RNA–Protein interactions for RNA: ENST00000624100.1

AP003499.2-201, humanhuman

BASIC

Gene AP003499.2, Length 483 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003499.2-201ENST00000624100 AEBP2Q6ZN18 517 aaPredicted RBP27.66■■■□□ 2.02
AP003499.2-201ENST00000624100 CHIC1Q5VXU3 224 aa26.37■■□□□ 1.81
AP003499.2-201ENST00000624100 SENP3Q9H4L4 574 aaPredicted RBP23.68■■□□□ 1.38
AP003499.2-201ENST00000624100 PHF23Q9BUL5 403 aaPredicted RBP23.33■■□□□ 1.33
AP003499.2-201ENST00000624100 FOXD1Q16676 465 aa22.01■■□□□ 1.11
AP003499.2-201ENST00000624100 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
AP003499.2-201ENST00000624100 MSH5O43196 834 aa20.64■□□□□ 0.89
AP003499.2-201ENST00000624100 PIAS4Q8N2W9 510 aaPredicted RBP20.63■□□□□ 0.89
AP003499.2-201ENST00000624100 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
AP003499.2-201ENST00000624100 ADRA2BP18089 450 aa20.55■□□□□ 0.88
AP003499.2-201ENST00000624100 POTEDQ86YR6 584 aa19.99■□□□□ 0.79
AP003499.2-201ENST00000624100 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
AP003499.2-201ENST00000624100 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
AP003499.2-201ENST00000624100 DMRT2Q9Y5R5 561 aa18.76■□□□□ 0.59
AP003499.2-201ENST00000624100 PPP4R3CPQ6ZMV5 832 aa18.51■□□□□ 0.55
AP003499.2-201ENST00000624100 CNKSR2Q8WXI2 1034 aa18.17■□□□□ 0.5
AP003499.2-201ENST00000624100 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
AP003499.2-201ENST00000624100 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
AP003499.2-201ENST00000624100 RNF216Q9NWF9 866 aaPredicted RBP17.98■□□□□ 0.47
AP003499.2-201ENST00000624100 NCBP3Q53F19 620 aaKnown RBP17.87■□□□□ 0.45
AP003499.2-201ENST00000624100 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
AP003499.2-201ENST00000624100 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
AP003499.2-201ENST00000624100 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
AP003499.2-201ENST00000624100 DNAJC5BQ9UF47 199 aa17.46■□□□□ 0.39
AP003499.2-201ENST00000624100 C1QBPQ07021 282 aaKnown RBP17.35■□□□□ 0.37
AP003499.2-201ENST00000624100 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.36
AP003499.2-201ENST00000624100 KCNA4P22459 653 aa17.25■□□□□ 0.35
AP003499.2-201ENST00000624100 U3KPZ7 1027 aaPredicted RBP16.88■□□□□ 0.29
AP003499.2-201ENST00000624100 SLC4A2P04920 1241 aa16.72■□□□□ 0.27
AP003499.2-201ENST00000624100 CAPN15O75808 1086 aa16.63■□□□□ 0.25
AP003499.2-201ENST00000624100 SPINK5Q9NQ38 1064 aaPredicted RBP16.6■□□□□ 0.25
AP003499.2-201ENST00000624100 APLP2Q06481 763 aa16.52■□□□□ 0.24
AP003499.2-201ENST00000624100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.49■□□□□ 0.23
AP003499.2-201ENST00000624100 HNRNPUL2Q1KMD3 747 aaKnown RBP16.49■□□□□ 0.23
AP003499.2-201ENST00000624100 DSG3P32926 999 aa16.47■□□□□ 0.23
AP003499.2-201ENST00000624100 SAMD1Q6SPF0 538 aaPredicted RBP16.39■□□□□ 0.21
AP003499.2-201ENST00000624100 TRHP20396 242 aaPredicted RBP16.37■□□□□ 0.21
AP003499.2-201ENST00000624100 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
AP003499.2-201ENST00000624100 SLC4A1APQ9BWU0 796 aaKnown RBP16.34■□□□□ 0.21
AP003499.2-201ENST00000624100 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
AP003499.2-201ENST00000624100 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
AP003499.2-201ENST00000624100 ABCB7O75027 752 aa16.22■□□□□ 0.19
AP003499.2-201ENST00000624100 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
AP003499.2-201ENST00000624100 POLA2Q14181 598 aa15.93■□□□□ 0.14
AP003499.2-201ENST00000624100 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
AP003499.2-201ENST00000624100 ZBTB22O15209 634 aa15.83■□□□□ 0.12
AP003499.2-201ENST00000624100 ATF5Q9Y2D1 282 aaPredicted RBP15.81■□□□□ 0.12
AP003499.2-201ENST00000624100 RBM42Q9BTD8 480 aaKnown RBP15.79■□□□□ 0.12
AP003499.2-201ENST00000624100 POTEHQ6S545 545 aa15.7■□□□□ 0.1
AP003499.2-201ENST00000624100 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
AP003499.2-201ENST00000624100 ATXN8OSP0DMR3 200 aa15.63■□□□□ 0.09
AP003499.2-201ENST00000624100 OSCARQ8IYS5 282 aa15.42■□□□□ 0.06
AP003499.2-201ENST00000624100 AKT1S1Q96B36 256 aa15.41■□□□□ 0.06
AP003499.2-201ENST00000624100 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
AP003499.2-201ENST00000624100 FBLN2P98095 1184 aa15.3■□□□□ 0.04
AP003499.2-201ENST00000624100 REM2Q8IYK8 340 aaPredicted RBP15.23■□□□□ 0.03
AP003499.2-201ENST00000624100 SPDYE2BA6NHP3 402 aa15.16■□□□□ 0.02
AP003499.2-201ENST00000624100 SPDYE6P0CI01 402 aa15.16■□□□□ 0.02
AP003499.2-201ENST00000624100 SPDYE2Q495Y8 402 aa15.16■□□□□ 0.02
AP003499.2-201ENST00000624100 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
AP003499.2-201ENST00000624100 PITPNM1O00562 1244 aa15.08■□□□□ 0
AP003499.2-201ENST00000624100 PIP4P2Q8N4L2 257 aa15□□□□□ -0.01
AP003499.2-201ENST00000624100 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
AP003499.2-201ENST00000624100 FXR2P51116 673 aaKnown RBP eCLIP14.92□□□□□ -0.02
AP003499.2-201ENST00000624100 SSUH2Q9Y2M2 353 aa14.92□□□□□ -0.02
AP003499.2-201ENST00000624100 SPDYE1Q8NFV5 336 aaPredicted RBP14.89□□□□□ -0.03
AP003499.2-201ENST00000624100 CLEC11AQ9Y240 323 aa14.86□□□□□ -0.03
AP003499.2-201ENST00000624100 HAX1O00165 279 aa14.76□□□□□ -0.05
AP003499.2-201ENST00000624100 PABPN1Q86U42 306 aaKnown RBP eCLIP14.75□□□□□ -0.05
AP003499.2-201ENST00000624100 SP7Q8TDD2 431 aaPredicted RBP14.75□□□□□ -0.05
AP003499.2-201ENST00000624100 PRKAR2AP13861 404 aaKnown RBP14.7□□□□□ -0.06
AP003499.2-201ENST00000624100 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
AP003499.2-201ENST00000624100 CHADLQ6NUI6 762 aa14.52□□□□□ -0.09
AP003499.2-201ENST00000624100 EVX2Q03828 476 aa14.49□□□□□ -0.09
AP003499.2-201ENST00000624100 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
AP003499.2-201ENST00000624100 C19orf67A6NJJ6 358 aa14.44□□□□□ -0.1
AP003499.2-201ENST00000624100 STAG3Q9UJ98 1225 aa14.4□□□□□ -0.1
AP003499.2-201ENST00000624100 FARP1Q9Y4F1 1045 aaPredicted RBP14.34□□□□□ -0.11
AP003499.2-201ENST00000624100 FKBP8Q14318 412 aa14.31□□□□□ -0.12
AP003499.2-201ENST00000624100 CD44P16070 742 aaKnown RBP14.26□□□□□ -0.13
AP003499.2-201ENST00000624100 GABBR2O75899 941 aa14.21□□□□□ -0.13
AP003499.2-201ENST00000624100 CREBZFQ9NS37 354 aa14.21□□□□□ -0.13
AP003499.2-201ENST00000624100 CLCN6P51797 869 aa14.08□□□□□ -0.16
AP003499.2-201ENST00000624100 AMER1Q5JTC6 1135 aaPredicted RBP14.08□□□□□ -0.16
AP003499.2-201ENST00000624100 PROM2Q8N271 834 aa14.08□□□□□ -0.16
AP003499.2-201ENST00000624100 RTN4Q9NQC3 1192 aaKnown RBP14.06□□□□□ -0.16
AP003499.2-201ENST00000624100 ZRANB1Q9UGI0 708 aa14.05□□□□□ -0.16
AP003499.2-201ENST00000624100 NPM1P06748 294 aaKnown RBP eCLIP14.04□□□□□ -0.16
AP003499.2-201ENST00000624100 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
AP003499.2-201ENST00000624100 ZNF579Q8NAF0 562 aaKnown RBP14.02□□□□□ -0.17
AP003499.2-201ENST00000624100 MNX1P50219 401 aaPredicted RBP13.95□□□□□ -0.18
AP003499.2-201ENST00000624100 DCBLD2Q96PD2 775 aa13.9□□□□□ -0.18
AP003499.2-201ENST00000624100 PLEKHG5O94827 1062 aa13.87□□□□□ -0.19
AP003499.2-201ENST00000624100 POTEIP0CG38 1075 aa13.87□□□□□ -0.19
AP003499.2-201ENST00000624100 PHF12Q96QT6 1004 aa13.84□□□□□ -0.19
AP003499.2-201ENST00000624100 LHX8Q68G74 356 aa13.83□□□□□ -0.2
AP003499.2-201ENST00000624100 GALR2O43603 387 aaPredicted RBP13.82□□□□□ -0.2
AP003499.2-201ENST00000624100 MIER1Q8N108 512 aa13.81□□□□□ -0.2
AP003499.2-201ENST00000624100 TSPYL2Q9H2G4 693 aaPredicted RBP13.75□□□□□ -0.21
AP003499.2-201ENST00000624100 PLCD3Q8N3E9 789 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 670.3 ms