RNA–Protein interactions for RNA: ENST00000620879.4

GTF2I-218, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2I, Length 4,352 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-218ENST00000620879 DCAF8L2P0C7V8 631 aa22.4■■□□□ 1.18
GTF2I-218ENST00000620879 NISCHQ9Y2I1 1504 aa22.39■■□□□ 1.18
GTF2I-218ENST00000620879 SUPT5HO00267 1087 aaKnown RBP21.16■□□□□ 0.98
GTF2I-218ENST00000620879 SHROOM4Q9ULL8 1493 aa21.13■□□□□ 0.97
GTF2I-218ENST00000620879 EHMT2Q96KQ7 1210 aa20.32■□□□□ 0.84
GTF2I-218ENST00000620879 FAM9AQ8IZU1 332 aaPredicted RBP19.91■□□□□ 0.78
GTF2I-218ENST00000620879 TRIM41Q8WV44 630 aa19.52■□□□□ 0.72
GTF2I-218ENST00000620879 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
GTF2I-218ENST00000620879 RANGAP1P46060 587 aaPredicted RBP19.47■□□□□ 0.71
GTF2I-218ENST00000620879 APLP2Q06481 763 aa19.38■□□□□ 0.69
GTF2I-218ENST00000620879 ABCC9O60706 1549 aa19.37■□□□□ 0.69
GTF2I-218ENST00000620879 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
GTF2I-218ENST00000620879 UBTFP17480 764 aaKnown RBP19.18■□□□□ 0.66
GTF2I-218ENST00000620879 PABPN1Q86U42 306 aaKnown RBP eCLIP19.17■□□□□ 0.66
GTF2I-218ENST00000620879 ATP1B4Q9UN42 357 aaPredicted RBP19.09■□□□□ 0.65
GTF2I-218ENST00000620879 PPARGC1BQ86YN6 1023 aaKnown RBP19.03■□□□□ 0.64
GTF2I-218ENST00000620879 CHIC1Q5VXU3 224 aa19.02■□□□□ 0.64
GTF2I-218ENST00000620879 LOC105371045A0A1W2PR82 267 aa18.98■□□□□ 0.63
GTF2I-218ENST00000620879 CCER1Q8TC90 406 aaPredicted RBP18.77■□□□□ 0.6
GTF2I-218ENST00000620879 ITGAEP38570 1179 aa18.54■□□□□ 0.56
GTF2I-218ENST00000620879 ZCCHC6Q5VYS8 1495 aaKnown RBP18.54■□□□□ 0.56
GTF2I-218ENST00000620879 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
GTF2I-218ENST00000620879 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
GTF2I-218ENST00000620879 HNRNPUL2Q1KMD3 747 aaKnown RBP18.49■□□□□ 0.55
GTF2I-218ENST00000620879 ZEB1P37275 1124 aaPredicted RBP18.45■□□□□ 0.54
GTF2I-218ENST00000620879 SCRIBQ14160 1630 aa18.43■□□□□ 0.54
GTF2I-218ENST00000620879 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
GTF2I-218ENST00000620879 MYT1LQ9UL68 1186 aa18.2■□□□□ 0.5
GTF2I-218ENST00000620879 HRCP23327 699 aa18.18■□□□□ 0.5
GTF2I-218ENST00000620879 FBLN2P98095 1184 aa18.17■□□□□ 0.5
GTF2I-218ENST00000620879 YTHDC1Q96MU7 727 aaKnown RBP18.14■□□□□ 0.49
GTF2I-218ENST00000620879 CSRNP3Q8WYN3 585 aa18.12■□□□□ 0.49
GTF2I-218ENST00000620879 P3H3Q8IVL6 736 aa18.09■□□□□ 0.49
GTF2I-218ENST00000620879 CENPBP07199 599 aaPredicted RBP18.06■□□□□ 0.48
GTF2I-218ENST00000620879 FAM50AQ14320 339 aaKnown RBP18.06■□□□□ 0.48
GTF2I-218ENST00000620879 PELP1Q8IZL8 1130 aaKnown RBP18.05■□□□□ 0.48
GTF2I-218ENST00000620879 ARID3CA6NKF2 412 aa18.01■□□□□ 0.47
GTF2I-218ENST00000620879 POLR3GLQ9BT43 218 aa17.98■□□□□ 0.47
GTF2I-218ENST00000620879 CNGB1Q14028 1251 aaPredicted RBP17.95■□□□□ 0.46
GTF2I-218ENST00000620879 RB1CC1Q8TDY2 1594 aa17.94■□□□□ 0.46
GTF2I-218ENST00000620879 RSF1Q96T23 1441 aaPredicted RBP17.92■□□□□ 0.46
GTF2I-218ENST00000620879 TRIM52Q96A61 297 aa17.83■□□□□ 0.44
GTF2I-218ENST00000620879 NACADO15069 1562 aa17.82■□□□□ 0.44
GTF2I-218ENST00000620879 NEUROD1Q13562 356 aa17.8■□□□□ 0.44
GTF2I-218ENST00000620879 CECR2Q9BXF3 1484 aa17.77■□□□□ 0.43
GTF2I-218ENST00000620879 NEFLP07196 543 aa17.67■□□□□ 0.42
GTF2I-218ENST00000620879 ZNF777Q9ULD5 760 aaPredicted RBP17.65■□□□□ 0.42
GTF2I-218ENST00000620879 DIEXFQ68CQ4 756 aaKnown RBP17.64■□□□□ 0.41
GTF2I-218ENST00000620879 ZNF326Q5BKZ1 582 aaKnown RBP17.63■□□□□ 0.41
GTF2I-218ENST00000620879 MYO15BQ96JP2 1530 aa17.61■□□□□ 0.41
GTF2I-218ENST00000620879 DCAF1Q9Y4B6 1507 aa17.61■□□□□ 0.41
GTF2I-218ENST00000620879 BAZ1BQ9UIG0 1483 aaKnown RBP17.59■□□□□ 0.41
GTF2I-218ENST00000620879 SLC4A1APQ9BWU0 796 aaKnown RBP17.56■□□□□ 0.4
GTF2I-218ENST00000620879 WRNQ14191 1432 aaPredicted RBP eCLIP17.51■□□□□ 0.39
GTF2I-218ENST00000620879 CDK11AQ9UQ88 783 aaPredicted RBP17.49■□□□□ 0.39
GTF2I-218ENST00000620879 BAZ1AQ9NRL2 1556 aaPredicted RBP17.49■□□□□ 0.39
GTF2I-218ENST00000620879 CHMP7Q8WUX9 453 aaPredicted RBP17.48■□□□□ 0.39
GTF2I-218ENST00000620879 MROH2BQ7Z745 1585 aa17.46■□□□□ 0.38
GTF2I-218ENST00000620879 CHIC2Q9UKJ5 165 aa17.44■□□□□ 0.38
GTF2I-218ENST00000620879 CLIP1P30622 1438 aa17.43■□□□□ 0.38
GTF2I-218ENST00000620879 ERICH6Q7L0X2 663 aa17.37■□□□□ 0.37
GTF2I-218ENST00000620879 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
GTF2I-218ENST00000620879 CEP162Q5TB80 1403 aa17.33■□□□□ 0.36
GTF2I-218ENST00000620879 MTUS2Q5JR59 1369 aa17.31■□□□□ 0.36
GTF2I-218ENST00000620879 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
GTF2I-218ENST00000620879 SOGA1O94964 1423 aa17.29■□□□□ 0.36
GTF2I-218ENST00000620879 KIF27Q86VH2 1401 aa17.28■□□□□ 0.36
GTF2I-218ENST00000620879 EEA1Q15075 1411 aa17.27■□□□□ 0.36
GTF2I-218ENST00000620879 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
GTF2I-218ENST00000620879 GOLGA3Q08378 1498 aa17.27■□□□□ 0.36
GTF2I-218ENST00000620879 ANP32CO43423 234 aa17.24■□□□□ 0.35
GTF2I-218ENST00000620879 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■■■□□ 15.9
GTF2I-218ENST00000620879 KCNH8Q96L42 1107 aa17.23■□□□□ 0.35
GTF2I-218ENST00000620879 CHGAP10645 457 aaKnown RBP17.2■□□□□ 0.34
GTF2I-218ENST00000620879 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
GTF2I-218ENST00000620879 RRP7BPQ9NSQ0 103 aa17.19■□□□□ 0.34
GTF2I-218ENST00000620879 BCANQ96GW7 911 aa17.19■□□□□ 0.34
GTF2I-218ENST00000620879 ABCC8Q09428 1581 aa17.19■□□□□ 0.34
GTF2I-218ENST00000620879 TNIKQ9UKE5 1360 aa17.18■□□□□ 0.34
GTF2I-218ENST00000620879 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
GTF2I-218ENST00000620879 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
GTF2I-218ENST00000620879 ERCC6Q03468 1493 aa17.18■□□□□ 0.34
GTF2I-218ENST00000620879 TONSLQ96HA7 1378 aa17.18■□□□□ 0.34
GTF2I-218ENST00000620879 WIZO95785 1651 aa17.15■□□□□ 0.34
GTF2I-218ENST00000620879 CEP164Q9UPV0 1460 aa17.15■□□□□ 0.34
GTF2I-218ENST00000620879 CUX2O14529 1486 aa17.14■□□□□ 0.33
GTF2I-218ENST00000620879 HIRIP3Q9BW71 556 aaPredicted RBP17.12■□□□□ 0.33
GTF2I-218ENST00000620879 PLEKHD1A6NEE1 506 aa17.11■□□□□ 0.33
GTF2I-218ENST00000620879 DDX10Q13206 875 aaKnown RBP17.11■□□□□ 0.33
GTF2I-218ENST00000620879 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
GTF2I-218ENST00000620879 ESF1Q9H501 851 aaKnown RBP17.08■□□□□ 0.32
GTF2I-218ENST00000620879 KDM2AQ9Y2K7 1162 aa17.08■□□□□ 0.32
GTF2I-218ENST00000620879 TDRD9Q8NDG6 1382 aaKnown RBP17.08■□□□□ 0.32
GTF2I-218ENST00000620879 GTF3C3Q9Y5Q9 886 aa17.07■□□□□ 0.32
GTF2I-218ENST00000620879 SMARCA2P51531 1590 aa17.05■□□□□ 0.32
GTF2I-218ENST00000620879 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
GTF2I-218ENST00000620879 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
GTF2I-218ENST00000620879 ATAD2BQ9ULI0 1458 aa17.03■□□□□ 0.32
GTF2I-218ENST00000620879 CFDP1Q9UEE9 299 aaPredicted RBP17.02■□□□□ 0.32
GTF2I-218ENST00000620879 MYT1Q01538 1121 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms