RNA–Protein interactions for RNA: ENST00000618570.1

UBE2NL-201, Transcript of ubiquitin conjugating enzyme E2 N like (gene/pseudogene), humanhuman

APPRIS P1 BASIC

Gene UBE2NL, Length 1,185 nt, Biotype polymorphic pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NL-201ENST00000618570 AEBP2Q6ZN18 517 aaPredicted RBP34.55■■■■□ 3.12
UBE2NL-201ENST00000618570 CHIC1Q5VXU3 224 aa33.37■■■□□ 2.93
UBE2NL-201ENST00000618570 SENP3Q9H4L4 574 aaPredicted RBP29.36■■■□□ 2.29
UBE2NL-201ENST00000618570 PHF23Q9BUL5 403 aaPredicted RBP29.34■■■□□ 2.29
UBE2NL-201ENST00000618570 FOXD1Q16676 465 aa27.3■■□□□ 1.96
UBE2NL-201ENST00000618570 PLPPR3Q6T4P5 718 aa26.92■■□□□ 1.9
UBE2NL-201ENST00000618570 PPP6R1Q9UPN7 881 aa25.99■■□□□ 1.75
UBE2NL-201ENST00000618570 ADRA2BP18089 450 aa25.93■■□□□ 1.74
UBE2NL-201ENST00000618570 PIAS4Q8N2W9 510 aaPredicted RBP25.63■■□□□ 1.69
UBE2NL-201ENST00000618570 MSH5O43196 834 aa25.3■■□□□ 1.64
UBE2NL-201ENST00000618570 SCAF1Q9H7N4 1312 aaKnown RBP23.71■■□□□ 1.39
UBE2NL-201ENST00000618570 POTEDQ86YR6 584 aa23.69■■□□□ 1.38
UBE2NL-201ENST00000618570 PPP4R3CPQ6ZMV5 832 aa23.68■■□□□ 1.38
UBE2NL-201ENST00000618570 MAPK8IP2Q13387 824 aaPredicted RBP23.64■■□□□ 1.37
UBE2NL-201ENST00000618570 DMRT2Q9Y5R5 561 aa23.39■■□□□ 1.33
UBE2NL-201ENST00000618570 CNKSR2Q8WXI2 1034 aa23.1■■□□□ 1.29
UBE2NL-201ENST00000618570 NCBP3Q53F19 620 aaKnown RBP22.94■■□□□ 1.26
UBE2NL-201ENST00000618570 HOXD11P31277 338 aaPredicted RBP22.77■■□□□ 1.24
UBE2NL-201ENST00000618570 RNF216Q9NWF9 866 aaPredicted RBP22.75■■□□□ 1.23
UBE2NL-201ENST00000618570 KCNA4P22459 653 aa22.72■■□□□ 1.23
UBE2NL-201ENST00000618570 NPM3O75607 178 aaKnown RBP22.62■■□□□ 1.21
UBE2NL-201ENST00000618570 DCAF8L1A6NGE4 600 aa22.32■■□□□ 1.16
UBE2NL-201ENST00000618570 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
UBE2NL-201ENST00000618570 RNF39Q9H2S5 420 aa21.67■■□□□ 1.06
UBE2NL-201ENST00000618570 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.65■■□□□ 1.06
UBE2NL-201ENST00000618570 SLC4A1APQ9BWU0 796 aaKnown RBP21.55■■□□□ 1.04
UBE2NL-201ENST00000618570 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
UBE2NL-201ENST00000618570 C1QBPQ07021 282 aaKnown RBP21.38■■□□□ 1.01
UBE2NL-201ENST00000618570 CACNB1Q02641 598 aaPredicted RBP21.32■■□□□ 1
UBE2NL-201ENST00000618570 U3KPZ7 1027 aaPredicted RBP21.3■■□□□ 1
UBE2NL-201ENST00000618570 FOXD4L1Q9NU39 408 aa21.01■□□□□ 0.95
UBE2NL-201ENST00000618570 ZBTB22O15209 634 aa20.91■□□□□ 0.94
UBE2NL-201ENST00000618570 MYCNP04198 464 aaPredicted RBP20.9■□□□□ 0.94
UBE2NL-201ENST00000618570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
UBE2NL-201ENST00000618570 HNRNPUL2Q1KMD3 747 aaKnown RBP20.88■□□□□ 0.93
UBE2NL-201ENST00000618570 SPINK5Q9NQ38 1064 aaPredicted RBP20.8■□□□□ 0.92
UBE2NL-201ENST00000618570 SAMD1Q6SPF0 538 aaPredicted RBP20.79■□□□□ 0.92
UBE2NL-201ENST00000618570 APLP2Q06481 763 aa20.73■□□□□ 0.91
UBE2NL-201ENST00000618570 CAPN15O75808 1086 aa20.7■□□□□ 0.9
UBE2NL-201ENST00000618570 TRHP20396 242 aaPredicted RBP20.52■□□□□ 0.88
UBE2NL-201ENST00000618570 ZNF219Q9P2Y4 722 aaPredicted RBP20.51■□□□□ 0.87
UBE2NL-201ENST00000618570 DSG3P32926 999 aa20.49■□□□□ 0.87
UBE2NL-201ENST00000618570 CSRNP3Q8WYN3 585 aa20.49■□□□□ 0.87
UBE2NL-201ENST00000618570 EHMT2Q96KQ7 1210 aa20.49■□□□□ 0.87
UBE2NL-201ENST00000618570 ATF5Q9Y2D1 282 aaPredicted RBP20.38■□□□□ 0.85
UBE2NL-201ENST00000618570 ATXN8OSP0DMR3 200 aa20.32■□□□□ 0.84
UBE2NL-201ENST00000618570 ABCB7O75027 752 aa20.27■□□□□ 0.84
UBE2NL-201ENST00000618570 POLA2Q14181 598 aa20.13■□□□□ 0.81
UBE2NL-201ENST00000618570 ZBTB12Q9Y330 459 aaPredicted RBP19.76■□□□□ 0.75
UBE2NL-201ENST00000618570 FBLN2P98095 1184 aa19.52■□□□□ 0.72
UBE2NL-201ENST00000618570 RBM42Q9BTD8 480 aaKnown RBP19.51■□□□□ 0.71
UBE2NL-201ENST00000618570 MKRN4PQ13434 485 aaPredicted RBP19.49■□□□□ 0.71
UBE2NL-201ENST00000618570 OSCARQ8IYS5 282 aa19.45■□□□□ 0.7
UBE2NL-201ENST00000618570 SPDYE2BA6NHP3 402 aa19.21■□□□□ 0.67
UBE2NL-201ENST00000618570 SPDYE6P0CI01 402 aa19.21■□□□□ 0.67
UBE2NL-201ENST00000618570 SPDYE2Q495Y8 402 aa19.21■□□□□ 0.67
UBE2NL-201ENST00000618570 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
UBE2NL-201ENST00000618570 ZNF692Q9BU19 519 aaPredicted RBP19.06■□□□□ 0.64
UBE2NL-201ENST00000618570 SSUH2Q9Y2M2 353 aa19.04■□□□□ 0.64
UBE2NL-201ENST00000618570 REM2Q8IYK8 340 aaPredicted RBP19.02■□□□□ 0.64
UBE2NL-201ENST00000618570 SPDYE4A6NLX3 237 aa18.85■□□□□ 0.61
UBE2NL-201ENST00000618570 CHRDL2Q6WN34 429 aa18.85■□□□□ 0.61
UBE2NL-201ENST00000618570 PITPNM1O00562 1244 aa18.8■□□□□ 0.6
UBE2NL-201ENST00000618570 PABPN1Q86U42 306 aaKnown RBP eCLIP18.8■□□□□ 0.6
UBE2NL-201ENST00000618570 SPDYE1Q8NFV5 336 aaPredicted RBP18.72■□□□□ 0.59
UBE2NL-201ENST00000618570 POTEHQ6S545 545 aa18.67■□□□□ 0.58
UBE2NL-201ENST00000618570 CLEC11AQ9Y240 323 aa18.63■□□□□ 0.57
UBE2NL-201ENST00000618570 FXR2P51116 673 aaKnown RBP eCLIP18.54■□□□□ 0.56
UBE2NL-201ENST00000618570 PIP4P2Q8N4L2 257 aa18.54■□□□□ 0.56
UBE2NL-201ENST00000618570 PROM2Q8N271 834 aa18.53■□□□□ 0.56
UBE2NL-201ENST00000618570 FKBP8Q14318 412 aa18.5■□□□□ 0.55
UBE2NL-201ENST00000618570 PRR29P0C7W0 189 aa18.43■□□□□ 0.54
UBE2NL-201ENST00000618570 STAG3Q9UJ98 1225 aa18.42■□□□□ 0.54
UBE2NL-201ENST00000618570 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
UBE2NL-201ENST00000618570 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
UBE2NL-201ENST00000618570 CREBZFQ9NS37 354 aa18.14■□□□□ 0.49
UBE2NL-201ENST00000618570 FARP1Q9Y4F1 1045 aaPredicted RBP18.05■□□□□ 0.48
UBE2NL-201ENST00000618570 HAX1O00165 279 aa18.01■□□□□ 0.47
UBE2NL-201ENST00000618570 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
UBE2NL-201ENST00000618570 C19orf67A6NJJ6 358 aa17.93■□□□□ 0.46
UBE2NL-201ENST00000618570 MNX1P50219 401 aaPredicted RBP17.92■□□□□ 0.46
UBE2NL-201ENST00000618570 MIER1Q8N108 512 aa17.9■□□□□ 0.46
UBE2NL-201ENST00000618570 EVX2Q03828 476 aa17.88■□□□□ 0.45
UBE2NL-201ENST00000618570 PLCD3Q8N3E9 789 aa17.82■□□□□ 0.44
UBE2NL-201ENST00000618570 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
UBE2NL-201ENST00000618570 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
UBE2NL-201ENST00000618570 SP7Q8TDD2 431 aaPredicted RBP17.79■□□□□ 0.44
UBE2NL-201ENST00000618570 CD44P16070 742 aaKnown RBP17.76■□□□□ 0.43
UBE2NL-201ENST00000618570 VASPP50552 380 aaPredicted RBP17.73■□□□□ 0.43
UBE2NL-201ENST00000618570 ZBTB47Q9UFB7 747 aaPredicted RBP17.66■□□□□ 0.42
UBE2NL-201ENST00000618570 ZRANB1Q9UGI0 708 aa17.6■□□□□ 0.41
UBE2NL-201ENST00000618570 PAK3O75914 559 aaPredicted RBP17.57■□□□□ 0.4
UBE2NL-201ENST00000618570 ZNF579Q8NAF0 562 aaKnown RBP17.54■□□□□ 0.4
UBE2NL-201ENST00000618570 NUBP1P53384 320 aa17.52■□□□□ 0.4
UBE2NL-201ENST00000618570 RASEFQ8IZ41 740 aa17.52■□□□□ 0.4
UBE2NL-201ENST00000618570 GABBR2O75899 941 aa17.5■□□□□ 0.39
UBE2NL-201ENST00000618570 IFNLR1Q8IU57 520 aaPredicted RBP17.48■□□□□ 0.39
UBE2NL-201ENST00000618570 KLHL34Q8N239 644 aa17.48■□□□□ 0.39
UBE2NL-201ENST00000618570 TSPYL2Q9H2G4 693 aaPredicted RBP17.48■□□□□ 0.39
UBE2NL-201ENST00000618570 CLCN6P51797 869 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms