RNA–Protein interactions for RNA: ENST00000617418.4

ZMYND8-220, Transcript of zinc finger MYND-type containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZMYND8, Length 3,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZMYND8-220ENST00000617418 NISCHQ9Y2I1 1504 aa19.68■□□□□ 0.74
ZMYND8-220ENST00000617418 SHROOM4Q9ULL8 1493 aa17.54■□□□□ 0.4
ZMYND8-220ENST00000617418 SUPT5HO00267 1087 aaKnown RBP17.33■□□□□ 0.36
ZMYND8-220ENST00000617418 DCAF8L2P0C7V8 631 aa17.18■□□□□ 0.34
ZMYND8-220ENST00000617418 ZCCHC6Q5VYS8 1495 aaKnown RBP16.6■□□□□ 0.25
ZMYND8-220ENST00000617418 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
ZMYND8-220ENST00000617418 PCGF6Q9BYE7 350 aa16.48■□□□□ 0.23
ZMYND8-220ENST00000617418 MYO15BQ96JP2 1530 aa16.41■□□□□ 0.22
ZMYND8-220ENST00000617418 CCDC180Q9P1Z9 1646 aa16.38■□□□□ 0.21
ZMYND8-220ENST00000617418 LOC105371045A0A1W2PR82 267 aa16.31■□□□□ 0.2
ZMYND8-220ENST00000617418 HRCP23327 699 aa16.29■□□□□ 0.2
ZMYND8-220ENST00000617418 EHMT2Q96KQ7 1210 aa16.19■□□□□ 0.18
ZMYND8-220ENST00000617418 PPARGC1BQ86YN6 1023 aaKnown RBP16.19■□□□□ 0.18
ZMYND8-220ENST00000617418 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
ZMYND8-220ENST00000617418 TRIM41Q8WV44 630 aa15.98■□□□□ 0.15
ZMYND8-220ENST00000617418 TRIM26Q12899 539 aaPredicted RBP15.89■□□□□ 0.13
ZMYND8-220ENST00000617418 DCAF1Q9Y4B6 1507 aa15.87■□□□□ 0.13
ZMYND8-220ENST00000617418 ABCC9O60706 1549 aa15.86■□□□□ 0.13
ZMYND8-220ENST00000617418 SCRIBQ14160 1630 aa15.84■□□□□ 0.13
ZMYND8-220ENST00000617418 RSF1Q96T23 1441 aaPredicted RBP15.74■□□□□ 0.11
ZMYND8-220ENST00000617418 TTBK1Q5TCY1 1321 aaPredicted RBP15.66■□□□□ 0.1
ZMYND8-220ENST00000617418 RB1CC1Q8TDY2 1594 aa15.59■□□□□ 0.09
ZMYND8-220ENST00000617418 ZEB1P37275 1124 aaPredicted RBP15.55■□□□□ 0.08
ZMYND8-220ENST00000617418 CECR2Q9BXF3 1484 aa15.53■□□□□ 0.08
ZMYND8-220ENST00000617418 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.46■□□□□ 0.06
ZMYND8-220ENST00000617418 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
ZMYND8-220ENST00000617418 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
ZMYND8-220ENST00000617418 UBTFP17480 764 aaKnown RBP15.31■□□□□ 0.04
ZMYND8-220ENST00000617418 WIZO95785 1651 aa15.31■□□□□ 0.04
ZMYND8-220ENST00000617418 NACADO15069 1562 aa15.28■□□□□ 0.04
ZMYND8-220ENST00000617418 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
ZMYND8-220ENST00000617418 RANGAP1P46060 587 aaPredicted RBP15.26■□□□□ 0.03
ZMYND8-220ENST00000617418 SCAF1Q9H7N4 1312 aaKnown RBP15.17■□□□□ 0.02
ZMYND8-220ENST00000617418 ABCC8Q09428 1581 aa15.16■□□□□ 0.02
ZMYND8-220ENST00000617418 CCDC88BA6NC98 1476 aa15.12■□□□□ 0.01
ZMYND8-220ENST00000617418 BAZ1AQ9NRL2 1556 aaPredicted RBP15.1■□□□□ 0.01
ZMYND8-220ENST00000617418 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
ZMYND8-220ENST00000617418 CSRNP3Q8WYN3 585 aa15.1■□□□□ 0.01
ZMYND8-220ENST00000617418 SOGA1O94964 1423 aa15.1■□□□□ 0.01
ZMYND8-220ENST00000617418 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
ZMYND8-220ENST00000617418 CEP162Q5TB80 1403 aa15.06■□□□□ 0
ZMYND8-220ENST00000617418 YTHDC1Q96MU7 727 aaKnown RBP15.04■□□□□ -0
ZMYND8-220ENST00000617418 APLP2Q06481 763 aa15.02■□□□□ -0
ZMYND8-220ENST00000617418 NEUROD1Q13562 356 aa15□□□□□ -0.01
ZMYND8-220ENST00000617418 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
ZMYND8-220ENST00000617418 CENPBP07199 599 aaPredicted RBP14.98□□□□□ -0.01
ZMYND8-220ENST00000617418 ACIN1Q9UKV3 1341 aaKnown RBP14.96□□□□□ -0.01
ZMYND8-220ENST00000617418 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
ZMYND8-220ENST00000617418 GTF3C3Q9Y5Q9 886 aa14.94□□□□□ -0.02
ZMYND8-220ENST00000617418 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
ZMYND8-220ENST00000617418 SMARCA4P51532 1647 aa14.92□□□□□ -0.02
ZMYND8-220ENST00000617418 TNIKQ9UKE5 1360 aa14.92□□□□□ -0.02
ZMYND8-220ENST00000617418 SMARCA2P51531 1590 aa14.9□□□□□ -0.02
ZMYND8-220ENST00000617418 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
ZMYND8-220ENST00000617418 WRNQ14191 1432 aaPredicted RBP eCLIP14.87□□□□□ -0.036e-7■□□□□ 11.3
ZMYND8-220ENST00000617418 ZNF316A6NFI3 1004 aaPredicted RBP14.86□□□□□ -0.03
ZMYND8-220ENST00000617418 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
ZMYND8-220ENST00000617418 GOLGA3Q08378 1498 aa14.83□□□□□ -0.03
ZMYND8-220ENST00000617418 EEA1Q15075 1411 aa14.8□□□□□ -0.04
ZMYND8-220ENST00000617418 CLIP1P30622 1438 aa14.79□□□□□ -0.04
ZMYND8-220ENST00000617418 BICRAQ9NZM4 1560 aa14.77□□□□□ -0.05
ZMYND8-220ENST00000617418 ITGAEP38570 1179 aa14.76□□□□□ -0.05
ZMYND8-220ENST00000617418 MIER1Q8N108 512 aa14.74□□□□□ -0.05
ZMYND8-220ENST00000617418 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.05
ZMYND8-220ENST00000617418 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
ZMYND8-220ENST00000617418 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
ZMYND8-220ENST00000617418 SYNJ1O43426 1573 aa14.65□□□□□ -0.06
ZMYND8-220ENST00000617418 ATP1B4Q9UN42 357 aaPredicted RBP14.63□□□□□ -0.07
ZMYND8-220ENST00000617418 VPS8Q8N3P4 1428 aa14.63□□□□□ -0.07
ZMYND8-220ENST00000617418 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
ZMYND8-220ENST00000617418 KANK4Q5T7N3 995 aaPredicted RBP14.59□□□□□ -0.07
ZMYND8-220ENST00000617418 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
ZMYND8-220ENST00000617418 KIF21BO75037 1637 aa14.48□□□□□ -0.09
ZMYND8-220ENST00000617418 FAM50AQ14320 339 aaKnown RBP14.46□□□□□ -0.09
ZMYND8-220ENST00000617418 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
ZMYND8-220ENST00000617418 KIF27Q86VH2 1401 aa14.41□□□□□ -0.1
ZMYND8-220ENST00000617418 DHX57Q6P158 1386 aaKnown RBP14.41□□□□□ -0.1
ZMYND8-220ENST00000617418 ARAP1Q96P48 1450 aa14.37□□□□□ -0.11
ZMYND8-220ENST00000617418 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
ZMYND8-220ENST00000617418 HIRIP3Q9BW71 556 aaPredicted RBP14.35□□□□□ -0.11
ZMYND8-220ENST00000617418 CCNB3Q8WWL7 1395 aa14.35□□□□□ -0.11
ZMYND8-220ENST00000617418 PRXQ9BXM0 1461 aa14.33□□□□□ -0.12
ZMYND8-220ENST00000617418 BCANQ96GW7 911 aa14.31□□□□□ -0.12
ZMYND8-220ENST00000617418 SIN3AQ96ST3 1273 aa14.31□□□□□ -0.12
ZMYND8-220ENST00000617418 CUX2O14529 1486 aa14.31□□□□□ -0.12
ZMYND8-220ENST00000617418 CLSPNQ9HAW4 1339 aa14.3□□□□□ -0.12
ZMYND8-220ENST00000617418 DDX10Q13206 875 aaKnown RBP14.3□□□□□ -0.12
ZMYND8-220ENST00000617418 KCNH8Q96L42 1107 aa14.3□□□□□ -0.12
ZMYND8-220ENST00000617418 CUX1P39880 1505 aa14.3□□□□□ -0.12
ZMYND8-220ENST00000617418 RAB3GAP2Q9H2M9 1393 aa14.27□□□□□ -0.13
ZMYND8-220ENST00000617418 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
ZMYND8-220ENST00000617418 ERICH3Q5RHP9 1530 aa14.25□□□□□ -0.13
ZMYND8-220ENST00000617418 CARMIL1Q5VZK9 1371 aa14.24□□□□□ -0.13
ZMYND8-220ENST00000617418 SUPT16HQ9Y5B9 1047 aaKnown RBP14.24□□□□□ -0.13
ZMYND8-220ENST00000617418 NCAPD3P42695 1498 aa14.22□□□□□ -0.13
ZMYND8-220ENST00000617418 IGF1RP08069 1367 aa14.21□□□□□ -0.13
ZMYND8-220ENST00000617418 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
ZMYND8-220ENST00000617418 BIVM-ERCC5R4GMW8 1640 aa14.19□□□□□ -0.14
ZMYND8-220ENST00000617418 CFTRP13569 1480 aa14.18□□□□□ -0.14
ZMYND8-220ENST00000617418 TRIM52Q96A61 297 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms