RNA–Protein interactions for RNA: ENST00000622977.1

AC004232.3-201, humanhuman

BASIC

Gene AC004232.3, Length 525 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004232.3-201ENST00000622977 AEBP2Q6ZN18 517 aaPredicted RBP25.41■■□□□ 1.66
AC004232.3-201ENST00000622977 CHIC1Q5VXU3 224 aa24.91■■□□□ 1.58
AC004232.3-201ENST00000622977 PHF23Q9BUL5 403 aaPredicted RBP21.88■■□□□ 1.09
AC004232.3-201ENST00000622977 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
AC004232.3-201ENST00000622977 PLPPR3Q6T4P5 718 aa20.27■□□□□ 0.84
AC004232.3-201ENST00000622977 FOXD1Q16676 465 aa20■□□□□ 0.79
AC004232.3-201ENST00000622977 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
AC004232.3-201ENST00000622977 ADRA2BP18089 450 aa19.25■□□□□ 0.67
AC004232.3-201ENST00000622977 PIAS4Q8N2W9 510 aaPredicted RBP18.87■□□□□ 0.61
AC004232.3-201ENST00000622977 MSH5O43196 834 aa18.47■□□□□ 0.55
AC004232.3-201ENST00000622977 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
AC004232.3-201ENST00000622977 SCAF1Q9H7N4 1312 aaKnown RBP17.69■□□□□ 0.42
AC004232.3-201ENST00000622977 KCNA4P22459 653 aa17.46■□□□□ 0.39
AC004232.3-201ENST00000622977 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
AC004232.3-201ENST00000622977 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
AC004232.3-201ENST00000622977 CNKSR2Q8WXI2 1034 aa17.36■□□□□ 0.37
AC004232.3-201ENST00000622977 DMRT2Q9Y5R5 561 aa17.25■□□□□ 0.35
AC004232.3-201ENST00000622977 NPM3O75607 178 aaKnown RBP17.13■□□□□ 0.33
AC004232.3-201ENST00000622977 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
AC004232.3-201ENST00000622977 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
AC004232.3-201ENST00000622977 DNAJC5BQ9UF47 199 aa16.73■□□□□ 0.27
AC004232.3-201ENST00000622977 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
AC004232.3-201ENST00000622977 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
AC004232.3-201ENST00000622977 DCAF8L1A6NGE4 600 aa16.42■□□□□ 0.22
AC004232.3-201ENST00000622977 EHMT2Q96KQ7 1210 aa16.18■□□□□ 0.18
AC004232.3-201ENST00000622977 SLC4A2P04920 1241 aa16.16■□□□□ 0.18
AC004232.3-201ENST00000622977 FOXD4L1Q9NU39 408 aa16.1■□□□□ 0.17
AC004232.3-201ENST00000622977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.16
AC004232.3-201ENST00000622977 ZBTB22O15209 634 aa16.05■□□□□ 0.16
AC004232.3-201ENST00000622977 CSRNP3Q8WYN3 585 aa16.04■□□□□ 0.16
AC004232.3-201ENST00000622977 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
AC004232.3-201ENST00000622977 U3KPZ7 1027 aaPredicted RBP15.84■□□□□ 0.13
AC004232.3-201ENST00000622977 RNF39Q9H2S5 420 aa15.81■□□□□ 0.12
AC004232.3-201ENST00000622977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.71■□□□□ 0.11
AC004232.3-201ENST00000622977 HNRNPUL2Q1KMD3 747 aaKnown RBP15.71■□□□□ 0.11
AC004232.3-201ENST00000622977 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
AC004232.3-201ENST00000622977 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
AC004232.3-201ENST00000622977 ATXN8OSP0DMR3 200 aa15.57■□□□□ 0.08
AC004232.3-201ENST00000622977 APLP2Q06481 763 aa15.55■□□□□ 0.08
AC004232.3-201ENST00000622977 ATF5Q9Y2D1 282 aaPredicted RBP15.37■□□□□ 0.05
AC004232.3-201ENST00000622977 SPINK5Q9NQ38 1064 aaPredicted RBP15.35■□□□□ 0.05
AC004232.3-201ENST00000622977 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
AC004232.3-201ENST00000622977 CAPN15O75808 1086 aa15.3■□□□□ 0.04
AC004232.3-201ENST00000622977 ZNF219Q9P2Y4 722 aaPredicted RBP15.3■□□□□ 0.04
AC004232.3-201ENST00000622977 TRHP20396 242 aaPredicted RBP15.23■□□□□ 0.03
AC004232.3-201ENST00000622977 DSG3P32926 999 aa15.06■□□□□ 0
AC004232.3-201ENST00000622977 POLA2Q14181 598 aa15.01□□□□□ -0.01
AC004232.3-201ENST00000622977 ABCB7O75027 752 aa14.99□□□□□ -0.01
AC004232.3-201ENST00000622977 ZBTB12Q9Y330 459 aaPredicted RBP14.83□□□□□ -0.04
AC004232.3-201ENST00000622977 FBLN2P98095 1184 aa14.77□□□□□ -0.05
AC004232.3-201ENST00000622977 MKRN4PQ13434 485 aaPredicted RBP14.72□□□□□ -0.05
AC004232.3-201ENST00000622977 OSCARQ8IYS5 282 aa14.49□□□□□ -0.09
AC004232.3-201ENST00000622977 FKBP8Q14318 412 aa14.48□□□□□ -0.09
AC004232.3-201ENST00000622977 SPDYE2BA6NHP3 402 aa14.43□□□□□ -0.1
AC004232.3-201ENST00000622977 SPDYE4A6NLX3 237 aa14.43□□□□□ -0.1
AC004232.3-201ENST00000622977 SPDYE6P0CI01 402 aa14.43□□□□□ -0.1
AC004232.3-201ENST00000622977 SPDYE2Q495Y8 402 aa14.43□□□□□ -0.1
AC004232.3-201ENST00000622977 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
AC004232.3-201ENST00000622977 ZNF692Q9BU19 519 aaPredicted RBP14.34□□□□□ -0.11
AC004232.3-201ENST00000622977 SSUH2Q9Y2M2 353 aa14.31□□□□□ -0.12
AC004232.3-201ENST00000622977 PROM2Q8N271 834 aa14.25□□□□□ -0.13
AC004232.3-201ENST00000622977 AKT1S1Q96B36 256 aa14.21□□□□□ -0.13
AC004232.3-201ENST00000622977 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
AC004232.3-201ENST00000622977 REM2Q8IYK8 340 aaPredicted RBP14.04□□□□□ -0.16
AC004232.3-201ENST00000622977 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
AC004232.3-201ENST00000622977 SPDYE1Q8NFV5 336 aaPredicted RBP13.98□□□□□ -0.17
AC004232.3-201ENST00000622977 STAG3Q9UJ98 1225 aa13.98□□□□□ -0.17
AC004232.3-201ENST00000622977 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
AC004232.3-201ENST00000622977 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
AC004232.3-201ENST00000622977 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
AC004232.3-201ENST00000622977 PRR29P0C7W0 189 aa13.77□□□□□ -0.21
AC004232.3-201ENST00000622977 CHRDL2Q6WN34 429 aa13.72□□□□□ -0.21
AC004232.3-201ENST00000622977 MIER1Q8N108 512 aa13.66□□□□□ -0.22
AC004232.3-201ENST00000622977 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
AC004232.3-201ENST00000622977 FXR2P51116 673 aaKnown RBP eCLIP13.64□□□□□ -0.23
AC004232.3-201ENST00000622977 PLEKHG5O94827 1062 aa13.63□□□□□ -0.23
AC004232.3-201ENST00000622977 CREBZFQ9NS37 354 aa13.61□□□□□ -0.23
AC004232.3-201ENST00000622977 IFNLR1Q8IU57 520 aaPredicted RBP13.58□□□□□ -0.24
AC004232.3-201ENST00000622977 PIP4P2Q8N4L2 257 aa13.56□□□□□ -0.24
AC004232.3-201ENST00000622977 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
AC004232.3-201ENST00000622977 PRKAR2AP13861 404 aaKnown RBP13.52□□□□□ -0.25
AC004232.3-201ENST00000622977 CHADLQ6NUI6 762 aa13.51□□□□□ -0.25
AC004232.3-201ENST00000622977 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
AC004232.3-201ENST00000622977 MNX1P50219 401 aaPredicted RBP13.49□□□□□ -0.25
AC004232.3-201ENST00000622977 SPOCK2Q92563 424 aa13.43□□□□□ -0.26
AC004232.3-201ENST00000622977 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
AC004232.3-201ENST00000622977 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
AC004232.3-201ENST00000622977 AMER1Q5JTC6 1135 aaPredicted RBP13.34□□□□□ -0.27
AC004232.3-201ENST00000622977 NUBP1P53384 320 aa13.33□□□□□ -0.28
AC004232.3-201ENST00000622977 POTEHQ6S545 545 aa13.23□□□□□ -0.29
AC004232.3-201ENST00000622977 RASEFQ8IZ41 740 aa13.23□□□□□ -0.29
AC004232.3-201ENST00000622977 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
AC004232.3-201ENST00000622977 RTN4Q9NQC3 1192 aaKnown RBP13.23□□□□□ -0.29
AC004232.3-201ENST00000622977 GSE1Q14687 1217 aa13.22□□□□□ -0.29
AC004232.3-201ENST00000622977 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
AC004232.3-201ENST00000622977 CIZ1Q9ULV3 898 aaPredicted RBP13.18□□□□□ -0.3
AC004232.3-201ENST00000622977 C19orf67A6NJJ6 358 aa13.16□□□□□ -0.3
AC004232.3-201ENST00000622977 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
AC004232.3-201ENST00000622977 PKD2Q13563 968 aa13.15□□□□□ -0.3
AC004232.3-201ENST00000622977 CD44P16070 742 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms