RNA–Protein interactions for RNA: ENST00000622143.1

SRSF4-207, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-207ENST00000622143 AEBP2Q6ZN18 517 aaPredicted RBP20.8■□□□□ 0.92
SRSF4-207ENST00000622143 CHIC1Q5VXU3 224 aa19.63■□□□□ 0.73
SRSF4-207ENST00000622143 POTEDQ86YR6 584 aa17.88■□□□□ 0.45
SRSF4-207ENST00000622143 SENP3Q9H4L4 574 aaPredicted RBP17.66■□□□□ 0.42
SRSF4-207ENST00000622143 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
SRSF4-207ENST00000622143 FOXD1Q16676 465 aa16.8■□□□□ 0.28
SRSF4-207ENST00000622143 MSH5O43196 834 aa15.97■□□□□ 0.15
SRSF4-207ENST00000622143 PLPPR3Q6T4P5 718 aa15.77■□□□□ 0.12
SRSF4-207ENST00000622143 PIAS4Q8N2W9 510 aaPredicted RBP15.32■□□□□ 0.04
SRSF4-207ENST00000622143 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
SRSF4-207ENST00000622143 ADRA2BP18089 450 aa15.25■□□□□ 0.03
SRSF4-207ENST00000622143 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
SRSF4-207ENST00000622143 MAPK8IP2Q13387 824 aaPredicted RBP13.94□□□□□ -0.18
SRSF4-207ENST00000622143 DMRT2Q9Y5R5 561 aa13.88□□□□□ -0.19
SRSF4-207ENST00000622143 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
SRSF4-207ENST00000622143 SCAF1Q9H7N4 1312 aaKnown RBP13.87□□□□□ -0.19
SRSF4-207ENST00000622143 POTEHQ6S545 545 aa13.72□□□□□ -0.21
SRSF4-207ENST00000622143 RNF39Q9H2S5 420 aa13.64□□□□□ -0.23
SRSF4-207ENST00000622143 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
SRSF4-207ENST00000622143 DCAF8L1A6NGE4 600 aa13.41□□□□□ -0.26
SRSF4-207ENST00000622143 HOXD11P31277 338 aaPredicted RBP13.41□□□□□ -0.26
SRSF4-207ENST00000622143 NCBP3Q53F19 620 aaKnown RBP13.37□□□□□ -0.27
SRSF4-207ENST00000622143 RNF216Q9NWF9 866 aaPredicted RBP13.35□□□□□ -0.27
SRSF4-207ENST00000622143 KCNA4P22459 653 aa13.27□□□□□ -0.29
SRSF4-207ENST00000622143 NPM3O75607 178 aaKnown RBP13.26□□□□□ -0.29
SRSF4-207ENST00000622143 C1QBPQ07021 282 aaKnown RBP13.25□□□□□ -0.29
SRSF4-207ENST00000622143 DNAJC5BQ9UF47 199 aa12.99□□□□□ -0.33
SRSF4-207ENST00000622143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.68□□□□□ -0.385e-7■■□□□ 14.1
SRSF4-207ENST00000622143 SLC4A2P04920 1241 aa12.63□□□□□ -0.39
SRSF4-207ENST00000622143 SLC4A1APQ9BWU0 796 aaKnown RBP12.54□□□□□ -0.4
SRSF4-207ENST00000622143 U3KPZ7 1027 aaPredicted RBP12.54□□□□□ -0.4
SRSF4-207ENST00000622143 NISCHQ9Y2I1 1504 aa12.48□□□□□ -0.41
SRSF4-207ENST00000622143 DSG3P32926 999 aa12.39□□□□□ -0.43
SRSF4-207ENST00000622143 ZBTB22O15209 634 aa12.26□□□□□ -0.45
SRSF4-207ENST00000622143 SP7Q8TDD2 431 aaPredicted RBP12.26□□□□□ -0.45
SRSF4-207ENST00000622143 FOXD4L1Q9NU39 408 aa12.26□□□□□ -0.45
SRSF4-207ENST00000622143 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
SRSF4-207ENST00000622143 MYCNP04198 464 aaPredicted RBP12.23□□□□□ -0.45
SRSF4-207ENST00000622143 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.19□□□□□ -0.46
SRSF4-207ENST00000622143 HNRNPUL2Q1KMD3 747 aaKnown RBP12.19□□□□□ -0.46
SRSF4-207ENST00000622143 SAMD1Q6SPF0 538 aaPredicted RBP12.16□□□□□ -0.46
SRSF4-207ENST00000622143 CAPN15O75808 1086 aa12.14□□□□□ -0.47
SRSF4-207ENST00000622143 EHMT2Q96KQ7 1210 aa12.14□□□□□ -0.47
SRSF4-207ENST00000622143 APLP2Q06481 763 aa12.1□□□□□ -0.47
SRSF4-207ENST00000622143 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
SRSF4-207ENST00000622143 ZNF219Q9P2Y4 722 aaPredicted RBP12.03□□□□□ -0.48
SRSF4-207ENST00000622143 TRHP20396 242 aaPredicted RBP12.02□□□□□ -0.49
SRSF4-207ENST00000622143 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
SRSF4-207ENST00000622143 ABCB7O75027 752 aa11.92□□□□□ -0.5
SRSF4-207ENST00000622143 CSRNP3Q8WYN3 585 aa11.92□□□□□ -0.5
SRSF4-207ENST00000622143 ATXN8OSP0DMR3 200 aa11.87□□□□□ -0.51
SRSF4-207ENST00000622143 ABCC9O60706 1549 aa11.86□□□□□ -0.51
SRSF4-207ENST00000622143 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
SRSF4-207ENST00000622143 POLA2Q14181 598 aa11.8□□□□□ -0.52
SRSF4-207ENST00000622143 RBM42Q9BTD8 480 aaKnown RBP11.63□□□□□ -0.55
SRSF4-207ENST00000622143 HAX1O00165 279 aa11.61□□□□□ -0.55
SRSF4-207ENST00000622143 EVX2Q03828 476 aa11.59□□□□□ -0.55
SRSF4-207ENST00000622143 ZBTB12Q9Y330 459 aaPredicted RBP11.56□□□□□ -0.56
SRSF4-207ENST00000622143 PIP4P2Q8N4L2 257 aa11.54□□□□□ -0.56
SRSF4-207ENST00000622143 LHX8Q68G74 356 aa11.49□□□□□ -0.57
SRSF4-207ENST00000622143 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
SRSF4-207ENST00000622143 OSCARQ8IYS5 282 aa11.42□□□□□ -0.58
SRSF4-207ENST00000622143 FBLN2P98095 1184 aa11.37□□□□□ -0.59
SRSF4-207ENST00000622143 CCDC180Q9P1Z9 1646 aa11.32□□□□□ -0.6
SRSF4-207ENST00000622143 AKT1S1Q96B36 256 aa11.28□□□□□ -0.6
SRSF4-207ENST00000622143 SPDYE2BA6NHP3 402 aa11.26□□□□□ -0.61
SRSF4-207ENST00000622143 SPDYE6P0CI01 402 aa11.26□□□□□ -0.61
SRSF4-207ENST00000622143 SPDYE2Q495Y8 402 aa11.26□□□□□ -0.61
SRSF4-207ENST00000622143 FXR2P51116 673 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■■□□□ 14.2
SRSF4-207ENST00000622143 REM2Q8IYK8 340 aaPredicted RBP11.2□□□□□ -0.62
SRSF4-207ENST00000622143 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
SRSF4-207ENST00000622143 PITPNM1O00562 1244 aa11.13□□□□□ -0.63
SRSF4-207ENST00000622143 ZNF692Q9BU19 519 aaPredicted RBP11.13□□□□□ -0.63
SRSF4-207ENST00000622143 GABBR2O75899 941 aa11.09□□□□□ -0.63
SRSF4-207ENST00000622143 RB1CC1Q8TDY2 1594 aa11□□□□□ -0.65
SRSF4-207ENST00000622143 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
SRSF4-207ENST00000622143 SPDYE4A6NLX3 237 aa10.98□□□□□ -0.65
SRSF4-207ENST00000622143 POTEIP0CG38 1075 aa10.96□□□□□ -0.65
SRSF4-207ENST00000622143 SPDYE1Q8NFV5 336 aaPredicted RBP10.96□□□□□ -0.65
SRSF4-207ENST00000622143 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
SRSF4-207ENST00000622143 POTEMA6NI47 508 aa10.91□□□□□ -0.66
SRSF4-207ENST00000622143 CLEC11AQ9Y240 323 aa10.89□□□□□ -0.67
SRSF4-207ENST00000622143 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
SRSF4-207ENST00000622143 PROM2Q8N271 834 aa10.87□□□□□ -0.67
SRSF4-207ENST00000622143 POTEGQ6S5H5 508 aa10.83□□□□□ -0.68
SRSF4-207ENST00000622143 UNC13AQ9UPW8 1703 aa10.81□□□□□ -0.68
SRSF4-207ENST00000622143 PRKAR2AP13861 404 aaKnown RBP10.79□□□□□ -0.68
SRSF4-207ENST00000622143 NACADO15069 1562 aa10.78□□□□□ -0.68
SRSF4-207ENST00000622143 PRR29P0C7W0 189 aa10.77□□□□□ -0.69
SRSF4-207ENST00000622143 FKBP8Q14318 412 aa10.75□□□□□ -0.69
SRSF4-207ENST00000622143 OTUD5Q96G74 571 aa10.73□□□□□ -0.69
SRSF4-207ENST00000622143 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
SRSF4-207ENST00000622143 BICRAQ9NZM4 1560 aa10.73□□□□□ -0.69
SRSF4-207ENST00000622143 CHADLQ6NUI6 762 aa10.71□□□□□ -0.69
SRSF4-207ENST00000622143 DNAJC5Q9H3Z4 198 aa10.7□□□□□ -0.7
SRSF4-207ENST00000622143 CECR2Q9BXF3 1484 aa10.66□□□□□ -0.7
SRSF4-207ENST00000622143 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
SRSF4-207ENST00000622143 CC2D2AQ9P2K1 1620 aa10.63□□□□□ -0.71
SRSF4-207ENST00000622143 POTEB2H3BUK9 544 aa10.61□□□□□ -0.71
SRSF4-207ENST00000622143 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms