 1549 aa21.63■■□□□ 1.05
KDM4B-212ENST00000624683 HRCP23327 699 aa21.56■■□□□ 1.04
KDM4B-212ENST00000624683 ERICH6Q7L0X2 663 aa21.47■■□□□ 1.03
KDM4B-212ENST00000624683 MYT1Q01538 1121 aa21.45■■□□□ 1.02
KDM4B-212ENST00000624683 PABPN1Q86U42 306 aaKnown RBP eCLIP21.4■■□□□ 1.02
KDM4B-212ENST00000624683 YTHDC1Q96MU7 727 aaKnown RBP21.36■■□□□ 1.01
KDM4B-212ENST00000624683 ITGAEP38570 1179 aa21.33■■□□□ 1.01
KDM4B-212ENST00000624683 HNRNPUL2Q1KMD3 747 aaKnown RBP21.3■■□□□ 1
KDM4B-212ENST00000624683 NEFLP07196 543 aa21.3■■□□□ 1
KDM4B-212ENST00000624683 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
KDM4B-212ENST00000624683 ZCCHC6Q5VYS8 1495 aaKnown RBP21.17■□□□□ 0.98
KDM4B-212ENST00000624683 CCDC180Q9P1Z9 1646 aa20.97■□□□□ 0.95
KDM4B-212ENST00000624683 SCRIBQ14160 1630 aa20.93■□□□□ 0.94
KDM4B-212ENST00000624683 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
KDM4B-212ENST00000624683 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
KDM4B-212ENST00000624683 POLR3GLQ9BT43 218 aa20.88■□□□□ 0.93
KDM4B-212ENST00000624683 DIEXFQ68CQ4 756 aaKnown RBP20.85■□□□□ 0.93
KDM4B-212ENST00000624683 CSRNP3Q8WYN3 585 aa20.84■□□□□ 0.93
KDM4B-212ENST00000624683 TRIM52Q96A61 297 aa20.68■□□□□ 0.9
KDM4B-212ENST00000624683 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
KDM4B-212ENST00000624683 NEUROD1Q13562 356 aa20.65■□□□□ 0.9
KDM4B-212ENST00000624683 P3H3Q8IVL6 736 aa20.56■□□□□ 0.88
KDM4B-212ENST00000624683 DAXXQ9UER7 740 aaPredicted RBP20.56■□□□□ 0.88
KDM4B-212ENST00000624683 FBLN2P98095 1184 aa20.54■□□□□ 0.88
KDM4B-212ENST00000624683 DCAF1Q9Y4B6 1507 aa20.53■□□□□ 0.88
KDM4B-212ENST00000624683 ZNF316A6NFI3 1004 aaPredicted RBP20.49■□□□□ 0.87
KDM4B-212ENST00000624683 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
KDM4B-212ENST00000624683 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
KDM4B-212ENST00000624683 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
KDM4B-212ENST00000624683 ARID3CA6NKF2 412 aa20.37■□□□□ 0.85
KDM4B-212ENST00000624683 ANP32CO43423 234 aa20.37■□□□□ 0.85
KDM4B-212ENST00000624683 ZNF326Q5BKZ1 582 aaKnown RBP20.36■□□□□ 0.85
KDM4B-212ENST00000624683 NACADO15069 1562 aa20.31■□□□□ 0.84
KDM4B-212ENST00000624683 GTF3C3Q9Y5Q9 886 aa20.3■□□□□ 0.84
KDM4B-212ENST00000624683 CDK11AQ9UQ88 783 aaPredicted RBP20.27■□□□□ 0.83
KDM4B-212ENST00000624683 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
KDM4B-212ENST00000624683 RTL5Q5HYW3 569 aaPredicted RBP20.23■□□□□ 0.83
KDM4B-212ENST00000624683 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
KDM4B-212ENST00000624683 BCANQ96GW7 911 aa20.15■□□□□ 0.82
KDM4B-212ENST00000624683 CLIP1P30622 1438 aa20.14■□□□□ 0.81
KDM4B-212ENST00000624683 EEA1Q15075 1411 aa20.14■□□□□ 0.81
KDM4B-212ENST00000624683 ACIN1Q9UKV3 1341 aaKnown RBP20.13■□□□□ 0.81
KDM4B-212ENST00000624683 CLSPNQ9HAW4 1339 aa20.08■□□□□ 0.81
KDM4B-212ENST00000624683 TONSLQ96HA7 1378 aa20.08■□□□□ 0.81
KDM4B-212ENST00000624683 WRNQ14191 1432 aaPredicted RBP eCLIP20.06■□□□□ 0.8
KDM4B-212ENST00000624683 GOLGA3Q08378 1498 aa20.06■□□□□ 0.8
KDM4B-212ENST00000624683 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
KDM4B-212ENST00000624683 CEP162Q5TB80 1403 aa20.04■□□□□ 0.8
KDM4B-212ENST00000624683 BAZ1AQ9NRL2 1556 aaPredicted RBP20.01■□□□□ 0.79
KDM4B-212ENST00000624683 CECR2Q9BXF3 1484 aa19.99■□□□□ 0.79
KDM4B-212ENST00000624683 MTUS2Q5JR59 1369 aa19.97■□□□□ 0.79
KDM4B-212ENST00000624683 CHIC2Q9UKJ5 165 aa19.97■□□□□ 0.79
KDM4B-212ENST00000624683 TNIKQ9UKE5 1360 aa19.93■□□□□ 0.78
KDM4B-212ENST00000624683 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
KDM4B-212ENST00000624683 CEP164Q9UPV0 1460 aa19.88■□□□□ 0.77
KDM4B-212ENST00000624683 KIF27Q86VH2 1401 aa19.88■□□□□ 0.77
KDM4B-212ENST00000624683 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
KDM4B-212ENST00000624683 TSPY4P0CV99 314 aa19.81■□□□□ 0.76
KDM4B-212ENST00000624683 TSPY10P0CW01 314 aa19.81■□□□□ 0.76
KDM4B-212ENST00000624683 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
KDM4B-212ENST00000624683 CANXP27824 592 aaKnown RBP19.79■□□□□ 0.76
KDM4B-212ENST00000624683 HNRNPUQ00839 825 aaKnown RBP eCLIP19.77■□□□□ 0.76
KDM4B-212ENST00000624683 NEFMP07197 916 aa19.76■□□□□ 0.75
KDM4B-212ENST00000624683 MROH2BQ7Z745 1585 aa19.75■□□□□ 0.75
KDM4B-212ENST00000624683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.751e-9■□□□□ 10
KDM4B-212ENST00000624683 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
KDM4B-212ENST00000624683 FKBP8Q14318 412 aa19.74■□□□□ 0.75
KDM4B-212ENST00000624683 RRP7BPQ9NSQ0 103 aa19.73■□□□□ 0.75
KDM4B-212ENST00000624683 FAM9BQ8IZU0 186 aa19.72■□□□□ 0.75
KDM4B-212ENST00000624683 MIER1Q8N108 512 aa19.72■□□□□ 0.75
KDM4B-212ENST00000624683 ZBTB47Q9UFB7 747 aaPredicted RBP19.71■□□□□ 0.75
KDM4B-212ENST00000624683 SOGA1O94964 1423 aa19.69■□□□□ 0.74
KDM4B-212ENST00000624683 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
KDM4B-212ENST00000624683 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
KDM4B-212ENST00000624683 CCDC88BA6NC98 1476 aa19.66■□□□□ 0.74
KDM4B-212ENST00000624683 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
KDM4B-212ENST00000624683 HIRIP3Q9BW71 556 aaPredicted RBP19.65■□□□□ 0.74
KDM4B-212ENST00000624683 PLEKHD1A6NEE1 506 aa19.64■□□□□ 0.73
KDM4B-212ENST00000624683 STAG3Q9UJ98 1225 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms