RNA–Protein interactions for RNA: ENST00000619374.4

RIMKLB-213, Transcript of ribosomal modification protein rimK like family member B, humanhuman

TSL 5 BASIC

Gene RIMKLB, Length 1,519 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLB-213ENST00000619374 AEBP2Q6ZN18 517 aaPredicted RBP34.15■■■■□ 3.06
RIMKLB-213ENST00000619374 CHIC1Q5VXU3 224 aa32.27■■■□□ 2.76
RIMKLB-213ENST00000619374 SENP3Q9H4L4 574 aaPredicted RBP29.14■■■□□ 2.25
RIMKLB-213ENST00000619374 PHF23Q9BUL5 403 aaPredicted RBP28.74■■■□□ 2.19
RIMKLB-213ENST00000619374 FOXD1Q16676 465 aa27.19■■□□□ 1.94
RIMKLB-213ENST00000619374 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
RIMKLB-213ENST00000619374 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
RIMKLB-213ENST00000619374 MSH5O43196 834 aa25.48■■□□□ 1.67
RIMKLB-213ENST00000619374 PIAS4Q8N2W9 510 aaPredicted RBP25.33■■□□□ 1.65
RIMKLB-213ENST00000619374 PPP6R1Q9UPN7 881 aa25.31■■□□□ 1.64
RIMKLB-213ENST00000619374 ADRA2BP18089 450 aa25.19■■□□□ 1.62
RIMKLB-213ENST00000619374 POTEDQ86YR6 584 aa25.15■■□□□ 1.62
RIMKLB-213ENST00000619374 MAPK8IP2Q13387 824 aaPredicted RBP23.2■■□□□ 1.3
RIMKLB-213ENST00000619374 DMRT2Q9Y5R5 561 aa23.09■■□□□ 1.29
RIMKLB-213ENST00000619374 SCAF1Q9H7N4 1312 aaKnown RBP23.04■■□□□ 1.28
RIMKLB-213ENST00000619374 PPP4R3CPQ6ZMV5 832 aa22.5■■□□□ 1.19
RIMKLB-213ENST00000619374 CCDC180Q9P1Z9 1646 aa22.47■■□□□ 1.19
RIMKLB-213ENST00000619374 HOXD11P31277 338 aaPredicted RBP22.19■■□□□ 1.14
RIMKLB-213ENST00000619374 CNKSR2Q8WXI2 1034 aa22.11■■□□□ 1.13
RIMKLB-213ENST00000619374 DCAF8L1A6NGE4 600 aa22.08■■□□□ 1.13
RIMKLB-213ENST00000619374 RNF216Q9NWF9 866 aaPredicted RBP21.97■■□□□ 1.11
RIMKLB-213ENST00000619374 CACNB1Q02641 598 aaPredicted RBP21.94■■□□□ 1.1
RIMKLB-213ENST00000619374 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
RIMKLB-213ENST00000619374 RNF39Q9H2S5 420 aa21.75■■□□□ 1.07
RIMKLB-213ENST00000619374 NCBP3Q53F19 620 aaKnown RBP21.57■■□□□ 1.04
RIMKLB-213ENST00000619374 DCAF1Q9Y4B6 1507 aa21.53■■□□□ 1.04
RIMKLB-213ENST00000619374 DNAJC5BQ9UF47 199 aa21.48■■□□□ 1.03
RIMKLB-213ENST00000619374 C1QBPQ07021 282 aaKnown RBP21.42■■□□□ 1.02
RIMKLB-213ENST00000619374 SHROOM4Q9ULL8 1493 aa21.31■■□□□ 1
RIMKLB-213ENST00000619374 NPM3O75607 178 aaKnown RBP21.29■■□□□ 1
RIMKLB-213ENST00000619374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.09■□□□□ 0.976e-6■□□□□ 9.5
RIMKLB-213ENST00000619374 MYO15BQ96JP2 1530 aa21.09■□□□□ 0.97
RIMKLB-213ENST00000619374 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
RIMKLB-213ENST00000619374 SUPT5HO00267 1087 aaKnown RBP20.76■□□□□ 0.91
RIMKLB-213ENST00000619374 KCNA4P22459 653 aa20.73■□□□□ 0.91
RIMKLB-213ENST00000619374 NACADO15069 1562 aa20.73■□□□□ 0.91
RIMKLB-213ENST00000619374 U3KPZ7 1027 aaPredicted RBP20.67■□□□□ 0.9
RIMKLB-213ENST00000619374 ABCC9O60706 1549 aa20.64■□□□□ 0.89
RIMKLB-213ENST00000619374 SCRIBQ14160 1630 aa20.59■□□□□ 0.89
RIMKLB-213ENST00000619374 SPINK5Q9NQ38 1064 aaPredicted RBP20.41■□□□□ 0.86
RIMKLB-213ENST00000619374 RB1CC1Q8TDY2 1594 aa20.41■□□□□ 0.86
RIMKLB-213ENST00000619374 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
RIMKLB-213ENST00000619374 CAPN15O75808 1086 aa20.34■□□□□ 0.85
RIMKLB-213ENST00000619374 DSG3P32926 999 aa20.32■□□□□ 0.84
RIMKLB-213ENST00000619374 RSF1Q96T23 1441 aaPredicted RBP20.27■□□□□ 0.84
RIMKLB-213ENST00000619374 UNC13AQ9UPW8 1703 aa20.09■□□□□ 0.81
RIMKLB-213ENST00000619374 APLP2Q06481 763 aa20.03■□□□□ 0.8
RIMKLB-213ENST00000619374 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
RIMKLB-213ENST00000619374 MROH2BQ7Z745 1585 aa20.01■□□□□ 0.79
RIMKLB-213ENST00000619374 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20■□□□□ 0.79
RIMKLB-213ENST00000619374 HNRNPUL2Q1KMD3 747 aaKnown RBP20■□□□□ 0.79
RIMKLB-213ENST00000619374 BAZ1AQ9NRL2 1556 aaPredicted RBP19.99■□□□□ 0.79
RIMKLB-213ENST00000619374 TRHP20396 242 aaPredicted RBP19.97■□□□□ 0.79
RIMKLB-213ENST00000619374 ZNF219Q9P2Y4 722 aaPredicted RBP19.96■□□□□ 0.79
RIMKLB-213ENST00000619374 WIZO95785 1651 aa19.89■□□□□ 0.78
RIMKLB-213ENST00000619374 SAMD1Q6SPF0 538 aaPredicted RBP19.89■□□□□ 0.77
RIMKLB-213ENST00000619374 ABCB7O75027 752 aa19.86■□□□□ 0.77
RIMKLB-213ENST00000619374 SMARCA4P51532 1647 aa19.84■□□□□ 0.77
RIMKLB-213ENST00000619374 BICRAQ9NZM4 1560 aa19.79■□□□□ 0.76
RIMKLB-213ENST00000619374 TOP2AP11388 1531 aaKnown RBP19.75■□□□□ 0.75
RIMKLB-213ENST00000619374 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
RIMKLB-213ENST00000619374 MYCNP04198 464 aaPredicted RBP19.67■□□□□ 0.74
RIMKLB-213ENST00000619374 POTEHQ6S545 545 aa19.67■□□□□ 0.74
RIMKLB-213ENST00000619374 PEG3Q9GZU2 1588 aa19.63■□□□□ 0.73
RIMKLB-213ENST00000619374 SMARCA2P51531 1590 aa19.57■□□□□ 0.72
RIMKLB-213ENST00000619374 TRIM41Q8WV44 630 aa19.53■□□□□ 0.72
RIMKLB-213ENST00000619374 SLC4A1APQ9BWU0 796 aaKnown RBP19.52■□□□□ 0.72
RIMKLB-213ENST00000619374 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
RIMKLB-213ENST00000619374 POLA2Q14181 598 aa19.44■□□□□ 0.7
RIMKLB-213ENST00000619374 LOC105371045A0A1W2PR82 267 aa19.4■□□□□ 0.7
RIMKLB-213ENST00000619374 PABPN1Q86U42 306 aaKnown RBP eCLIP19.4■□□□□ 0.7
RIMKLB-213ENST00000619374 FOXD4L1Q9NU39 408 aa19.39■□□□□ 0.69
RIMKLB-213ENST00000619374 RBM42Q9BTD8 480 aaKnown RBP19.35■□□□□ 0.69
RIMKLB-213ENST00000619374 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.69
RIMKLB-213ENST00000619374 ATF5Q9Y2D1 282 aaPredicted RBP19.25■□□□□ 0.67
RIMKLB-213ENST00000619374 BAZ1BQ9UIG0 1483 aaKnown RBP19.24■□□□□ 0.67
RIMKLB-213ENST00000619374 ABCC8Q09428 1581 aa19.23■□□□□ 0.67
RIMKLB-213ENST00000619374 HMGXB3Q12766 1538 aa19.17■□□□□ 0.66
RIMKLB-213ENST00000619374 EEA1Q15075 1411 aa19.14■□□□□ 0.66
RIMKLB-213ENST00000619374 FAM9AQ8IZU1 332 aaPredicted RBP19.1■□□□□ 0.65
RIMKLB-213ENST00000619374 NCAPD3P42695 1498 aa19.1■□□□□ 0.65
RIMKLB-213ENST00000619374 ZBTB22O15209 634 aa19.08■□□□□ 0.64
RIMKLB-213ENST00000619374 PCGF6Q9BYE7 350 aa19.08■□□□□ 0.64
RIMKLB-213ENST00000619374 HRCP23327 699 aa19.06■□□□□ 0.64
RIMKLB-213ENST00000619374 WRNQ14191 1432 aaPredicted RBP eCLIP19.06■□□□□ 0.64
RIMKLB-213ENST00000619374 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
RIMKLB-213ENST00000619374 ZBTB12Q9Y330 459 aaPredicted RBP19.02■□□□□ 0.64
RIMKLB-213ENST00000619374 CHRDL2Q6WN34 429 aa19.01■□□□□ 0.63
RIMKLB-213ENST00000619374 SYNJ1O43426 1573 aa19■□□□□ 0.63
RIMKLB-213ENST00000619374 SOGA1O94964 1423 aa18.94■□□□□ 0.62
RIMKLB-213ENST00000619374 BIVM-ERCC5R4GMW8 1640 aa18.93■□□□□ 0.62
RIMKLB-213ENST00000619374 TOP2BQ02880 1626 aa18.92■□□□□ 0.62
RIMKLB-213ENST00000619374 PRDM2Q13029 1718 aa18.9■□□□□ 0.62
RIMKLB-213ENST00000619374 AKT1S1Q96B36 256 aa18.9■□□□□ 0.62
RIMKLB-213ENST00000619374 TNIKQ9UKE5 1360 aa18.89■□□□□ 0.62
RIMKLB-213ENST00000619374 KIF21BO75037 1637 aa18.89■□□□□ 0.61
RIMKLB-213ENST00000619374 GOLGA3Q08378 1498 aa18.86■□□□□ 0.61
RIMKLB-213ENST00000619374 CSRNP3Q8WYN3 585 aa18.85■□□□□ 0.61
RIMKLB-213ENST00000619374 RUSC2Q8N2Y8 1516 aa18.85■□□□□ 0.61
RIMKLB-213ENST00000619374 ATXN8OSP0DMR3 200 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms