RNA–Protein interactions for RNA: ENST00000617590.1

STK3-218, Transcript of serine/threonine kinase 3, humanhuman

TSL 5 BASIC

Gene STK3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK3-218ENST00000617590 NISCHQ9Y2I1 1504 aa30.46■■■□□ 2.47
STK3-218ENST00000617590 CCDC180Q9P1Z9 1646 aa26.03■■□□□ 1.76
STK3-218ENST00000617590 SHROOM4Q9ULL8 1493 aa25.84■■□□□ 1.73
STK3-218ENST00000617590 ZCCHC6Q5VYS8 1495 aaKnown RBP25.67■■□□□ 1.7
STK3-218ENST00000617590 DCAF8L2P0C7V8 631 aa25.55■■□□□ 1.68
STK3-218ENST00000617590 SUPT5HO00267 1087 aaKnown RBP25.1■■□□□ 1.61
STK3-218ENST00000617590 DCAF1Q9Y4B6 1507 aa24.9■■□□□ 1.58
STK3-218ENST00000617590 ABCC9O60706 1549 aa24.64■■□□□ 1.54
STK3-218ENST00000617590 SCRIBQ14160 1630 aa24.47■■□□□ 1.51
STK3-218ENST00000617590 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
STK3-218ENST00000617590 NACADO15069 1562 aa24.18■■□□□ 1.46
STK3-218ENST00000617590 CHIC1Q5VXU3 224 aa24.12■■□□□ 1.45
STK3-218ENST00000617590 RSF1Q96T23 1441 aaPredicted RBP23.97■■□□□ 1.43
STK3-218ENST00000617590 RB1CC1Q8TDY2 1594 aa23.9■■□□□ 1.42
STK3-218ENST00000617590 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
STK3-218ENST00000617590 MROH2BQ7Z745 1585 aa23.72■■□□□ 1.39
STK3-218ENST00000617590 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
STK3-218ENST00000617590 WIZO95785 1651 aa23.58■■□□□ 1.37
STK3-218ENST00000617590 PABPN1Q86U42 306 aaKnown RBP eCLIP23.53■■□□□ 1.36
STK3-218ENST00000617590 LOC105371045A0A1W2PR82 267 aa23.48■■□□□ 1.35
STK3-218ENST00000617590 BAZ1AQ9NRL2 1556 aaPredicted RBP23.4■■□□□ 1.34
STK3-218ENST00000617590 TRIM41Q8WV44 630 aa23.35■■□□□ 1.33
STK3-218ENST00000617590 BICRAQ9NZM4 1560 aa23.32■■□□□ 1.32
STK3-218ENST00000617590 SMARCA4P51532 1647 aa23.3■■□□□ 1.32
STK3-218ENST00000617590 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
STK3-218ENST00000617590 EHMT2Q96KQ7 1210 aa23.15■■□□□ 1.3
STK3-218ENST00000617590 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
STK3-218ENST00000617590 CCDC88BA6NC98 1476 aa23.07■■□□□ 1.28
STK3-218ENST00000617590 SMARCA2P51531 1590 aa23.02■■□□□ 1.28
STK3-218ENST00000617590 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
STK3-218ENST00000617590 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
STK3-218ENST00000617590 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
STK3-218ENST00000617590 ATAD2BQ9ULI0 1458 aa22.81■■□□□ 1.24
STK3-218ENST00000617590 PEG3Q9GZU2 1588 aa22.8■■□□□ 1.24
STK3-218ENST00000617590 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
STK3-218ENST00000617590 SOGA1O94964 1423 aa22.62■■□□□ 1.21
STK3-218ENST00000617590 HRCP23327 699 aa22.6■■□□□ 1.21
STK3-218ENST00000617590 RUSC2Q8N2Y8 1516 aa22.56■■□□□ 1.2
STK3-218ENST00000617590 TRIM26Q12899 539 aaPredicted RBP22.55■■□□□ 1.2
STK3-218ENST00000617590 PPARGC1BQ86YN6 1023 aaKnown RBP22.52■■□□□ 1.2
STK3-218ENST00000617590 WRNQ14191 1432 aaPredicted RBP eCLIP22.52■■□□□ 1.2
STK3-218ENST00000617590 SYNJ1O43426 1573 aa22.46■■□□□ 1.19
STK3-218ENST00000617590 NCAPD3P42695 1498 aa22.39■■□□□ 1.18
STK3-218ENST00000617590 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.18
STK3-218ENST00000617590 HMGXB3Q12766 1538 aa22.34■■□□□ 1.17
STK3-218ENST00000617590 UBTFP17480 764 aaKnown RBP22.33■■□□□ 1.16
STK3-218ENST00000617590 TTBK1Q5TCY1 1321 aaPredicted RBP22.27■■□□□ 1.16
STK3-218ENST00000617590 EEA1Q15075 1411 aa22.27■■□□□ 1.16
STK3-218ENST00000617590 CEP162Q5TB80 1403 aa22.27■■□□□ 1.16
STK3-218ENST00000617590 TNIKQ9UKE5 1360 aa22.21■■□□□ 1.15
STK3-218ENST00000617590 GOLGA3Q08378 1498 aa22.18■■□□□ 1.14
STK3-218ENST00000617590 TOP2BQ02880 1626 aa22.16■■□□□ 1.14
STK3-218ENST00000617590 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
STK3-218ENST00000617590 RANGAP1P46060 587 aaPredicted RBP22.13■■□□□ 1.13
STK3-218ENST00000617590 CFTRP13569 1480 aa22.12■■□□□ 1.13
STK3-218ENST00000617590 CUX1P39880 1505 aa22.1■■□□□ 1.13
STK3-218ENST00000617590 CEP164Q9UPV0 1460 aa22.08■■□□□ 1.13
STK3-218ENST00000617590 BIVM-ERCC5R4GMW8 1640 aa22.08■■□□□ 1.13
STK3-218ENST00000617590 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
STK3-218ENST00000617590 KIF21BO75037 1637 aa22.04■■□□□ 1.12
STK3-218ENST00000617590 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
STK3-218ENST00000617590 CLIP1P30622 1438 aa21.94■■□□□ 1.1
STK3-218ENST00000617590 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
STK3-218ENST00000617590 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.87■■□□□ 1.09
STK3-218ENST00000617590 DNAJC5BQ9UF47 199 aa21.85■■□□□ 1.09
STK3-218ENST00000617590 KIF27Q86VH2 1401 aa21.84■■□□□ 1.09
STK3-218ENST00000617590 NESP48681 1621 aa21.84■■□□□ 1.09
STK3-218ENST00000617590 PRXQ9BXM0 1461 aa21.83■■□□□ 1.09
STK3-218ENST00000617590 FANCD2Q9BXW9 1451 aa21.78■■□□□ 1.08
STK3-218ENST00000617590 CUX2O14529 1486 aa21.78■■□□□ 1.08
STK3-218ENST00000617590 FGD5Q6ZNL6 1462 aa21.77■■□□□ 1.08
STK3-218ENST00000617590 ZEB1P37275 1124 aaPredicted RBP21.77■■□□□ 1.08
STK3-218ENST00000617590 VPS8Q8N3P4 1428 aa21.76■■□□□ 1.07
STK3-218ENST00000617590 ERICH3Q5RHP9 1530 aa21.74■■□□□ 1.07
STK3-218ENST00000617590 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
STK3-218ENST00000617590 IGF1RP08069 1367 aa21.68■■□□□ 1.06
STK3-218ENST00000617590 APLP2Q06481 763 aa21.66■■□□□ 1.06
STK3-218ENST00000617590 RAD54L2Q9Y4B4 1467 aa21.66■■□□□ 1.06
STK3-218ENST00000617590 ARAP1Q96P48 1450 aa21.65■■□□□ 1.06
STK3-218ENST00000617590 HNRNPUL2Q1KMD3 747 aaKnown RBP21.62■■□□□ 1.05
STK3-218ENST00000617590 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
STK3-218ENST00000617590 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.05
STK3-218ENST00000617590 DNMBPQ6XZF7 1577 aa21.57■■□□□ 1.04
STK3-218ENST00000617590 POLA1P09884 1462 aaPredicted RBP21.56■■□□□ 1.04
STK3-218ENST00000617590 KANK4Q5T7N3 995 aaPredicted RBP21.53■■□□□ 1.04
STK3-218ENST00000617590 ARHGAP35Q9NRY4 1499 aa21.53■■□□□ 1.04
STK3-218ENST00000617590 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
STK3-218ENST00000617590 LAMC3Q9Y6N6 1575 aa21.5■■□□□ 1.03
STK3-218ENST00000617590 P3H3Q8IVL6 736 aa21.46■■□□□ 1.03
STK3-218ENST00000617590 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
STK3-218ENST00000617590 TDRD9Q8NDG6 1382 aaKnown RBP21.42■■□□□ 1.02
STK3-218ENST00000617590 KIF21AQ7Z4S6 1674 aa21.41■■□□□ 1.02
STK3-218ENST00000617590 PDS5BQ9NTI5 1447 aa21.4■■□□□ 1.02
STK3-218ENST00000617590 ATP1B4Q9UN42 357 aaPredicted RBP21.32■■□□□ 1
STK3-218ENST00000617590 WDR97A6NE52 1622 aa21.3■■□□□ 1
STK3-218ENST00000617590 FHOD3Q2V2M9 1422 aa21.28■■□□□ 1
STK3-218ENST00000617590 GAPVD1Q14C86 1478 aa21.25■□□□□ 0.99
STK3-218ENST00000617590 ITGAEP38570 1179 aa21.25■□□□□ 0.99
STK3-218ENST00000617590 CUL7Q14999 1698 aa21.24■□□□□ 0.99
STK3-218ENST00000617590 ABCA5Q8WWZ7 1642 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms