RNA–Protein interactions for RNA: ENST00000621363.1

PACRG-211, Transcript of parkin coregulated, humanhuman

TSL 5 BASIC

Gene PACRG, Length 360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-211ENST00000621363 AEBP2Q6ZN18 517 aaPredicted RBP18.4■□□□□ 0.54
PACRG-211ENST00000621363 CHIC1Q5VXU3 224 aa18.14■□□□□ 0.49
PACRG-211ENST00000621363 PHF23Q9BUL5 403 aaPredicted RBP16.05■□□□□ 0.16
PACRG-211ENST00000621363 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
PACRG-211ENST00000621363 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
PACRG-211ENST00000621363 FOXD1Q16676 465 aa14.39□□□□□ -0.11
PACRG-211ENST00000621363 PPP6R1Q9UPN7 881 aa14.11□□□□□ -0.15
PACRG-211ENST00000621363 ADRA2BP18089 450 aa14.09□□□□□ -0.15
PACRG-211ENST00000621363 PIAS4Q8N2W9 510 aaPredicted RBP13.6□□□□□ -0.23
PACRG-211ENST00000621363 KCNA4P22459 653 aa13.17□□□□□ -0.3
PACRG-211ENST00000621363 PPP4R3CPQ6ZMV5 832 aa13.13□□□□□ -0.31
PACRG-211ENST00000621363 MSH5O43196 834 aa13.06□□□□□ -0.32
PACRG-211ENST00000621363 NCBP3Q53F19 620 aaKnown RBP12.78□□□□□ -0.36
PACRG-211ENST00000621363 SCAF1Q9H7N4 1312 aaKnown RBP12.73□□□□□ -0.37
PACRG-211ENST00000621363 MAPK8IP2Q13387 824 aaPredicted RBP12.73□□□□□ -0.37
PACRG-211ENST00000621363 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
PACRG-211ENST00000621363 CNKSR2Q8WXI2 1034 aa12.65□□□□□ -0.38
PACRG-211ENST00000621363 EHMT2Q96KQ7 1210 aa12.53□□□□□ -0.4
PACRG-211ENST00000621363 SLC4A1APQ9BWU0 796 aaKnown RBP12.53□□□□□ -0.4
PACRG-211ENST00000621363 DMRT2Q9Y5R5 561 aa12.4□□□□□ -0.42
PACRG-211ENST00000621363 RNF216Q9NWF9 866 aaPredicted RBP12.34□□□□□ -0.43
PACRG-211ENST00000621363 CSRNP3Q8WYN3 585 aa12.26□□□□□ -0.45
PACRG-211ENST00000621363 HOXD11P31277 338 aaPredicted RBP12.24□□□□□ -0.45
PACRG-211ENST00000621363 DNAJC5BQ9UF47 199 aa12.18□□□□□ -0.46
PACRG-211ENST00000621363 ZBTB22O15209 634 aa12.16□□□□□ -0.46
PACRG-211ENST00000621363 FOXD4L1Q9NU39 408 aa11.97□□□□□ -0.49
PACRG-211ENST00000621363 SLC4A2P04920 1241 aa11.95□□□□□ -0.5
PACRG-211ENST00000621363 DCAF8L1A6NGE4 600 aa11.88□□□□□ -0.51
PACRG-211ENST00000621363 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
PACRG-211ENST00000621363 MYCNP04198 464 aaPredicted RBP11.65□□□□□ -0.54
PACRG-211ENST00000621363 U3KPZ7 1027 aaPredicted RBP11.54□□□□□ -0.56
PACRG-211ENST00000621363 POTEDQ86YR6 584 aa11.53□□□□□ -0.56
PACRG-211ENST00000621363 ATXN8OSP0DMR3 200 aa11.47□□□□□ -0.57
PACRG-211ENST00000621363 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
PACRG-211ENST00000621363 SAMD1Q6SPF0 538 aaPredicted RBP11.37□□□□□ -0.59
PACRG-211ENST00000621363 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
PACRG-211ENST00000621363 HNRNPUL2Q1KMD3 747 aaKnown RBP11.36□□□□□ -0.59
PACRG-211ENST00000621363 RNF39Q9H2S5 420 aa11.27□□□□□ -0.61
PACRG-211ENST00000621363 SPINK5Q9NQ38 1064 aaPredicted RBP11.18□□□□□ -0.62
PACRG-211ENST00000621363 ZNF219Q9P2Y4 722 aaPredicted RBP11.16□□□□□ -0.62
PACRG-211ENST00000621363 APLP2Q06481 763 aa11.14□□□□□ -0.63
PACRG-211ENST00000621363 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
PACRG-211ENST00000621363 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
PACRG-211ENST00000621363 CAPN15O75808 1086 aa11.07□□□□□ -0.64
PACRG-211ENST00000621363 FKBP8Q14318 412 aa11.05□□□□□ -0.64
PACRG-211ENST00000621363 POLA2Q14181 598 aa10.98□□□□□ -0.65
PACRG-211ENST00000621363 ABCB7O75027 752 aa10.94□□□□□ -0.66
PACRG-211ENST00000621363 MKRN4PQ13434 485 aaPredicted RBP10.94□□□□□ -0.66
PACRG-211ENST00000621363 DSG3P32926 999 aa10.83□□□□□ -0.68
PACRG-211ENST00000621363 FBLN2P98095 1184 aa10.81□□□□□ -0.68
PACRG-211ENST00000621363 CACNB1Q02641 598 aaPredicted RBP10.79□□□□□ -0.68
PACRG-211ENST00000621363 SPDYE4A6NLX3 237 aa10.76□□□□□ -0.69
PACRG-211ENST00000621363 ZBTB12Q9Y330 459 aaPredicted RBP10.7□□□□□ -0.7
PACRG-211ENST00000621363 PROM2Q8N271 834 aa10.62□□□□□ -0.71
PACRG-211ENST00000621363 OSCARQ8IYS5 282 aa10.6□□□□□ -0.71
PACRG-211ENST00000621363 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
PACRG-211ENST00000621363 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
PACRG-211ENST00000621363 SPDYE2BA6NHP3 402 aa10.48□□□□□ -0.73
PACRG-211ENST00000621363 SPDYE6P0CI01 402 aa10.48□□□□□ -0.73
PACRG-211ENST00000621363 SPDYE2Q495Y8 402 aa10.48□□□□□ -0.73
PACRG-211ENST00000621363 FBXO3Q9UK99 471 aa10.48□□□□□ -0.73
PACRG-211ENST00000621363 SSUH2Q9Y2M2 353 aa10.47□□□□□ -0.73
PACRG-211ENST00000621363 AMER1Q5JTC6 1135 aaPredicted RBP10.45□□□□□ -0.74
PACRG-211ENST00000621363 VASPP50552 380 aaPredicted RBP10.41□□□□□ -0.74
PACRG-211ENST00000621363 PABPN1Q86U42 306 aaKnown RBP eCLIP10.41□□□□□ -0.74
PACRG-211ENST00000621363 IFNLR1Q8IU57 520 aaPredicted RBP10.33□□□□□ -0.76
PACRG-211ENST00000621363 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
PACRG-211ENST00000621363 RBM42Q9BTD8 480 aaKnown RBP10.21□□□□□ -0.77
PACRG-211ENST00000621363 AKT1S1Q96B36 256 aa10.19□□□□□ -0.78
PACRG-211ENST00000621363 MIER1Q8N108 512 aa10.18□□□□□ -0.78
PACRG-211ENST00000621363 PLCD3Q8N3E9 789 aa10.18□□□□□ -0.78
PACRG-211ENST00000621363 KLHL34Q8N239 644 aa10.16□□□□□ -0.78
PACRG-211ENST00000621363 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
PACRG-211ENST00000621363 SPDYE1Q8NFV5 336 aaPredicted RBP10.11□□□□□ -0.79
PACRG-211ENST00000621363 CLEC11AQ9Y240 323 aa10.11□□□□□ -0.79
PACRG-211ENST00000621363 SPOCK2Q92563 424 aa10.1□□□□□ -0.79
PACRG-211ENST00000621363 PKD2Q13563 968 aa10.08□□□□□ -0.8
PACRG-211ENST00000621363 PITPNM1O00562 1244 aa10.04□□□□□ -0.8
PACRG-211ENST00000621363 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
PACRG-211ENST00000621363 PLEKHG5O94827 1062 aa10□□□□□ -0.81
PACRG-211ENST00000621363 CREBZFQ9NS37 354 aa10□□□□□ -0.81
PACRG-211ENST00000621363 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
PACRG-211ENST00000621363 MNX1P50219 401 aaPredicted RBP9.94□□□□□ -0.82
PACRG-211ENST00000621363 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
PACRG-211ENST00000621363 DCAF8L2P0C7V8 631 aa9.93□□□□□ -0.82
PACRG-211ENST00000621363 CIZ1Q9ULV3 898 aaPredicted RBP9.93□□□□□ -0.82
PACRG-211ENST00000621363 NUBP1P53384 320 aa9.91□□□□□ -0.82
PACRG-211ENST00000621363 SLC24A1O60721 1099 aa9.89□□□□□ -0.83
PACRG-211ENST00000621363 RGL2O15211 777 aa9.88□□□□□ -0.83
PACRG-211ENST00000621363 CHADLQ6NUI6 762 aa9.87□□□□□ -0.83
PACRG-211ENST00000621363 DCAF8Q5TAQ9 597 aa9.82□□□□□ -0.84
PACRG-211ENST00000621363 RASEFQ8IZ41 740 aa9.82□□□□□ -0.84
PACRG-211ENST00000621363 NPM1P06748 294 aaKnown RBP eCLIP9.79□□□□□ -0.84
PACRG-211ENST00000621363 GSE1Q14687 1217 aa9.79□□□□□ -0.84
PACRG-211ENST00000621363 PRKAR2AP13861 404 aaKnown RBP9.77□□□□□ -0.85
PACRG-211ENST00000621363 FXR2P51116 673 aaKnown RBP eCLIP9.77□□□□□ -0.85
PACRG-211ENST00000621363 CHRDL2Q6WN34 429 aa9.77□□□□□ -0.85
PACRG-211ENST00000621363 RNF25Q96BH1 459 aaPredicted RBP9.76□□□□□ -0.85
PACRG-211ENST00000621363 FAM212AQ96EL1 285 aa9.76□□□□□ -0.85
PACRG-211ENST00000621363 FARP1Q9Y4F1 1045 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms