RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 AEBP2Q6ZN18 517 aaPredicted RBP8.5□□□□□ -1.05
AP000648.3-201ENST00000623539 CHIC1Q5VXU3 224 aa8.46□□□□□ -1.05
AP000648.3-201ENST00000623539 SENP3Q9H4L4 574 aaPredicted RBP7.43□□□□□ -1.22
AP000648.3-201ENST00000623539 PHF23Q9BUL5 403 aaPredicted RBP7.28□□□□□ -1.24
AP000648.3-201ENST00000623539 PLPPR3Q6T4P5 718 aa6.81□□□□□ -1.32
AP000648.3-201ENST00000623539 FOXD1Q16676 465 aa6.72□□□□□ -1.33
AP000648.3-201ENST00000623539 MSH5O43196 834 aa6.47□□□□□ -1.37
AP000648.3-201ENST00000623539 PPP6R1Q9UPN7 881 aa6.27□□□□□ -1.41
AP000648.3-201ENST00000623539 DNAJC5BQ9UF47 199 aa6.24□□□□□ -1.41
AP000648.3-201ENST00000623539 ADRA2BP18089 450 aa6.19□□□□□ -1.42
AP000648.3-201ENST00000623539 PIAS4Q8N2W9 510 aaPredicted RBP6.18□□□□□ -1.42
AP000648.3-201ENST00000623539 SCAF1Q9H7N4 1312 aaKnown RBP6.04□□□□□ -1.44
AP000648.3-201ENST00000623539 DMRT2Q9Y5R5 561 aa5.98□□□□□ -1.45
AP000648.3-201ENST00000623539 HOXD11P31277 338 aaPredicted RBP5.91□□□□□ -1.46
AP000648.3-201ENST00000623539 CNKSR2Q8WXI2 1034 aa5.89□□□□□ -1.47
AP000648.3-201ENST00000623539 PPP4R3CPQ6ZMV5 832 aa5.88□□□□□ -1.47
AP000648.3-201ENST00000623539 RNF216Q9NWF9 866 aaPredicted RBP5.87□□□□□ -1.47
AP000648.3-201ENST00000623539 NCBP3Q53F19 620 aaKnown RBP5.86□□□□□ -1.47
AP000648.3-201ENST00000623539 POTEDQ86YR6 584 aa5.77□□□□□ -1.49
AP000648.3-201ENST00000623539 NPM3O75607 178 aaKnown RBP5.6□□□□□ -1.51
AP000648.3-201ENST00000623539 MAPK8IP2Q13387 824 aaPredicted RBP5.59□□□□□ -1.51
AP000648.3-201ENST00000623539 C1QBPQ07021 282 aaKnown RBP5.48□□□□□ -1.53
AP000648.3-201ENST00000623539 KCNA4P22459 653 aa5.47□□□□□ -1.53
AP000648.3-201ENST00000623539 RNF39Q9H2S5 420 aa5.47□□□□□ -1.53
AP000648.3-201ENST00000623539 APLP2Q06481 763 aa5.45□□□□□ -1.54
AP000648.3-201ENST00000623539 ATXN8OSP0DMR3 200 aa5.45□□□□□ -1.54
AP000648.3-201ENST00000623539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.4□□□□□ -1.54
AP000648.3-201ENST00000623539 HNRNPUL2Q1KMD3 747 aaKnown RBP5.4□□□□□ -1.54
AP000648.3-201ENST00000623539 SLC4A2P04920 1241 aa5.33□□□□□ -1.56
AP000648.3-201ENST00000623539 MYCNP04198 464 aaPredicted RBP5.31□□□□□ -1.56
AP000648.3-201ENST00000623539 SAMD1Q6SPF0 538 aaPredicted RBP5.31□□□□□ -1.56
AP000648.3-201ENST00000623539 FOXD4L1Q9NU39 408 aa5.29□□□□□ -1.56
AP000648.3-201ENST00000623539 SLC4A1APQ9BWU0 796 aaKnown RBP5.28□□□□□ -1.56
AP000648.3-201ENST00000623539 U3KPZ7 1027 aaPredicted RBP5.26□□□□□ -1.57
AP000648.3-201ENST00000623539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.2□□□□□ -1.58
AP000648.3-201ENST00000623539 ZNF219Q9P2Y4 722 aaPredicted RBP5.18□□□□□ -1.58
AP000648.3-201ENST00000623539 ZBTB12Q9Y330 459 aaPredicted RBP5.15□□□□□ -1.58
AP000648.3-201ENST00000623539 DSG3P32926 999 aa5.09□□□□□ -1.59
AP000648.3-201ENST00000623539 ZBTB22O15209 634 aa5.08□□□□□ -1.6
AP000648.3-201ENST00000623539 CACNB1Q02641 598 aaPredicted RBP5.07□□□□□ -1.6
AP000648.3-201ENST00000623539 CSRNP3Q8WYN3 585 aa5.04□□□□□ -1.6
AP000648.3-201ENST00000623539 DCAF8L1A6NGE4 600 aa5.03□□□□□ -1.6
AP000648.3-201ENST00000623539 PROM2Q8N271 834 aa4.98□□□□□ -1.61
AP000648.3-201ENST00000623539 RBM42Q9BTD8 480 aaKnown RBP4.96□□□□□ -1.62
AP000648.3-201ENST00000623539 AKT1S1Q96B36 256 aa4.92□□□□□ -1.62
AP000648.3-201ENST00000623539 SPINK5Q9NQ38 1064 aaPredicted RBP4.91□□□□□ -1.62
AP000648.3-201ENST00000623539 SSUH2Q9Y2M2 353 aa4.91□□□□□ -1.62
AP000648.3-201ENST00000623539 SPDYE2BA6NHP3 402 aa4.9□□□□□ -1.63
AP000648.3-201ENST00000623539 SPDYE6P0CI01 402 aa4.9□□□□□ -1.63
AP000648.3-201ENST00000623539 SPDYE2Q495Y8 402 aa4.9□□□□□ -1.63
AP000648.3-201ENST00000623539 ATF5Q9Y2D1 282 aaPredicted RBP4.9□□□□□ -1.63
AP000648.3-201ENST00000623539 FBLN2P98095 1184 aa4.87□□□□□ -1.63
AP000648.3-201ENST00000623539 CAPN15O75808 1086 aa4.87□□□□□ -1.63
AP000648.3-201ENST00000623539 CLCN6P51797 869 aa4.83□□□□□ -1.64
AP000648.3-201ENST00000623539 POLA2Q14181 598 aa4.82□□□□□ -1.64
AP000648.3-201ENST00000623539 MKRN4PQ13434 485 aaPredicted RBP4.81□□□□□ -1.64
AP000648.3-201ENST00000623539 STAG3Q9UJ98 1225 aa4.78□□□□□ -1.64
AP000648.3-201ENST00000623539 FXR2P51116 673 aaKnown RBP eCLIP4.75□□□□□ -1.65
AP000648.3-201ENST00000623539 TRHP20396 242 aaPredicted RBP4.74□□□□□ -1.65
AP000648.3-201ENST00000623539 SPDYE1Q8NFV5 336 aaPredicted RBP4.69□□□□□ -1.66
AP000648.3-201ENST00000623539 REM2Q8IYK8 340 aaPredicted RBP4.69□□□□□ -1.66
AP000648.3-201ENST00000623539 ABCB7O75027 752 aa4.64□□□□□ -1.67
AP000648.3-201ENST00000623539 SPDYE4A6NLX3 237 aa4.62□□□□□ -1.67
AP000648.3-201ENST00000623539 EHMT2Q96KQ7 1210 aa4.62□□□□□ -1.67
AP000648.3-201ENST00000623539 ZNF692Q9BU19 519 aaPredicted RBP4.6□□□□□ -1.67
AP000648.3-201ENST00000623539 FBXO3Q9UK99 471 aa4.6□□□□□ -1.67
AP000648.3-201ENST00000623539 OSCARQ8IYS5 282 aa4.6□□□□□ -1.67
AP000648.3-201ENST00000623539 C19orf67A6NJJ6 358 aa4.59□□□□□ -1.68
AP000648.3-201ENST00000623539 SGIP1Q9BQI5 828 aa4.59□□□□□ -1.68
AP000648.3-201ENST00000623539 CHRM1P11229 460 aaPredicted RBP4.58□□□□□ -1.68
AP000648.3-201ENST00000623539 PITPNM1O00562 1244 aa4.58□□□□□ -1.68
AP000648.3-201ENST00000623539 CHRDL2Q6WN34 429 aa4.58□□□□□ -1.68
AP000648.3-201ENST00000623539 ZBTB47Q9UFB7 747 aaPredicted RBP4.56□□□□□ -1.68
AP000648.3-201ENST00000623539 MNX1P50219 401 aaPredicted RBP4.55□□□□□ -1.68
AP000648.3-201ENST00000623539 PIP4P2Q8N4L2 257 aa4.55□□□□□ -1.68
AP000648.3-201ENST00000623539 CREBZFQ9NS37 354 aa4.55□□□□□ -1.68
AP000648.3-201ENST00000623539 TRIM41Q8WV44 630 aa4.54□□□□□ -1.68
AP000648.3-201ENST00000623539 POTEHQ6S545 545 aa4.52□□□□□ -1.69
AP000648.3-201ENST00000623539 NPM1P06748 294 aaKnown RBP eCLIP4.51□□□□□ -1.69
AP000648.3-201ENST00000623539 PABPN1Q86U42 306 aaKnown RBP eCLIP4.51□□□□□ -1.69
AP000648.3-201ENST00000623539 ZNF579Q8NAF0 562 aaKnown RBP4.5□□□□□ -1.69
AP000648.3-201ENST00000623539 DNAJC5Q9H3Z4 198 aa4.5□□□□□ -1.69
AP000648.3-201ENST00000623539 PRR29P0C7W0 189 aa4.46□□□□□ -1.7
AP000648.3-201ENST00000623539 FARP1Q9Y4F1 1045 aaPredicted RBP4.45□□□□□ -1.7
AP000648.3-201ENST00000623539 NUBP1P53384 320 aa4.43□□□□□ -1.7
AP000648.3-201ENST00000623539 GSE1Q14687 1217 aa4.41□□□□□ -1.7
AP000648.3-201ENST00000623539 ILDR1Q86SU0 546 aaPredicted RBP4.41□□□□□ -1.7
AP000648.3-201ENST00000623539 PLEKHG5O94827 1062 aa4.4□□□□□ -1.71
AP000648.3-201ENST00000623539 SP7Q8TDD2 431 aaPredicted RBP4.4□□□□□ -1.71
AP000648.3-201ENST00000623539 PRKAR2AP13861 404 aaKnown RBP4.39□□□□□ -1.71
AP000648.3-201ENST00000623539 VASPP50552 380 aaPredicted RBP4.38□□□□□ -1.71
AP000648.3-201ENST00000623539 FKBP8Q14318 412 aa4.37□□□□□ -1.71
AP000648.3-201ENST00000623539 IER5LQ5T953 404 aa4.36□□□□□ -1.71
AP000648.3-201ENST00000623539 CCDC61Q9Y6R9 512 aa4.35□□□□□ -1.71
AP000648.3-201ENST00000623539 SPOCK2Q92563 424 aa4.35□□□□□ -1.71
AP000648.3-201ENST00000623539 TIE1P35590 1138 aa4.34□□□□□ -1.71
AP000648.3-201ENST00000623539 ASTLQ6HA08 431 aaPredicted RBP4.34□□□□□ -1.72
AP000648.3-201ENST00000623539 TAOK2Q9UL54 1235 aa4.33□□□□□ -1.72
AP000648.3-201ENST00000623539 PAK3O75914 559 aaPredicted RBP4.31□□□□□ -1.72
AP000648.3-201ENST00000623539 KIF12Q96FN5 646 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms