RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.254e-8■■■■■ 149.1
KDM4B-212ENST00000624683 SF3B1O75533 1304 aaKnown RBP eCLIP14.71□□□□□ -0.053e-6■■■■■ 80.4
KDM4B-212ENST00000624683 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.18■□□□□ 0.181e-9■■■■■ 44.3
KDM4B-212ENST00000624683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.12■□□□□ 0.499e-7■■■■■ 39.6
KDM4B-212ENST00000624683 SF3B4Q15427 424 aaKnown RBP eCLIP13.31□□□□□ -0.281e-8■■■■■ 32.5
KDM4B-212ENST00000624683 NOLC1Q14978 699 aaKnown RBP eCLIP16.54■□□□□ 0.248e-7■■■■□ 24.6
KDM4B-212ENST00000624683 NONOQ15233 471 aaKnown RBP eCLIP16.29■□□□□ 0.22e-7■■■■□ 23.7
KDM4B-212ENST00000624683 SMNDC1O75940 238 aaKnown RBP eCLIP14.6□□□□□ -0.077e-8■■■■□ 23.6
KDM4B-212ENST00000624683 EFTUD2Q15029 972 aaKnown RBP eCLIP15.12■□□□□ 0.012e-6■■■■□ 22.5
KDM4B-212ENST00000624683 AQRO60306 1485 aaKnown RBP eCLIP18.52■□□□□ 0.551e-6■■■■□ 21
KDM4B-212ENST00000624683 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.58□□□□□ -0.231e-6■■■■□ 20.4
KDM4B-212ENST00000624683 EWSR1Q01844 656 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■□□ 19.1
KDM4B-212ENST00000624683 PPIGQ13427 754 aaKnown RBP eCLIP14.34□□□□□ -0.113e-7■■■□□ 18.4
KDM4B-212ENST00000624683 CSTF2P33240 577 aaKnown RBP eCLIP13.98□□□□□ -0.172e-8■■■□□ 18.4
KDM4B-212ENST00000624683 LSM11P83369 360 aaKnown RBP eCLIP12.94□□□□□ -0.349e-7■■■□□ 16.4
KDM4B-212ENST00000624683 YWHAGP61981 247 aaKnown RBP eCLIP15.62■□□□□ 0.091e-6■■■□□ 15.2
KDM4B-212ENST00000624683 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.51■□□□□ 0.076e-11■■□□□ 13.6
KDM4B-212ENST00000624683 RBM15Q96T37 977 aaKnown RBP eCLIP15.28■□□□□ 0.046e-7■■□□□ 13.2
KDM4B-212ENST00000624683 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.52■□□□□ 0.239e-8■■□□□ 12.5
KDM4B-212ENST00000624683 RBM22Q9NW64 420 aaKnown RBP eCLIP14.91□□□□□ -0.024e-6■■□□□ 12
KDM4B-212ENST00000624683 ZNF622Q969S3 477 aaKnown RBP eCLIP16.62■□□□□ 0.256e-8■□□□□ 10.3
KDM4B-212ENST00000624683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.751e-9■□□□□ 10
KDM4B-212ENST00000624683 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.545e-7■□□□□ 8.1
Retrieved 23 of 23 RNA–protein pairs in 6.1 ms