RNA–Protein interactions for RNA: ENST00000620859.4

LINC01515-217, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5 BASIC

Gene LINC01515, Length 694 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-217ENST00000620859 AEBP2Q6ZN18 517 aaPredicted RBP25.54■■□□□ 1.68
LINC01515-217ENST00000620859 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
LINC01515-217ENST00000620859 SENP3Q9H4L4 574 aaPredicted RBP21.73■■□□□ 1.07
LINC01515-217ENST00000620859 PHF23Q9BUL5 403 aaPredicted RBP21.48■■□□□ 1.03
LINC01515-217ENST00000620859 FOXD1Q16676 465 aa20.26■□□□□ 0.83
LINC01515-217ENST00000620859 PLPPR3Q6T4P5 718 aa19.53■□□□□ 0.72
LINC01515-217ENST00000620859 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
LINC01515-217ENST00000620859 ADRA2BP18089 450 aa19■□□□□ 0.63
LINC01515-217ENST00000620859 PIAS4Q8N2W9 510 aaPredicted RBP18.93■□□□□ 0.62
LINC01515-217ENST00000620859 MSH5O43196 834 aa18.87■□□□□ 0.61
LINC01515-217ENST00000620859 POTEDQ86YR6 584 aa18.19■□□□□ 0.5
LINC01515-217ENST00000620859 MAPK8IP2Q13387 824 aaPredicted RBP17.41■□□□□ 0.38
LINC01515-217ENST00000620859 SCAF1Q9H7N4 1312 aaKnown RBP17.35■□□□□ 0.37
LINC01515-217ENST00000620859 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
LINC01515-217ENST00000620859 PPP4R3CPQ6ZMV5 832 aa17.15■□□□□ 0.34
LINC01515-217ENST00000620859 CNKSR2Q8WXI2 1034 aa16.79■□□□□ 0.28
LINC01515-217ENST00000620859 HOXD11P31277 338 aaPredicted RBP16.7■□□□□ 0.26
LINC01515-217ENST00000620859 RNF216Q9NWF9 866 aaPredicted RBP16.61■□□□□ 0.25
LINC01515-217ENST00000620859 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
LINC01515-217ENST00000620859 DCAF8L1A6NGE4 600 aa16.49■□□□□ 0.23
LINC01515-217ENST00000620859 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
LINC01515-217ENST00000620859 RNF39Q9H2S5 420 aa16.14■□□□□ 0.17
LINC01515-217ENST00000620859 KCNA4P22459 653 aa16.12■□□□□ 0.17
LINC01515-217ENST00000620859 DNAJC5BQ9UF47 199 aa16.11■□□□□ 0.17
LINC01515-217ENST00000620859 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
LINC01515-217ENST00000620859 C1QBPQ07021 282 aaKnown RBP15.9■□□□□ 0.14
LINC01515-217ENST00000620859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC01515-217ENST00000620859 U3KPZ7 1027 aaPredicted RBP15.59■□□□□ 0.09
LINC01515-217ENST00000620859 SLC4A2P04920 1241 aa15.55■□□□□ 0.08
LINC01515-217ENST00000620859 SPINK5Q9NQ38 1064 aaPredicted RBP15.31■□□□□ 0.04
LINC01515-217ENST00000620859 CAPN15O75808 1086 aa15.24■□□□□ 0.03
LINC01515-217ENST00000620859 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
LINC01515-217ENST00000620859 DSG3P32926 999 aa15.17■□□□□ 0.02
LINC01515-217ENST00000620859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.16■□□□□ 0.02
LINC01515-217ENST00000620859 HNRNPUL2Q1KMD3 747 aaKnown RBP15.16■□□□□ 0.02
LINC01515-217ENST00000620859 APLP2Q06481 763 aa15.12■□□□□ 0.01
LINC01515-217ENST00000620859 SAMD1Q6SPF0 538 aaPredicted RBP15.09■□□□□ 0.01
LINC01515-217ENST00000620859 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
LINC01515-217ENST00000620859 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
LINC01515-217ENST00000620859 ZNF219Q9P2Y4 722 aaPredicted RBP15.02■□□□□ -0
LINC01515-217ENST00000620859 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
LINC01515-217ENST00000620859 ABCB7O75027 752 aa14.91□□□□□ -0.02
LINC01515-217ENST00000620859 ZBTB22O15209 634 aa14.84□□□□□ -0.03
LINC01515-217ENST00000620859 ATF5Q9Y2D1 282 aaPredicted RBP14.72□□□□□ -0.05
LINC01515-217ENST00000620859 POLA2Q14181 598 aa14.69□□□□□ -0.06
LINC01515-217ENST00000620859 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
LINC01515-217ENST00000620859 RBM42Q9BTD8 480 aaKnown RBP14.43□□□□□ -0.1
LINC01515-217ENST00000620859 ZBTB12Q9Y330 459 aaPredicted RBP14.39□□□□□ -0.11
LINC01515-217ENST00000620859 CSRNP3Q8WYN3 585 aa14.28□□□□□ -0.12
LINC01515-217ENST00000620859 POTEHQ6S545 545 aa14.27□□□□□ -0.13
LINC01515-217ENST00000620859 OSCARQ8IYS5 282 aa14.21□□□□□ -0.13
LINC01515-217ENST00000620859 AKT1S1Q96B36 256 aa14.15□□□□□ -0.14
LINC01515-217ENST00000620859 EHMT2Q96KQ7 1210 aa14.12□□□□□ -0.15
LINC01515-217ENST00000620859 FBLN2P98095 1184 aa14.09□□□□□ -0.15
LINC01515-217ENST00000620859 CHRDL2Q6WN34 429 aa14.07□□□□□ -0.16
LINC01515-217ENST00000620859 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
LINC01515-217ENST00000620859 REM2Q8IYK8 340 aaPredicted RBP14.03□□□□□ -0.16
LINC01515-217ENST00000620859 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
LINC01515-217ENST00000620859 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
LINC01515-217ENST00000620859 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
LINC01515-217ENST00000620859 PITPNM1O00562 1244 aa13.87□□□□□ -0.19
LINC01515-217ENST00000620859 SSUH2Q9Y2M2 353 aa13.82□□□□□ -0.2
LINC01515-217ENST00000620859 ZNF692Q9BU19 519 aaPredicted RBP13.81□□□□□ -0.2
LINC01515-217ENST00000620859 PIP4P2Q8N4L2 257 aa13.78□□□□□ -0.2
LINC01515-217ENST00000620859 FXR2P51116 673 aaKnown RBP eCLIP13.73□□□□□ -0.21
LINC01515-217ENST00000620859 SPDYE1Q8NFV5 336 aaPredicted RBP13.68□□□□□ -0.22
LINC01515-217ENST00000620859 PABPN1Q86U42 306 aaKnown RBP eCLIP13.63□□□□□ -0.23
LINC01515-217ENST00000620859 CLEC11AQ9Y240 323 aa13.63□□□□□ -0.23
LINC01515-217ENST00000620859 PRKAR2AP13861 404 aaKnown RBP13.5□□□□□ -0.25
LINC01515-217ENST00000620859 HAX1O00165 279 aa13.46□□□□□ -0.25
LINC01515-217ENST00000620859 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
LINC01515-217ENST00000620859 PRR29P0C7W0 189 aa13.44□□□□□ -0.26
LINC01515-217ENST00000620859 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
LINC01515-217ENST00000620859 CHADLQ6NUI6 762 aa13.37□□□□□ -0.27
LINC01515-217ENST00000620859 EVX2Q03828 476 aa13.36□□□□□ -0.27
LINC01515-217ENST00000620859 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
LINC01515-217ENST00000620859 STAG3Q9UJ98 1225 aa13.27□□□□□ -0.29
LINC01515-217ENST00000620859 FARP1Q9Y4F1 1045 aaPredicted RBP13.21□□□□□ -0.29
LINC01515-217ENST00000620859 PROM2Q8N271 834 aa13.18□□□□□ -0.3
LINC01515-217ENST00000620859 CREBZFQ9NS37 354 aa13.18□□□□□ -0.3
LINC01515-217ENST00000620859 CD44P16070 742 aaKnown RBP13.08□□□□□ -0.32
LINC01515-217ENST00000620859 GABBR2O75899 941 aa13.04□□□□□ -0.32
LINC01515-217ENST00000620859 MNX1P50219 401 aaPredicted RBP12.99□□□□□ -0.33
LINC01515-217ENST00000620859 FKBP8Q14318 412 aa12.91□□□□□ -0.34
LINC01515-217ENST00000620859 ZNF579Q8NAF0 562 aaKnown RBP12.91□□□□□ -0.34
LINC01515-217ENST00000620859 ZRANB1Q9UGI0 708 aa12.91□□□□□ -0.34
LINC01515-217ENST00000620859 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
LINC01515-217ENST00000620859 CLCN6P51797 869 aa12.88□□□□□ -0.35
LINC01515-217ENST00000620859 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
LINC01515-217ENST00000620859 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
LINC01515-217ENST00000620859 MIER1Q8N108 512 aa12.79□□□□□ -0.36
LINC01515-217ENST00000620859 PHF12Q96QT6 1004 aa12.76□□□□□ -0.37
LINC01515-217ENST00000620859 GALR2O43603 387 aaPredicted RBP12.73□□□□□ -0.37
LINC01515-217ENST00000620859 PLEKHG5O94827 1062 aa12.73□□□□□ -0.37
LINC01515-217ENST00000620859 PLCD3Q8N3E9 789 aa12.69□□□□□ -0.38
LINC01515-217ENST00000620859 DCBLD2Q96PD2 775 aa12.69□□□□□ -0.38
LINC01515-217ENST00000620859 TSPYL2Q9H2G4 693 aaPredicted RBP12.68□□□□□ -0.38
LINC01515-217ENST00000620859 CCDC61Q9Y6R9 512 aa12.64□□□□□ -0.39
LINC01515-217ENST00000620859 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
LINC01515-217ENST00000620859 LHX8Q68G74 356 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms