RNA–Protein interactions for RNA: ENST00000621110.4

AC159540.2-201, humanhuman

TSL 3 BASIC

Gene AC159540.2, Length 754 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC159540.2-201ENST00000621110 AEBP2Q6ZN18 517 aaPredicted RBP29.81■■■□□ 2.36
AC159540.2-201ENST00000621110 CHIC1Q5VXU3 224 aa28.9■■■□□ 2.22
AC159540.2-201ENST00000621110 PHF23Q9BUL5 403 aaPredicted RBP25.42■■□□□ 1.66
AC159540.2-201ENST00000621110 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
AC159540.2-201ENST00000621110 FOXD1Q16676 465 aa23.51■■□□□ 1.35
AC159540.2-201ENST00000621110 PLPPR3Q6T4P5 718 aa23.36■■□□□ 1.33
AC159540.2-201ENST00000621110 PPP6R1Q9UPN7 881 aa22.48■■□□□ 1.19
AC159540.2-201ENST00000621110 ADRA2BP18089 450 aa22.4■■□□□ 1.18
AC159540.2-201ENST00000621110 PIAS4Q8N2W9 510 aaPredicted RBP22.06■■□□□ 1.12
AC159540.2-201ENST00000621110 MSH5O43196 834 aa21.74■■□□□ 1.07
AC159540.2-201ENST00000621110 PPP4R3CPQ6ZMV5 832 aa20.55■□□□□ 0.88
AC159540.2-201ENST00000621110 SCAF1Q9H7N4 1312 aaKnown RBP20.49■□□□□ 0.87
AC159540.2-201ENST00000621110 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
AC159540.2-201ENST00000621110 DMRT2Q9Y5R5 561 aa20.18■□□□□ 0.82
AC159540.2-201ENST00000621110 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
AC159540.2-201ENST00000621110 CNKSR2Q8WXI2 1034 aa20.04■□□□□ 0.8
AC159540.2-201ENST00000621110 NCBP3Q53F19 620 aaKnown RBP19.92■□□□□ 0.78
AC159540.2-201ENST00000621110 KCNA4P22459 653 aa19.83■□□□□ 0.77
AC159540.2-201ENST00000621110 HOXD11P31277 338 aaPredicted RBP19.71■□□□□ 0.75
AC159540.2-201ENST00000621110 RNF216Q9NWF9 866 aaPredicted RBP19.71■□□□□ 0.75
AC159540.2-201ENST00000621110 NPM3O75607 178 aaKnown RBP19.67■□□□□ 0.74
AC159540.2-201ENST00000621110 DNAJC5BQ9UF47 199 aa19.27■□□□□ 0.68
AC159540.2-201ENST00000621110 DCAF8L1A6NGE4 600 aa19.16■□□□□ 0.66
AC159540.2-201ENST00000621110 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
AC159540.2-201ENST00000621110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.66■□□□□ 0.58
AC159540.2-201ENST00000621110 SLC4A2P04920 1241 aa18.65■□□□□ 0.58
AC159540.2-201ENST00000621110 RNF39Q9H2S5 420 aa18.65■□□□□ 0.58
AC159540.2-201ENST00000621110 U3KPZ7 1027 aaPredicted RBP18.42■□□□□ 0.54
AC159540.2-201ENST00000621110 C1QBPQ07021 282 aaKnown RBP18.39■□□□□ 0.53
AC159540.2-201ENST00000621110 FOXD4L1Q9NU39 408 aa18.31■□□□□ 0.52
AC159540.2-201ENST00000621110 ZBTB22O15209 634 aa18.28■□□□□ 0.52
AC159540.2-201ENST00000621110 CACNB1Q02641 598 aaPredicted RBP18.22■□□□□ 0.51
AC159540.2-201ENST00000621110 MYCNP04198 464 aaPredicted RBP18.16■□□□□ 0.5
AC159540.2-201ENST00000621110 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.08■□□□□ 0.48
AC159540.2-201ENST00000621110 HNRNPUL2Q1KMD3 747 aaKnown RBP18.08■□□□□ 0.48
AC159540.2-201ENST00000621110 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
AC159540.2-201ENST00000621110 CSRNP3Q8WYN3 585 aa18■□□□□ 0.47
AC159540.2-201ENST00000621110 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
AC159540.2-201ENST00000621110 SPINK5Q9NQ38 1064 aaPredicted RBP17.93■□□□□ 0.46
AC159540.2-201ENST00000621110 APLP2Q06481 763 aa17.92■□□□□ 0.46
AC159540.2-201ENST00000621110 CAPN15O75808 1086 aa17.82■□□□□ 0.44
AC159540.2-201ENST00000621110 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
AC159540.2-201ENST00000621110 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
AC159540.2-201ENST00000621110 ATF5Q9Y2D1 282 aaPredicted RBP17.72■□□□□ 0.43
AC159540.2-201ENST00000621110 TRHP20396 242 aaPredicted RBP17.68■□□□□ 0.42
AC159540.2-201ENST00000621110 DSG3P32926 999 aa17.66■□□□□ 0.42
AC159540.2-201ENST00000621110 ABCB7O75027 752 aa17.46■□□□□ 0.39
AC159540.2-201ENST00000621110 POLA2Q14181 598 aa17.4■□□□□ 0.38
AC159540.2-201ENST00000621110 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
AC159540.2-201ENST00000621110 MKRN4PQ13434 485 aaPredicted RBP16.95■□□□□ 0.3
AC159540.2-201ENST00000621110 FBLN2P98095 1184 aa16.92■□□□□ 0.3
AC159540.2-201ENST00000621110 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
AC159540.2-201ENST00000621110 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
AC159540.2-201ENST00000621110 SPDYE2BA6NHP3 402 aa16.64■□□□□ 0.25
AC159540.2-201ENST00000621110 SPDYE6P0CI01 402 aa16.64■□□□□ 0.25
AC159540.2-201ENST00000621110 SPDYE2Q495Y8 402 aa16.64■□□□□ 0.25
AC159540.2-201ENST00000621110 AKT1S1Q96B36 256 aa16.57■□□□□ 0.24
AC159540.2-201ENST00000621110 SSUH2Q9Y2M2 353 aa16.53■□□□□ 0.24
AC159540.2-201ENST00000621110 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
AC159540.2-201ENST00000621110 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
AC159540.2-201ENST00000621110 REM2Q8IYK8 340 aaPredicted RBP16.4■□□□□ 0.22
AC159540.2-201ENST00000621110 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC159540.2-201ENST00000621110 PROM2Q8N271 834 aa16.23■□□□□ 0.19
AC159540.2-201ENST00000621110 PITPNM1O00562 1244 aa16.21■□□□□ 0.19
AC159540.2-201ENST00000621110 FKBP8Q14318 412 aa16.21■□□□□ 0.19
AC159540.2-201ENST00000621110 CHRDL2Q6WN34 429 aa16.18■□□□□ 0.18
AC159540.2-201ENST00000621110 SPDYE1Q8NFV5 336 aaPredicted RBP16.17■□□□□ 0.18
AC159540.2-201ENST00000621110 CLEC11AQ9Y240 323 aa16.05■□□□□ 0.16
AC159540.2-201ENST00000621110 SLC24A1O60721 1099 aa16■□□□□ 0.15
AC159540.2-201ENST00000621110 FXR2P51116 673 aaKnown RBP eCLIP16■□□□□ 0.15
AC159540.2-201ENST00000621110 STAG3Q9UJ98 1225 aa15.99■□□□□ 0.15
AC159540.2-201ENST00000621110 PIP4P2Q8N4L2 257 aa15.95■□□□□ 0.14
AC159540.2-201ENST00000621110 PRR29P0C7W0 189 aa15.92■□□□□ 0.14
AC159540.2-201ENST00000621110 POTEHQ6S545 545 aa15.91■□□□□ 0.14
AC159540.2-201ENST00000621110 PRKAR2AP13861 404 aaKnown RBP15.77■□□□□ 0.12
AC159540.2-201ENST00000621110 CREBZFQ9NS37 354 aa15.73■□□□□ 0.11
AC159540.2-201ENST00000621110 FBXO3Q9UK99 471 aa15.72■□□□□ 0.11
AC159540.2-201ENST00000621110 CHADLQ6NUI6 762 aa15.71■□□□□ 0.11
AC159540.2-201ENST00000621110 FARP1Q9Y4F1 1045 aaPredicted RBP15.59■□□□□ 0.09
AC159540.2-201ENST00000621110 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
AC159540.2-201ENST00000621110 MIER1Q8N108 512 aa15.55■□□□□ 0.08
AC159540.2-201ENST00000621110 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
AC159540.2-201ENST00000621110 PLCD3Q8N3E9 789 aa15.49■□□□□ 0.07
AC159540.2-201ENST00000621110 PLEKHG5O94827 1062 aa15.46■□□□□ 0.07
AC159540.2-201ENST00000621110 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
AC159540.2-201ENST00000621110 HAX1O00165 279 aa15.42■□□□□ 0.06
AC159540.2-201ENST00000621110 NPM1P06748 294 aaKnown RBP eCLIP15.41■□□□□ 0.06
AC159540.2-201ENST00000621110 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
AC159540.2-201ENST00000621110 RTN4Q9NQC3 1192 aaKnown RBP15.38■□□□□ 0.05
AC159540.2-201ENST00000621110 ZBTB47Q9UFB7 747 aaPredicted RBP15.37■□□□□ 0.05
AC159540.2-201ENST00000621110 EVX2Q03828 476 aa15.36■□□□□ 0.05
AC159540.2-201ENST00000621110 CD44P16070 742 aaKnown RBP15.31■□□□□ 0.04
AC159540.2-201ENST00000621110 IFNLR1Q8IU57 520 aaPredicted RBP15.31■□□□□ 0.04
AC159540.2-201ENST00000621110 NUBP1P53384 320 aa15.26■□□□□ 0.03
AC159540.2-201ENST00000621110 NISCHQ9Y2I1 1504 aa15.22■□□□□ 0.03
AC159540.2-201ENST00000621110 RASEFQ8IZ41 740 aa15.21■□□□□ 0.03
AC159540.2-201ENST00000621110 KLHL34Q8N239 644 aa15.21■□□□□ 0.03
AC159540.2-201ENST00000621110 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
AC159540.2-201ENST00000621110 ZRANB1Q9UGI0 708 aa15.18■□□□□ 0.02
AC159540.2-201ENST00000621110 PAK3O75914 559 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 212.2 ms